mRNA_E-fasciculatus_F_contig14764.3405.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: D7FUN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN6_ECTSI) HSP 1 Score: 169 bits (427), Expect = 9.700e-47 Identity = 82/93 (88.17%), Postives = 85/93 (91.40%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER*V---GWLIE 271
+VHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLR++PAPGI WEAGVLAPLLETVGTGDVNEVAER WL E
Sbjct: 373 EVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRRNPAPGIDWEAGVLAPLLETVGTGDVNEVAERLACLQNWLSE 465
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: A0A830BBE2_9LAMI (Probable zinc protease pqql n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BBE2_9LAMI) HSP 1 Score: 75.5 bits (184), Expect = 6.120e-14 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
+V R+ VHGFS+RE+S+A+ ++EI ++ RDQ S+NL DY++HFLR P GI +EA + LL + +V++ +E
Sbjct: 373 EVVRVHVHGFSEREISVARAFLMSEIESAYLERDQMQSSNLRDDYIQHFLRNEPVVGIEYEAQLHKTLLPYISASEVSKYSEN 455
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: UPI000CECF777 (zinc protease PQQL-like n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CECF777) HSP 1 Score: 75.5 bits (184), Expect = 6.210e-14 Identity = 33/83 (39.76%), Postives = 54/83 (65.06%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
++ R+++HGFSDREVSI + ++EI ++ RDQ S +L +Y++HFLR P GI +EA + LL + D+++ AE+
Sbjct: 371 EIARVRLHGFSDREVSIVRAQLMSEIESAYLERDQMQSTSLRDEYLQHFLRDEPVIGIEYEAQLQKTLLPQISASDLSKYAEK 453
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: A0A022RMA6_ERYGU (Uncharacterized protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RMA6_ERYGU) HSP 1 Score: 75.1 bits (183), Expect = 8.470e-14 Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
+V R++VHGFS+RE+S+A+ ++EI ++ RDQ S+NL +Y++HFLR P GI +EA + +L + +V++ +E
Sbjct: 373 EVARVRVHGFSEREISVARALLMSEIESAYLERDQMQSSNLRDEYIQHFLRNEPVVGIEYEAQLHKTILPHISVSEVSQYSEN 455
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: A0A2G9GCS2_9LAMI (C-terminal processing peptidase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GCS2_9LAMI) HSP 1 Score: 74.7 bits (182), Expect = 1.120e-13 Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
+V R++ HGFS+RE+S+A+ ++EI ++ RDQT S N +Y++HFLR P GI +EA + LL + +V++ +E
Sbjct: 373 EVARVRTHGFSEREISVARSLLMSEIESAYLERDQTQSTNFRDEYIQHFLRNEPVVGIEYEAQLHKTLLPYISASEVSKYSEN 455
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: A0A2P5A702_PARAD (Coenzyme PQQ biosynthesis protein n=5 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5A702_PARAD) HSP 1 Score: 73.9 bits (180), Expect = 2.160e-13 Identity = 32/83 (38.55%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
+V R+++HGFS+REV+I + ++EI ++ RDQ S++L +Y++HFLR P GI +EA + LL + D+++ AE+
Sbjct: 371 EVARVRIHGFSEREVTIVRAQLMSEIESAYLERDQMQSSSLQDEYLQHFLRNEPVIGIEYEAQLQKTLLPYISASDLSKYAEK 453
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: UPI0010356EE7 (zinc protease PQQL-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010356EE7) HSP 1 Score: 70.1 bits (170), Expect = 2.410e-13 Identity = 29/83 (34.94%), Postives = 53/83 (63.86%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
+V R+++HGFS+RE+S+A+ ++EI ++ RDQ S +L +Y++HFLR P G+ +EA + +L + +V++ E
Sbjct: 48 EVARVRLHGFSEREISVARALLMSEIESAYLERDQMQSTSLRDEYLQHFLRSEPVVGVEYEAQLQKTILPHISASEVSKYVEN 130
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: A0A6I9U0X9_SESIN (zinc protease PQQL-like isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9U0X9_SESIN) HSP 1 Score: 73.2 bits (178), Expect = 4.030e-13 Identity = 32/83 (38.55%), Postives = 54/83 (65.06%), Query Frame = 2
Query: 2 QVHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
+V R+++HGFS+RE+SI++ ++EI ++ RDQ S NL +Y++HFLR P GI +EA + LL + +V++ +E
Sbjct: 373 EVARVRMHGFSEREISISRALLMSEIESAYLERDQMQSTNLRDEYIQHFLRNEPVVGIEYEAQLHKTLLPYISASEVSKYSEN 455
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: V4LG81_EUTSA (Uncharacterized protein n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=V4LG81_EUTSA) HSP 1 Score: 72.8 bits (177), Expect = 5.390e-13 Identity = 31/82 (37.80%), Postives = 53/82 (64.63%), Query Frame = 2
Query: 5 VHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
V R+++HGFS+RE+S+ + ++EI ++ RDQT S +L +Y++HFL P GI +EA + LL + DV++ +E+
Sbjct: 226 VARVRLHGFSEREISVVRALMMSEIESAFLERDQTQSTSLRDEYIQHFLHNEPVIGIEYEAQLQKTLLPQISASDVSKYSEK 307
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Match: A0A067KNB4_JATCU (Uncharacterized protein n=4 Tax=Jatropha curcas TaxID=180498 RepID=A0A067KNB4_JATCU) HSP 1 Score: 72.8 bits (177), Expect = 5.500e-13 Identity = 32/82 (39.02%), Postives = 54/82 (65.85%), Query Frame = 2
Query: 5 VHRIKVHGFSDREVSIAKKNHLAEIRGEWVARDQTDSNNLCSDYVEHFLRQHPAPGIGWEAGVLAPLLETVGTGDVNEVAER 250
V R+++HGFSDRE+SI + +AEI ++ RDQT S +L ++++HFLR P GI +EA + +L + +V++ +E+
Sbjct: 344 VARVRLHGFSDREISIVRSLLMAEIESAYLERDQTQSTSLRDEFLQHFLRNEPVVGIEYEAQLQKTILPQISALEVSQYSEK 425 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14764.3405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14764.3405.1 >prot_E-fasciculatus_F_contig14764.3405.1 ID=prot_E-fasciculatus_F_contig14764.3405.1|Name=mRNA_E-fasciculatus_F_contig14764.3405.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=92bp PGPSHQGAWLQRQRGIHSEEEPSRGDKGGVGGAGSDGLEQPLQRLRGALPback to top mRNA from alignment at E-fasciculatus_F_contig14764:60..552+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14764.3405.1 ID=mRNA_E-fasciculatus_F_contig14764.3405.1|Name=mRNA_E-fasciculatus_F_contig14764.3405.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=493bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14764:60..552+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14764:60..552+ >mRNA_E-fasciculatus_F_contig14764.3405.1 ID=mRNA_E-fasciculatus_F_contig14764.3405.1|Name=mRNA_E-fasciculatus_F_contig14764.3405.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=552bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14764:60..552+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |