mRNA_E-fasciculatus_F_contig1476.3401.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LU07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU07_ECTSI) HSP 1 Score: 150 bits (380), Expect = 2.840e-43 Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 3
Query: 21 MQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGHLDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
M+EN FL DFFGCVGFLP+TTK ++RETMVKIM SP+SLQQSAV ADCD+E DAIARG W QASERNQLP DPSTCTFWCAIALGAL
Sbjct: 1 MEENAFLSDFFGCVGFLPLTTKSHIRETMVKIMRSPASLQQSAVE-ADCDDERSYDAIARGAHWIQASERNQLPRDPSTCTFWCAIALGAL 90
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LCV1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV1_ECTSI) HSP 1 Score: 137 bits (346), Expect = 1.950e-37 Identity = 68/98 (69.39%), Postives = 76/98 (77.55%), Query Frame = 3
Query: 3 ATGLVGMQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGH-LDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
ATGLVGMQEN FL DFFGCVGFLP+TT ++RETMV IM +S QQS V G DCDE GH +A+A G D S+ S RNQ PMDPS CTFWCA+ALGAL
Sbjct: 18 ATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRETMVTIMLPRASSQQS-VFGDDCDEGGHYFEAVAPGGDLSKTSARNQFPMDPSACTFWCAVALGAL 114
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 138 bits (347), Expect = 5.170e-36 Identity = 67/97 (69.07%), Postives = 78/97 (80.41%), Query Frame = 3
Query: 3 ATGLVGMQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGHLDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
ATGLVGMQEN FL DFFGCVGF+P+T+ ++RETMV+IM SP+ LQQSA+ GA C E G + R W++ASERNQLPMD STCTFWCAIALGAL
Sbjct: 118 ATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGA-CSEVG---TMVRAPCWNEASERNQLPMDASTCTFWCAIALGAL 210
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LU09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI) HSP 1 Score: 135 bits (340), Expect = 2.280e-35 Identity = 65/97 (67.01%), Postives = 78/97 (80.41%), Query Frame = 3
Query: 3 ATGLVGMQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGHLDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
ATGLVGMQEN FL DFFGCVGF+P+T+ ++RETMVKIM SP+ LQQSA+ GA G + ++ R W++ASE+ QLPMDPSTCTFWCAIALGAL
Sbjct: 14 ATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSAIGGAF----GGVGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGAL 106
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LU13_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI) HSP 1 Score: 132 bits (333), Expect = 8.400e-35 Identity = 64/97 (65.98%), Postives = 76/97 (78.35%), Query Frame = 3
Query: 3 ATGLVGMQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGHLDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
A GLVGMQE+ FL DFFGCVGFLP+TT+ +RE MV+IM +P++LQ+ AV G CDEE DAIARG D ASE +Q PM+P +CTFWCAIALGAL
Sbjct: 113 AVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAV-GGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGAL 208
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LCV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV4_ECTSI) HSP 1 Score: 128 bits (322), Expect = 2.710e-34 Identity = 64/98 (65.31%), Postives = 74/98 (75.51%), Query Frame = 3
Query: 3 ATGLVGMQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGH-LDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
ATGLV MQEN FL DFFGC+GFLP+TT +RETMVKIM P+S QQS V G D+ GH +A+A G D S+ S +QLPMDPS CTFWCA+ALGAL
Sbjct: 14 ATGLVEMQENTFLSDFFGCIGFLPLTTPSQIRETMVKIMVPPASSQQS-VFGDGSDKRGHYFEAVAPGGDLSKISAGSQLPMDPSACTFWCAVALGAL 110
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LU05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU05_ECTSI) HSP 1 Score: 131 bits (330), Expect = 4.130e-34 Identity = 67/91 (73.63%), Postives = 74/91 (81.32%), Query Frame = 3
Query: 21 MQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGHLDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
M+EN FL DFFGCVGFLP+TT ++RETMVKIMT PSSLQQSAV GAD E +D A G + +ASERNQLPMDPSTCTFWCAIALGAL
Sbjct: 1 MEENAFLSDFFGCVGFLPLTTTSHIRETMVKIMTPPSSLQQSAV-GAD---ERSVDTNAPGANLIKASERNQLPMDPSTCTFWCAIALGAL 87
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D7FZI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI7_ECTSI) HSP 1 Score: 123 bits (309), Expect = 1.360e-32 Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 3
Query: 21 MQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGHLDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
MQE+ FL DFFGCVGF P+ T+ +R +MVKIMT+ QS+ VG D E+G DAI RG DWS+ASE +Q+PM+PS+CTFWCAIALGAL
Sbjct: 1 MQESAFLSDFFGCVGFFPLATQSEIRASMVKIMTT----LQSSAVGGDFGEQGRFDAIVRGADWSKASEGHQIPMNPSSCTFWCAIALGAL 87
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LCW5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI) HSP 1 Score: 126 bits (317), Expect = 3.980e-32 Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 3
Query: 21 MQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGH-LDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
MQEN FL DFFGC GFLP+ T ++RETMVKIM P+S QQ V+G DCDE GH +A+ARG D S+ S N+LPMDPS CTFWCA+ALGAL
Sbjct: 1 MQENAFLSDFFGCNGFLPLATPSHIRETMVKIMLPPASSQQP-VLGDDCDEGGHYFEAVARGGDLSKTSAGNRLPMDPSACTFWCAVALGAL 91
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI) HSP 1 Score: 123 bits (309), Expect = 5.660e-31 Identity = 60/97 (61.86%), Postives = 72/97 (74.23%), Query Frame = 3
Query: 3 ATGLVGMQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDEEGHLDAIARGVDWSQASERNQLPMDPSTCTFWCAIALGAL 293
ATGLVGMQEN FL DFFGCVGFLP+TT+ ++RETMV IM SP+ Q + VG D G D+IA GV+WS+AS +QLPM+PSTCTFW +G L
Sbjct: 117 ATGLVGMQENAFLSDFFGCVGFLPLTTQSHIRETMVNIMVSPAIRQ--SFVGGDFGAGGPFDSIAGGVEWSKASGGHQLPMNPSTCTFWAWAIMGYL 211 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1476.3401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1476.3401.1 >prot_E-fasciculatus_F_contig1476.3401.1 ID=prot_E-fasciculatus_F_contig1476.3401.1|Name=mRNA_E-fasciculatus_F_contig1476.3401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=91bp MQENVFLGDFFGCVGFLPITTKRYVRETMVKIMTSPSSLQQSAVVGADCDback to top mRNA from alignment at E-fasciculatus_F_contig1476:15485..15978+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1476.3401.1 ID=mRNA_E-fasciculatus_F_contig1476.3401.1|Name=mRNA_E-fasciculatus_F_contig1476.3401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=494bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1476:15485..15978+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1476:15485..15978+ >mRNA_E-fasciculatus_F_contig1476.3401.1 ID=mRNA_E-fasciculatus_F_contig1476.3401.1|Name=mRNA_E-fasciculatus_F_contig1476.3401.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=546bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1476:15485..15978+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |