mRNA_E-fasciculatus_F_contig14754.3396.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: D7FYR3_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR3_ECTSI) HSP 1 Score: 408 bits (1048), Expect = 1.140e-137 Identity = 217/252 (86.11%), Postives = 222/252 (88.10%), Query Frame = 1
Query: 1 APATVQFQDWLLQVATRVAFDVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXRQARASLVVLECPPSLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEAARE 756
APAT QFQDWLLQVATRVAFD KEXXXXXXXX RQ VVLECPPSLDKAGRTEVHG FR+HMAYFSTTA+MPAARPK+AGGGDEFGAP P+VPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRL+IKRARLSYAGAKDRRALTAQKMRCWRLPAE IHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPP GGWGRGEAARE
Sbjct: 152 APATAQFQDWLLQVATRVAFDAKEXXXXXXXXDGVGGPIDVLLPPPEPP--RQ-----VVLECPPSLDKAGRTEVHGTFRNHMAYFSTTAIMPAARPKMAGGGDEFGAPPPMVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLYIKRARLSYAGAKDRRALTAQKMRCWRLPAEAIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPSGGWGRGEAARE 396
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A836CLL9_9STRA (TRUD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA) HSP 1 Score: 153 bits (387), Expect = 9.160e-39 Identity = 84/190 (44.21%), Postives = 114/190 (60.00%), Query Frame = 1
Query: 166 ASLVVLECPPSLDKAGRTEVHGAFRSHMAYFSTTALM---PAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPG 726
A+ ++L CP +DKAGRT +H F+S Y T ++ + P A ++ A +P+ + L+ K R WP+GR EYLEFS+YKAGR T E +AL + L +KR R SYAG+KDRRA TAQK+RCWRL AE + AD + ++GLAVSD Y ++L LG L+GN F V + P G
Sbjct: 161 AARLLLTCPADMDKAGRTGLHSLFKSLFGYLETKTVLGQPQESAPAEAAAEEDADASTPVATPAAALELQYK-PPSKGRRGWPRGRPEYLEFSLYKAGRGTHEAIDALSRVLRVKRTRFSYAGSKDRRAFTAQKVRCWRLEAEEL--VAADAAMQKEGLAVSDLCYKPSELGLGQLRGNRFTVGVSLPEG 347
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A8H7UBZ9_9FUNG (TRUD domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UBZ9_9FUNG) HSP 1 Score: 90.5 bits (223), Expect = 4.970e-17 Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 1
Query: 187 CPPSLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEV-----SFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 714
CPP DK RTE H F+ H LM + DG + + +KR + + G YL+FS+YK + T E +C+ + LSYAG KDRRA+T Q + + AE + A + +L++ G+ V++++YV+ L LG LKGN F ++LR
Sbjct: 161 CPPQDDKQQRTETHQLFKEHFK----NKLMTTTQ-------------------DGSIVVRWWRPSDKNDKRTMKDEFEALGGTYLQFSLYKENKDTMEAVNTICKTCRLAPKSLSYAGTKDRRAITVQNVTAYHALAEKL--ARSQEVLNRQGIYVANFKYVKNALKLGDLKGNRFGIVLR 316
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A507DQS8_9FUNG (TRUD domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DQS8_9FUNG) HSP 1 Score: 89.7 bits (221), Expect = 9.090e-17 Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 1
Query: 193 PSLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGL-LSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 714
P +K+ R ++HGAF SHM + T + R ++ GG E P +R+ R +W + G Y F +YK R T + +A+ + + + RL++AG KD+R +T+Q R+ AE I+ GL S G+ + ++ Y E+ L LG L+GN F+++LR
Sbjct: 150 PEKEKSTRAKIHGAFNSHMKGVAYTTTVENDRIEVKWGGGERRGRGGNKP------------QRQQRKTWDELGGRYCHFVLYKENRETVQSLQAIAKAIKVPTKRLTFAGTKDKRGVTSQ-----RVAAEHIYAEQLAGLNKSMKGIQMGNFSYQESGLKLGQLQGNQFEIVLR 307
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A6A6Q1P1_9PEZI (Pseudouridine synthase (Fragment) n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q1P1_9PEZI) HSP 1 Score: 86.7 bits (213), Expect = 1.070e-15 Identity = 62/175 (35.43%), Postives = 84/175 (48.00%), Query Frame = 1
Query: 202 DKAGRTEVHGAFRSHMAYFSTTALMPAARP----KIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 714
DKA RTE H A R + TA MP K A GA +PI + + +K + W + GEYL FS+YK + T EV + RL + +AG KDRRA+T Q++ +R+ AE I E + + G V D+ Y + L LG LKGN F + LR
Sbjct: 170 DKAKRTEAHVAVRRIFSSKLETATMPETPGVISIKAASTRGPSGARAPINVDGSGAF-------QKGKIGWNELGGEYLHFSLYKENKDTMEVLYHIASRLKVPVKNFQFAGTKDRRAVTVQRVAIFRVHAERIAEVNK----TARGWRVGDFEYKKHGLELGELKGNEFLLTLR 333
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A812C0Z6_SEPPH (TruD n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C0Z6_SEPPH) HSP 1 Score: 85.9 bits (211), Expect = 1.900e-15 Identity = 54/174 (31.03%), Postives = 82/174 (47.13%), Query Frame = 1
Query: 202 DKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEK---RKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 714
DKA RT++H A R G S K ++V F R SR+SWP+ RG Y +F +YK + T + + ++L IK + Y+G KDRRA T+Q + +R P + ++E + D L + ++ YV+ L LG L GN F ++LR
Sbjct: 183 DKAERTKIHQAIRDGF----------------------LGLESTTEERGDKRVIKVVFRNSNSRNSRSSWPRDRGNYCKFVLYKENKDTMDAINLIAKKLRIKPGQFQYSGTKDRRAKTSQHITVFRTPIKRLYELNKD----LKNLCLGNFSYVDECLKLGQLLGNRFIIVLR 330
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A425BJF1_9PEZI (TRUD domain-containing protein n=1 Tax=Scytalidium sp. 3C TaxID=2487125 RepID=A0A425BJF1_9PEZI) HSP 1 Score: 84.7 bits (208), Expect = 5.280e-15 Identity = 62/182 (34.07%), Postives = 89/182 (48.90%), Query Frame = 1
Query: 193 PSLDKAGRTEVHG----AFRSHMAYFS----TTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 714
P D+A R ++H F+SH+ S T + A R + GA D L + K + W + GEYL F++YK + T EV LC+ L IK S+AG KDRR +T Q++ +R AE I +A++ S G + D++Y + L LG L+GNHF V LR
Sbjct: 291 PIKDRAYRGQIHQNIRRIFQSHLETESLDDGTIKITAAPRNRRNPQNRNNGASRRSEGRDRSGNL-IPKNLTKGKLGWQELGGEYLHFTLYKENKDTMEVISYLCKILRIKPKDFSFAGTKDRRGVTVQRVSVFRQYAENIAKANS----SLRGAYIGDFKYEKHGLELGELQGNHFQVTLR 467
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A7S1MQL5_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MQL5_NEODS) HSP 1 Score: 82.0 bits (201), Expect = 8.870e-15 Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 1
Query: 190 PPSLDKAGRTEVHGAFRSHMAYFS-TTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 714
PP DKA RT VH A ++ +A +A R I GG R+ RA WP+GRGE+L F++YK T + +L+I + RL +AG KD+R +T Q++ C L + + + D+ + L+LG L+GN F +++R
Sbjct: 94 PPIDDKAQRTAVHQAVKAALAAHGFESATGDGGRVLIQRGGGRGVGGXXXXXXXXXXXXXXXANWRQDRA-WPEGRGEHLHFTLYKENLDTGSALRGIATKLNINQRRLCFAGTKDKRGVTTQRVSCRFLDPQRVASLNGQSFGRNAAALFGDFSFESDGLNLGRLEGNQFTIVVR 268
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A023GLE8_AMBTT (TRUD domain-containing protein n=2 Tax=Amblyomma TaxID=6942 RepID=A0A023GLE8_AMBTT) HSP 1 Score: 82.8 bits (203), Expect = 1.990e-14 Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 346 DGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 714
DG V + S +R+ A WP GR Y F +YK T E + L ++ + L YAG KD+RA T Q++ C RLPA+ + E L + G+ V + + +T + LG L+GN F ++LR
Sbjct: 131 DGTVRVSRSTAQRRRAAPWPSGRPSYTTFVLYKENMDTIEAVNRIATFLGMRPSCLGYAGTKDKRAKTCQRLSCHRLPAKKLLE-----LNRRQGIRVGNITFEDTAIKLGDLQGNRFAIVLR 248
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: UPI001E1DBA27 (pseudouridylate synthase 7 homolog isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBA27) HSP 1 Score: 81.3 bits (199), Expect = 7.180e-14 Identity = 50/179 (27.93%), Postives = 80/179 (44.69%), Query Frame = 1
Query: 196 SLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRA--SWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPG 726
S DK+ R ++HGA + +T+ V D + Y+E + WPKGRG+Y F +YK + T + + ++ +K + YAG KD+RA T+Q++ +R+ AE + + + + +Y Y L LG LKGN F V+LR G
Sbjct: 192 SEDKSVRAKLHGAIETGFPGINTS----------------------TVTKDDQKYIEARITNNQGNGLRKWPKGRGDYCRFVLYKEAKDTMDAIGLISGKMRLKTSLFQYAGTKDKRAKTSQEITVYRVAAEKLKDVNKQ----LRNIVTGNYSYTSDKLKLGQLKGNKFTVVLRSVTG 344 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14754.3396.1 >prot_E-fasciculatus_F_contig14754.3396.1 ID=prot_E-fasciculatus_F_contig14754.3396.1|Name=mRNA_E-fasciculatus_F_contig14754.3396.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp APATVQFQDWLLQVATRVAFDVKEEEEEEERRGGGGGGGPIDVLLPPPEPback to top mRNA from alignment at E-fasciculatus_F_contig14754:472..3025+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14754.3396.1 ID=mRNA_E-fasciculatus_F_contig14754.3396.1|Name=mRNA_E-fasciculatus_F_contig14754.3396.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2554bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14754:472..3025+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14754:472..3025+ >mRNA_E-fasciculatus_F_contig14754.3396.1 ID=mRNA_E-fasciculatus_F_contig14754.3396.1|Name=mRNA_E-fasciculatus_F_contig14754.3396.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1512bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14754:472..3025+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |