prot_E-fasciculatus_F_contig14754.3396.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14754.3396.1
Unique Nameprot_E-fasciculatus_F_contig14754.3396.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length252
Homology
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: D7FYR3_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYR3_ECTSI)

HSP 1 Score: 408 bits (1048), Expect = 1.140e-137
Identity = 217/252 (86.11%), Postives = 222/252 (88.10%), Query Frame = 0
Query:    1 APATVQFQDWLLQVATRVAFDVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXRQARASLVVLECPPSLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEAARE 252
            APAT QFQDWLLQVATRVAFD KEXXXXXXXX                   RQ     VVLECPPSLDKAGRTEVHG FR+HMAYFSTTA+MPAARPK+AGGGDEFGAP P+VPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRL+IKRARLSYAGAKDRRALTAQKMRCWRLPAE IHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPP GGWGRGEAARE
Sbjct:  152 APATAQFQDWLLQVATRVAFDAKEXXXXXXXXDGVGGPIDVLLPPPEPP--RQ-----VVLECPPSLDKAGRTEVHGTFRNHMAYFSTTAIMPAARPKMAGGGDEFGAPPPMVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLYIKRARLSYAGAKDRRALTAQKMRCWRLPAEAIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPSGGWGRGEAARE 396          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A836CLL9_9STRA (TRUD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL9_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.160e-39
Identity = 84/190 (44.21%), Postives = 114/190 (60.00%), Query Frame = 0
Query:   56 ASLVVLECPPSLDKAGRTEVHGAFRSHMAYFSTTALM---PAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPG 242
            A+ ++L CP  +DKAGRT +H  F+S   Y  T  ++     + P  A   ++  A +P+      + L+      K R  WP+GR EYLEFS+YKAGR T E  +AL + L +KR R SYAG+KDRRA TAQK+RCWRL AE +    AD  + ++GLAVSD  Y  ++L LG L+GN F V +  P G
Sbjct:  161 AARLLLTCPADMDKAGRTGLHSLFKSLFGYLETKTVLGQPQESAPAEAAAEEDADASTPVATPAAALELQYK-PPSKGRRGWPRGRPEYLEFSLYKAGRGTHEAIDALSRVLRVKRTRFSYAGSKDRRAFTAQKVRCWRLEAEEL--VAADAAMQKEGLAVSDLCYKPSELGLGQLRGNRFTVGVSLPEG 347          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A8H7UBZ9_9FUNG (TRUD domain-containing protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UBZ9_9FUNG)

HSP 1 Score: 90.5 bits (223), Expect = 4.970e-17
Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 0
Query:   63 CPPSLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEV-----SFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 238
            CPP  DK  RTE H  F+ H        LM   +                   DG + +         +KR  +  +    G YL+FS+YK  + T E    +C+   +    LSYAG KDRRA+T Q +  +   AE +  A +  +L++ G+ V++++YV+  L LG LKGN F ++LR
Sbjct:  161 CPPQDDKQQRTETHQLFKEHFK----NKLMTTTQ-------------------DGSIVVRWWRPSDKNDKRTMKDEFEALGGTYLQFSLYKENKDTMEAVNTICKTCRLAPKSLSYAGTKDRRAITVQNVTAYHALAEKL--ARSQEVLNRQGIYVANFKYVKNALKLGDLKGNRFGIVLR 316          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A507DQS8_9FUNG (TRUD domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DQS8_9FUNG)

HSP 1 Score: 89.7 bits (221), Expect = 9.090e-17
Identity = 55/175 (31.43%), Postives = 90/175 (51.43%), Query Frame = 0
Query:   65 PSLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGL-LSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 238
            P  +K+ R ++HGAF SHM   + T  +   R ++  GG E        P            +R+ R +W +  G Y  F +YK  R T +  +A+ + + +   RL++AG KD+R +T+Q     R+ AE I+     GL  S  G+ + ++ Y E+ L LG L+GN F+++LR
Sbjct:  150 PEKEKSTRAKIHGAFNSHMKGVAYTTTVENDRIEVKWGGGERRGRGGNKP------------QRQQRKTWDELGGRYCHFVLYKENRETVQSLQAIAKAIKVPTKRLTFAGTKDKRGVTSQ-----RVAAEHIYAEQLAGLNKSMKGIQMGNFSYQESGLKLGQLQGNQFEIVLR 307          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A6A6Q1P1_9PEZI (Pseudouridine synthase (Fragment) n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6Q1P1_9PEZI)

HSP 1 Score: 86.7 bits (213), Expect = 1.070e-15
Identity = 62/175 (35.43%), Postives = 84/175 (48.00%), Query Frame = 0
Query:   68 DKAGRTEVHGAFRSHMAYFSTTALMPAARP----KIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 238
            DKA RTE H A R   +    TA MP        K A      GA +PI  +    +       +K +  W +  GEYL FS+YK  + T EV   +  RL +      +AG KDRRA+T Q++  +R+ AE I E +     +  G  V D+ Y +  L LG LKGN F + LR
Sbjct:  170 DKAKRTEAHVAVRRIFSSKLETATMPETPGVISIKAASTRGPSGARAPINVDGSGAF-------QKGKIGWNELGGEYLHFSLYKENKDTMEVLYHIASRLKVPVKNFQFAGTKDRRAVTVQRVAIFRVHAERIAEVNK----TARGWRVGDFEYKKHGLELGELKGNEFLLTLR 333          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A812C0Z6_SEPPH (TruD n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C0Z6_SEPPH)

HSP 1 Score: 85.9 bits (211), Expect = 1.900e-15
Identity = 54/174 (31.03%), Postives = 82/174 (47.13%), Query Frame = 0
Query:   68 DKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEK---RKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 238
            DKA RT++H A R                          G  S       K  ++V F     R SR+SWP+ RG Y +F +YK  + T +    + ++L IK  +  Y+G KDRRA T+Q +  +R P + ++E + D       L + ++ YV+  L LG L GN F ++LR
Sbjct:  183 DKAERTKIHQAIRDGF----------------------LGLESTTEERGDKRVIKVVFRNSNSRNSRSSWPRDRGNYCKFVLYKENKDTMDAINLIAKKLRIKPGQFQYSGTKDRRAKTSQHITVFRTPIKRLYELNKD----LKNLCLGNFSYVDECLKLGQLLGNRFIIVLR 330          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A425BJF1_9PEZI (TRUD domain-containing protein n=1 Tax=Scytalidium sp. 3C TaxID=2487125 RepID=A0A425BJF1_9PEZI)

HSP 1 Score: 84.7 bits (208), Expect = 5.280e-15
Identity = 62/182 (34.07%), Postives = 89/182 (48.90%), Query Frame = 0
Query:   65 PSLDKAGRTEVHG----AFRSHMAYFS----TTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 238
            P  D+A R ++H      F+SH+   S    T  +  A R +        GA       D    L +     K +  W +  GEYL F++YK  + T EV   LC+ L IK    S+AG KDRR +T Q++  +R  AE I +A++    S  G  + D++Y +  L LG L+GNHF V LR
Sbjct:  291 PIKDRAYRGQIHQNIRRIFQSHLETESLDDGTIKITAAPRNRRNPQNRNNGASRRSEGRDRSGNL-IPKNLTKGKLGWQELGGEYLHFTLYKENKDTMEVISYLCKILRIKPKDFSFAGTKDRRGVTVQRVSVFRQYAENIAKANS----SLRGAYIGDFKYEKHGLELGELQGNHFQVTLR 467          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A7S1MQL5_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1MQL5_NEODS)

HSP 1 Score: 82.0 bits (201), Expect = 8.870e-15
Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 0
Query:   64 PPSLDKAGRTEVHGAFRSHMAYFS-TTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 238
            PP  DKA RT VH A ++ +A     +A     R  I  GG                        R+ RA WP+GRGE+L F++YK    T      +  +L+I + RL +AG KD+R +T Q++ C  L  + +   +             D+ +    L+LG L+GN F +++R
Sbjct:   94 PPIDDKAQRTAVHQAVKAALAAHGFESATGDGGRVLIQRGGGRGVGGXXXXXXXXXXXXXXXANWRQDRA-WPEGRGEHLHFTLYKENLDTGSALRGIATKLNINQRRLCFAGTKDKRGVTTQRVSCRFLDPQRVASLNGQSFGRNAAALFGDFSFESDGLNLGRLEGNQFTIVVR 268          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: A0A023GLE8_AMBTT (TRUD domain-containing protein n=2 Tax=Amblyomma TaxID=6942 RepID=A0A023GLE8_AMBTT)

HSP 1 Score: 82.8 bits (203), Expect = 1.990e-14
Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 0
Query:  116 DGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLR 238
            DG V +  S  +R+  A WP GR  Y  F +YK    T E    +   L ++ + L YAG KD+RA T Q++ C RLPA+ + E     L  + G+ V +  + +T + LG L+GN F ++LR
Sbjct:  131 DGTVRVSRSTAQRRRAAPWPSGRPSYTTFVLYKENMDTIEAVNRIATFLGMRPSCLGYAGTKDKRAKTCQRLSCHRLPAKKLLE-----LNRRQGIRVGNITFEDTAIKLGDLQGNRFAIVLR 248          
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Match: UPI001E1DBA27 (pseudouridylate synthase 7 homolog isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DBA27)

HSP 1 Score: 81.3 bits (199), Expect = 7.180e-14
Identity = 50/179 (27.93%), Postives = 80/179 (44.69%), Query Frame = 0
Query:   66 SLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIAGGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRA--SWPKGRGEYLEFSVYKAGRSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEAHADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPG 242
            S DK+ R ++HGA  +     +T+                       V  D + Y+E      +      WPKGRG+Y  F +YK  + T +    +  ++ +K +   YAG KD+RA T+Q++  +R+ AE + + +         +   +Y Y    L LG LKGN F V+LR   G
Sbjct:  192 SEDKSVRAKLHGAIETGFPGINTS----------------------TVTKDDQKYIEARITNNQGNGLRKWPKGRGDYCRFVLYKEAKDTMDAIGLISGKMRLKTSLFQYAGTKDKRAKTSQEITVYRVAAEKLKDVNKQ----LRNIVTGNYSYTSDKLKLGQLKGNKFTVVLRSVTG 344          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14754.3396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYR3_ECTSI1.140e-13786.11Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A836CLL9_9STRA9.160e-3944.21TRUD domain-containing protein n=1 Tax=Tribonema m... [more]
A0A8H7UBZ9_9FUNG4.970e-1731.49TRUD domain-containing protein n=1 Tax=Umbelopsis ... [more]
A0A507DQS8_9FUNG9.090e-1731.43TRUD domain-containing protein n=1 Tax=Synchytrium... [more]
A0A6A6Q1P1_9PEZI1.070e-1535.43Pseudouridine synthase (Fragment) n=1 Tax=Neohorta... [more]
A0A812C0Z6_SEPPH1.900e-1531.03TruD n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0... [more]
A0A425BJF1_9PEZI5.280e-1534.07TRUD domain-containing protein n=1 Tax=Scytalidium... [more]
A0A7S1MQL5_NEODS8.870e-1529.55Hypothetical protein (Fragment) n=1 Tax=Neobodo de... [more]
A0A023GLE8_AMBTT1.990e-1436.59TRUD domain-containing protein n=2 Tax=Amblyomma T... [more]
UPI001E1DBA277.180e-1427.93pseudouridylate synthase 7 homolog isoform X1 n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001656Pseudouridine synthase, TruDPFAMPF01142TruDcoord: 135..238
e-value: 2.7E-16
score: 59.4
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 64..238
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 119..248
e-value: 2.1E-25
score: 90.8
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 131..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14754contigE-fasciculatus_F_contig14754:472..3025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14754.3396.1mRNA_E-fasciculatus_F_contig14754.3396.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14754 472..3025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14754.3396.1 ID=prot_E-fasciculatus_F_contig14754.3396.1|Name=mRNA_E-fasciculatus_F_contig14754.3396.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=252bp
APATVQFQDWLLQVATRVAFDVKEEEEEEERRGGGGGGGPIDVLLPPPEP
PRQARASLVVLECPPSLDKAGRTEVHGAFRSHMAYFSTTALMPAARPKIA
GGGDEFGAPSPIVPNDGKVYLEVSFEKRKSRASWPKGRGEYLEFSVYKAG
RSTSEVAEALCQRLHIKRARLSYAGAKDRRALTAQKMRCWRLPAETIHEA
HADGLLSQDGLAVSDYRYVETDLSLGGLKGNHFDVLLRPPPGGWGRGEAA
RE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR042214TruD_catalytic
IPR001656PsdUridine_synth_TruD