mRNA_E-fasciculatus_F_contig1473.3385.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: D7FRE2_ECTSI (Checkpoint protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE2_ECTSI) HSP 1 Score: 258 bits (658), Expect = 1.240e-84 Identity = 131/134 (97.76%), Postives = 134/134 (100.00%), Query Frame = 1
Query: 19 AGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQVR 420
AGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQ+MLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPP+VHSPQV+
Sbjct: 16 AGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQDMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPKVHSPQVQ 149
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: A0A7S3YAY1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAY1_HETAK) HSP 1 Score: 132 bits (333), Expect = 3.370e-36 Identity = 61/134 (45.52%), Postives = 97/134 (72.39%), Query Frame = 1
Query: 19 AGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQVR 420
+G+I +EK+ CV++LTE+ + +S++ES + + V++E+ QE LF +YRIES + N IL E + L +AL SG+ +P CQ+KLAKR G+PCL++ETRALE+++ HD+PVK++ + ++L P V PQV+
Sbjct: 17 SGLISILEKVSQVCVIYLTESSMRISIKES-QDDIQVFSEISQERLFTDYRIESLSNNCILLEVGTANLGRALASGRRAPACQLKLAKRGGRPCLAVETRALEVDIAHDLPVKLLRPGDVRFHLAPEVPRPQVQ 149
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: A0A7S2SUZ2_9STRA (Checkpoint protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUZ2_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.150e-34 Identity = 67/135 (49.63%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 22 GVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDV--YAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQVR 420
GV +EKIG VVHL++T + L ++ +G DV ++ L Q+ LFH++RIES++GN IL + LL AL+S + +P CQ+KL KR GQ L +ETRALE++V+HDIPV VM A+E +YY PP V PQV+
Sbjct: 60 GVAATLEKIGPLGVVHLSDTSIQLCIRNDSGQGDDVLAFSALEQKELFHDWRIESQSGNCILLQLTLQNLLDALHSARNAPQCQLKLTKRNGQAALCLETRALEVDVIHDIPVTVMRASEYQYYCPPDVPQPQVQ 194
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: W7TDG5_9STRA (Checkpoint protein hus1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDG5_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.150e-32 Identity = 58/133 (43.61%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 22 GVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQVR 420
GV E+ G +C+++L+E + + + GS+ V ++E+ QE +F EYRI S A N+ILFE S L++A +S KT+ ++KLAKRAGQPC+ +E RAL++E++H++P++VM A + +YY+PP V P+V+
Sbjct: 17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRMKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQ 149
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: A0A4D9CSQ4_9STRA (Checkpoint protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSQ4_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.260e-32 Identity = 59/133 (44.36%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 22 GVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQVR 420
GV E+ G +C+++L+E + + + GS+ V ++E+ QE +F EYRI S A N+ILFE S L++A +S KT+ +IKLAKRAGQPC+ +E RAL++E++H++P++VM A + +YY+PP V P+V+
Sbjct: 17 GVAQCFERFGPSCLIYLSERSIRFASPKLGSDEVRAFSEIQQEKVFSEYRIASLANNSILFEIGLSNLIKAFSSAKTAHFVRIKLAKRAGQPCICLEARALDMELLHEVPIRVMRAADIQYYMPPDVAMPRVQ 149
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: A0A7S1TZY9_9STRA (Checkpoint protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY9_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.470e-29 Identity = 63/137 (45.99%), Postives = 87/137 (63.50%), Query Frame = 1
Query: 22 GVIGAIEKIGTAC----VVHLTETRVHLSVQESGSEGVDVYAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQVR 420
GVI +EK ++HL+ L++ + +E V+AEL + LF EYRIES++ + IL EA + L +A SG+ +P C +KL KR GQPCL +ETRALE++V HDIPVKV+ A E E Y PP V +P V+
Sbjct: 17 GVIMCLEKATAGATPTVLLHLSPGGAKLALPTASTEEPQVFAELAADKLFAEYRIESQSDDCILLEAGLANLARAFRSGRAAPLCLLKLTKRRGQPCLCLETRALEVDVTHDIPVKVLKAAEIEAYAPPEVPAPSVQ 153
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: A0A7R9U1B3_9STRA (Checkpoint protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1B3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.370e-18 Identity = 39/60 (65.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query: 241 SGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQVR 420
SG+T+P CQ+KL KR GQPCL +ETRALE++V HDIPVKV+ A+E E Y PP V SP V+
Sbjct: 2 SGRTAPLCQLKLTKRGGQPCLCLETRALEVDVTHDIPVKVLKASEIEAYAPPEVPSPTVQ 61
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: M4BAP0_HYAAE (Checkpoint protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAP0_HYAAE) HSP 1 Score: 77.0 bits (188), Expect = 3.810e-14 Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 1
Query: 52 TACVVHLTETRVHLSVQESGSEGVDVYAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRALEIEVVHDIPVKVMPANEAEYYLPPRVHSPQV 417
T CV +LT + ++++ G+E + ++ L LFH+ ++S+A N I F + L QAL+SGK + ++L KR G L + RA++I++V IP+KV+ + E Y P V +PQ+
Sbjct: 33 TNCVFNLTPQTLSIALKSGGAEELQSFSRLPITRLFHDVVVQSQAENHIGFLCDVRHLQQALSSGKDASAVMLRLLKRDGSNFLCLRMRAVDIDIVQSIPIKVVAMSTLEQYREPSVPAPQI 154
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: A0A433PQA6_9FUNG (Hus1-like protein-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQA6_9FUNG) HSP 1 Score: 64.7 bits (156), Expect = 2.660e-10 Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 1
Query: 19 AGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQEMLFHEYRIESRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSI-----ETRALEIEVVHDIPVKVMPANE 375
AGV ++E++ C++ LT RVH V G Q +F Y I+S A N I E LL+AL S + + +KL K+ G P LS+ +E+V DIPVKV+ N+
Sbjct: 25 AGVAQSVERLAKMCLLKLTRERVHFIVVADAEGGA-------QCSIFTNYHIDSAAENEIFLEFQVDYLLRALRSAQNAVDVMMKLTKKNGVPLLSLIMSHSSRGGKRLELVQDIPVKVLSPNQ 141
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Match: A0A2C9L6C6_BIOGL (Checkpoint protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9L6C6_BIOGL) HSP 1 Score: 63.9 bits (154), Expect = 1.280e-9 Identity = 42/134 (31.34%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 25 VIGAIEKIGTACVVHLTETRVHLSVQES-GSEGVDVYAELIQEMLFHEYRIE--SRAGNAILFEANASLLLQALNSGKTSPTCQIKLAKRAGQPCLSIETRAL-----EIEVVHDIPVKVMPANEAEYYLPPRV 402
++G I K+ C++ +TE +V + E G G ++ EL Q F EY ++ S N I E L+L+AL + ++ ++KL K+ PCL++E + +VVHDIPV V+P Y P +
Sbjct: 19 IVGTISKLVKTCIMRITEDKVFFILSERIGDGGAQMWCELDQSHFFDEYAMDGVSAEANEIYLEVMPDLMLKALKTAHSAKWIKLKLTKK-NTPCLTMEIDLPTGGPHQRQVVHDIPVNVVPRKHWPDYTEPEM 151 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1473.3385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1473.3385.1 >prot_E-fasciculatus_F_contig1473.3385.1 ID=prot_E-fasciculatus_F_contig1473.3385.1|Name=mRNA_E-fasciculatus_F_contig1473.3385.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=140bp MGHFRPAGVIGAIEKIGTACVVHLTETRVHLSVQESGSEGVDVYAELIQEback to top mRNA from alignment at E-fasciculatus_F_contig1473:1013..2717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1473.3385.1 ID=mRNA_E-fasciculatus_F_contig1473.3385.1|Name=mRNA_E-fasciculatus_F_contig1473.3385.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1705bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1473:1013..2717- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1473:1013..2717- >mRNA_E-fasciculatus_F_contig1473.3385.1 ID=mRNA_E-fasciculatus_F_contig1473.3385.1|Name=mRNA_E-fasciculatus_F_contig1473.3385.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=840bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1473:1013..2717- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |