mRNA_E-fasciculatus_F_contig14683.3358.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14683.3358.1
Unique NamemRNA_E-fasciculatus_F_contig14683.3358.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE)

HSP 1 Score: 665 bits (1717), Expect = 7.550e-226
Identity = 352/409 (86.06%), Postives = 366/409 (89.49%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARGAKVDSSPALRFLGKSRPAERCTASCGGVAPPS-GAGAGAPATVCDRSCYSGGELGARFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 1224
            SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATI+DFPYSWPLWQR+SRKFVA+DLIANVGFQD+DQQAVLKAVAS+TLFIHGSLTGGGGSMFHA GAK DSSPALRFLGK+RP ERCTASCGG APPS G GAGA ATVCDRSCYSGGELGARFGGYLCGAGD+ EYG HCRTCFTD+EEAQAAEE+LAEEE+AAMRGR FKM  D EK+RRVLRADDGPEG+AGWVEG EG   GDSRAVLRG+                         XXXXXXXXXXXXXXX ATGCS+KCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE
Sbjct:  244 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGGGAPPSSGVGAGALATVCDRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAMRGRSFKMPVDNEKSRRVLRADDGPEGAAGWVEGGEG---GDSRAVLRGN-RGGGAGVTRRMDAVDGGTDDEMVEXXXXXXXXXXXXXXXPATGCSNKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 648          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE)

HSP 1 Score: 403 bits (1036), Expect = 1.800e-125
Identity = 227/460 (49.35%), Postives = 278/460 (60.43%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARGAKVDSSPALRFLGKSRPAERCTASCGGVAP-------PSGAGAGAPATVCDRSCYSGGELGARFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGP----EGSAGWVEGEEGE--------GGGDSR--AVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEEDEWMPSITAEDDDGTIGXXXDAAADAEDGA 1317
            SFE+LY AAFGGVEPFW+KGS L   + HE VV  E+R  +GHINGNAIYNNTD  FV++VN+T+TRWEYT  YD ALWATI+DFPYSWPLWQR+SRKFV  +LIANVG  DVD + +L AVA  TLFIHG+ T GG SM                +G +  AERCT SCG   P       PSG      ATVCDRSCY+GG  GARFGG+LCGAGDVA YG HCRTCFTDL EA+AAE+ LA +ER  +   G   +G+     +  R+D+       G  GW + E GE        G  D+R    +                                            A+GCS +C    D VCDRSCGTGR+GDYNC WRGYG +CR+C+NDR +A+ AN VA++RGGSV+MC+TFEPPTE+++W   + AE     +    +A ADA++ A
Sbjct:  214 SFEELYTAAFGGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWEYTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVGVHDVDIRELLDAVAGGTLFIHGTPTDGGVSM----------------VGSNELAERCTVSCGFRFPNAHATMAPSGT-----ATVCDRSCYAGGRDGARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAEDTLALQERLVLEREGDTRTGNVA-FEKSWRSDEAAWTYGRGGEGWPQQEVGEQHVEGGVGGNRDNRERGAVGHQRQQGGVNIMEPKQDRDMNKVQPILEKQRHVIMCDTLMPPPAASGCSHQCHEMDDAVCDRSCGTGRHGDYNCNWRGYGKNCRYCYNDRLQAMAANVVARQRGGSVVMCNTFEPPTEDEDWESPVEAEKVRAMVKLDEEADADAQEKA 651          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 1.550e-90
Identity = 182/446 (40.81%), Postives = 229/446 (51.35%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARG---------------------AKVDSSPALRFLGKSRPAER-----CTASCG---------GVAPPSGAGAGAPATVCDRSCYSGGELGA---RFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 1224
            SFEKLY AAF  VEPFW+KGS L G NFH TV + ++ H+LGHINGNAIYNN+DPAF +FV +TL RW Y+ SYDVALWAT++DFPYSWPLWQR+S KFV+ +LIANVGF DVDQ+ V  A+AS+T+FIHGSLTGGGG+ F +                       A ++++ A   +G   P+ R     C   CG         G       G    ATVCD +  S    G+   + G + CGAGD   +G HCR C+ D EEA  A+  L  + R A           +E+   V+  D                        LR                                           A+ CS KC  K DT+CD  C +G +G+YNC WR +G  CRFCF+D   A+ A+  AKR GG VIMC+T EPP E
Sbjct:   73 SFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSTRLATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREA----------SEEQPHHVIMCD-----------------------TLR----------------------------------------PPEASTCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVE 445          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 1.250e-79
Identity = 178/482 (36.93%), Postives = 230/482 (47.72%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARG---------------------AKVDSSPALRFLGKSRPAER-----CTASCGGVAPPS--GAGAGAP-----ATVCDRSCYSGGELGA---RFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDT------------------------VCDRSCGTGRYGDYNCGWRGYGS--------------DCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 1224
            SFEKLY AAF  VEPFW+KGS L G NFH T  + ++  +LGHINGNAIYNN+DPAF +FV +TL RW Y+ SYDVALWAT++DFPYSWPLWQR+S KFV+ +LIANVGF DVDQ+ +  A+AS+T+FIHGSL+GGGG+ F +                       A ++++ A   +G   P+ R     C   CG        G G G       ATVCD +  S    G+   + G + CGAGD   +G HCR+C+ D EEA  A+  L  + R             + + R V+  D                        LR                                           A+ CS KC +K DT                        +CD  C +G +G+YNC WR +G+               CRFCF+D   A+ A+  AKR GG VIMC+T EPP E
Sbjct:   73 SFEKLYIAAFDVVEPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETLGNALASETMFIHGSLSGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSIRLATPECRTECGSTVSWDLLGGGGGEDGVMDIATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRILQNQAREV----------GEVQPRHVIMCD-----------------------TLR----------------------------------------PPEASTCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNTHEPPVE 481          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.300e-47
Identity = 171/469 (36.46%), Postives = 212/469 (45.20%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGG-SMFHAR--GAKVDSSPALRFLGKSRPA-------------------------------ERCTASCGGVAPPSGAGAGAPATVCDRSCYSGGELGARFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDT-----VCDRSCGTGR-YGDYNCGWRG--YGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPP-------TEEDEWMPSITAED 1260
            SFE+LY AAF   E FW+KGS LEG +FH      E  HVLGHINGNAIYNN DPAFVE+V YT  RW Y   YDVALW TI+DFPYSWPL+QRYS KFV  +LI++VG++ V+   V  AVA  TLFIHGS    G  + + A    A VD + + R L +  P                                E C   C   +       G    VCD +C S       +G   CGA +  +YG  CR C+ D E+A+  +       RA M     KM  D    RR+  AD+    S   +         D  A+ +                        XXXXXXXXXXX          GC   C+  +       VCD +C +   YG   CG +   YG+DCR C+ND E+A   +    R     IMC T  P        T  DE  P + A D
Sbjct:  152 SFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATEGDAAVDVATSQRQLTEDVPKWQAQEKWRNTSXXXXXXXXXXKKQYEDSSDEEGCMDGCEYTSKD-----GTRGRVCDSNCSSPNV----YGTLGCGAKN-GKYGADCRACYNDDEKARKQD---TPGNRAIMCS--TKMPVDVY-GRRLTPADE----SNPLLVAR------DLEALQKDEVHRQLSEDVPKWRAQEKWKNNTXXXXXXXXXXXKQYEDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNR----AIMCSTKMPVDVYGRRLTTADEVNPLLVARD 590          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 5.390e-45
Identity = 86/132 (65.15%), Postives = 97/132 (73.48%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGS 396
            SFE+LY AAF   E FW+KGS LEG +FH T    E   VLGHINGNAIYNN DPAFVE+V YT +RW Y   YDVALW TI+DFPYSWPL+QRYS KFV  +LI++VGF+ V    V  AVA  TLFIHGS
Sbjct:  154 SFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGFEHVGHDMVSDAVAGQTLFIHGS 285          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.230e-44
Identity = 84/131 (64.12%), Postives = 98/131 (74.81%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHG 393
            SFE+LY AAF   E FW+KGS LEG NFH + ++ +  HVLGHINGNAIYNN D AFVE+V+YT +RWEY   YDVALW TI+DFPYSWPL+QR+S KFV  +LIA VG   VD   V  A+A  TLFIHG
Sbjct:  163 SFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHG 293          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 3.620e-44
Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGS 396
            SFE+LY AAF   E FW+KGS LEG NFH +  + +   V+GHINGNAIYNN DPAF E+V+YT  R++Y   YDVALW TI+DFPYSWPL+QRYSRKFV  +LI+ VG++ VD   V  A+A  TLFIHGS
Sbjct:   95 SFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLISYVGYEHVDHDTVSDAIAGQTLFIHGS 226          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 5.180e-44
Identity = 83/131 (63.36%), Postives = 96/131 (73.28%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHG 393
            SFE+LY AAF   E FW+KGS LEG NFH + ++ +  HVLGHINGNAIYNN D AFVE+V+YT  RWE    YDVALW TI+DFPYSWPL+QR+S KFV  +LIA VG   VD   V  A+A  TLFIHG
Sbjct:   35 SFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNNDQAFVEYVDYTRARWEDNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHG 165          
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.090e-43
Identity = 84/132 (63.64%), Postives = 95/132 (71.97%), Query Frame = 1
Query:    1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGS 396
            SFE+LY AAF   E FW+KGS LEG +FH +    E   VLGHINGNAIYNN DPAFVE+V YT  RW Y   YDVALW TI+DFPYSWPL+QRYS KFV  +LI+ VG++ V    V  AVA  TLFIHGS
Sbjct:  151 SFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGYEHVSHDTVSDAVAGKTLFIHGS 282          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5KZV7_9PHAE7.550e-22686.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K6N3_9PHAE1.800e-12549.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LCC7_ECTSI1.550e-9040.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKY0_9PHAE1.250e-7936.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI37_ECTSI3.300e-4736.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FI39_ECTSI5.390e-4565.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSN3_9PHAE1.230e-4464.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FR80_ECTSI3.620e-4462.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LLE5_ECTSI5.180e-4463.36Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus T... [more]
D7FI63_ECTSI1.090e-4363.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14683contigE-fasciculatus_F_contig14683:671..3138 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.7
Seed ortholog evalue5.8e-45
Seed eggNOG ortholog2880.D7FI37
EggNOG OGs2D0G2@1,2SE3H@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size1338
Cds size1338
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14683.3358.1prot_E-fasciculatus_F_contig14683.3358.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14683 671..3138 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927952.339107-CDS-E-fasciculatus_F_contig14683:670..8121622927952.339107-CDS-E-fasciculatus_F_contig14683:670..812Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 671..812 -
1695995764.3067765-CDS-E-fasciculatus_F_contig14683:670..8121695995764.3067765-CDS-E-fasciculatus_F_contig14683:670..812Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 671..812 -
1622927952.3560863-CDS-E-fasciculatus_F_contig14683:1187..13391622927952.3560863-CDS-E-fasciculatus_F_contig14683:1187..1339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 1188..1339 -
1695995764.3165684-CDS-E-fasciculatus_F_contig14683:1187..13391695995764.3165684-CDS-E-fasciculatus_F_contig14683:1187..1339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 1188..1339 -
1622927952.3673508-CDS-E-fasciculatus_F_contig14683:1807..25391622927952.3673508-CDS-E-fasciculatus_F_contig14683:1807..2539Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 1808..2539 -
1695995764.3252335-CDS-E-fasciculatus_F_contig14683:1807..25391695995764.3252335-CDS-E-fasciculatus_F_contig14683:1807..2539Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 1808..2539 -
1622927952.3845258-CDS-E-fasciculatus_F_contig14683:2826..31381622927952.3845258-CDS-E-fasciculatus_F_contig14683:2826..3138Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 2827..3138 -
1695995764.3370304-CDS-E-fasciculatus_F_contig14683:2826..31381695995764.3370304-CDS-E-fasciculatus_F_contig14683:2826..3138Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14683 2827..3138 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14683.3358.1

>prot_E-fasciculatus_F_contig14683.3358.1 ID=prot_E-fasciculatus_F_contig14683.3358.1|Name=mRNA_E-fasciculatus_F_contig14683.3358.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=446bp
SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIY
NNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFV
AVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARGAKVDS
SPALRFLGKSRPAERCTASCGGVAPPSGAGAGAPATVCDRSCYSGGELGA
RFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFK
MSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGGGGARV
TRRMDAVYYRGADDEMVERRRHVIMCDTLMPPPPATGCSSKCQMKTDTVC
DRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMC
HTFEPPTEEDEWMPSITAEDDDGTIGGGDDAAADAEDGAAPKILT*
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mRNA from alignment at E-fasciculatus_F_contig14683:671..3138-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14683.3358.1 ID=mRNA_E-fasciculatus_F_contig14683.3358.1|Name=mRNA_E-fasciculatus_F_contig14683.3358.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2468bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14683:671..3138- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCTTTGAGAAGCTCTACGCCGCGGCGTTCGGAGGGGTGGAGCCCTTCTG GATCAAGGGGAGTACCCTGGAGGGCGTCAACTTTCACGAGACCGTCGTTC TTCCGGAGAGCCGGCACGTGCTGGGGCACATCAACGGCAACGCCATCTAC AACAACACCGACCCGGCCTTCGTGGAGTTCGTCAACTACACGCTCACGCG CTGGGAGTACACGCAGTCGTACGACGTGGCTCTGTGGGCCACGATCGCAG ACTTTCCTTACAGCTGGCCCTTGTGGCAGCGCTACTCGCGAAAATTCGTG GCGGTTGATCTGGTAAGCCGAGAGCCTGATTCGCCCTTCCGCTGCCAGTT GTAGGCCAACCCCCCCTCGGAGCGGCCCAGTTGCGCGCCCGTCAAAGGGA TGTATCAACACCAACAGCACCCTGTGTGTTGGGAGTACGTAGCTCTTGTA TGCGTCCACACTTTTTCTAGAATACCCCACTCGCTGATTTGCTGCGGCGC ACGCGCTCGCGCTCGTCACTGTATCCCAGCTGCCTGCCCCCTCAACTTGT CCCCCATCCCTGCCCGCGCCGTTCCCCTCGCGCGTGCGCCGCCGCACAGA TTGCAAACGTTGGGTTTCAGGACGTGGACCAGCAGGCGGTCCTGAAGGCG GTGGCGAGCGACACGCTCTTCATTCACGGCAGCCTGACGGGAGGGGGCGG GTCGATGTTTCACGCAAGGGGCGCGAAGGTGGATTCCTCGCCGGCGCTCC GGTTCCTTGGCAAGAGCCGGCCGGCGGAGAGGTGCACGGCATCCTGCGGG GGGGTGGCGCCGCCGTCCGGCGCCGGCGCCGGGGCGCCGGCCACCGTCTG CGACCGGTCGTGCTACTCCGGTGGCGAGCTCGGGGCGCGGTTCGGCGGCT ACCTGTGCGGGGCAGGGGATGTCGCGGAGTACGGCCCCCACTGCCGGACG TGCTTCACCGACCTGGAGGAGGCGCAGGCGGCGGAGGAGAGGCTGGCCGA AGAGGAGCGAGCGGCGATGCGGGGGAGAGGCTTCAAGATGTCCGGGGACA AGGAGAAGGCCAGGAGGGTTCTTAGGGCGGACGACGGGCCGGAGGGGAGC GCCGGATGGGTCGAGGGCGAGGAAGGAGAGGGGGGGGGGGATAGCCGGGC GGTGTTGAGGGGTAGCGGAGGCGGGGGCGCGAGAGTGACACGGCGGATGG ATGCCGTCTACTACCGCGGTGCCGACGACGAGATGGTCGAGAGGAGACGG CACGTGATCATGTGCGACACGCTGATGCCACCGCCCCCTGCCACGGGCTG CAGCAGCAAGTGTCAGATGAAGACGGATACGGTGAGTGACGTTGGTTGCT TTCGGTCGGGGCCGAAAGAGTTGGATTCCCGTGCAAGCCATGTCATGGGG TGGCTGCTGTGTGGCACGGCGTGCTATGATAGGATACCTTGGCGCAAGAC TGTTGCCGGTCGTCCCCGTCCACCTCCGGAGTACCGACGATCCCGCTGCT CCCAAAGGGTGTGCCTGCGTGCCGACCGAGCCGTTTGCCACAGCTGAGAC GCCCCCGAGGGAAGCGACGAATCATGACATGACCTAAGTCATTTGTTCGC CAGCAGTGTCGGCTCGGAGTAGTAAGAAGAACCGTGTGTTGCCCTCAAGC CTCTTGCTTTTTTTTCTGTCTCTCACATGTACCAAACGTGTACCGCTGCC ACGAAAAGCATCGCCCCATGTCAGGAGAGAGTTTACGCCTTGACACGCTT GCTTGACCGAGCAACTCAACCCCCGACCTCCCGTACCCCCCCCTGCAAGG TTTGTGACCGTAGTTGCGGGACGGGGCGGTACGGCGACTACAACTGCGGC TGGCGAGGCTACGGTTCGGACTGCCGGTTCTGCTTCAACGACCGCGAGGA GGCCCTGACGGCCAACGCTGTGGCCAAGCGAAGAGGGGGTTCCGTTATCA TGTGAGGGTCCACCGTCCGTCTGTTGGCCGTCCGCGAGGGCTGGGTCAGT CGCGGATGACATGCTCGTCTCACCTCGTGGCGGAACGTGTTGTCCCTCGG AAGAGCAGCAGAGAGTTTGGGGGGCGTCGGTGTCGTCTGTTGGCGTTTAC CTTGTGTTCCGCTACGTGTGTGCCTGTAAGACCCAAAAGTGCAGGCTTTC TTTCCCTGACCAATAAATGGCGTTCGCGTTTCAAATTGCAGGCCTTCTTT CCCTGGCCCAATAAACGGTGTTCGCGTTTCACGATCGTGCGCTGGATATG TAACGATATGTACAAAACAAAAAACACGTTCTCTTTGGCCTCTGCCTGCC TGCCTGCCTGCCGGCGTCTGCCGCAGGTGCCACACGTTCGAGCCGCCCAC GGAGGAAGACGAATGGATGCCTAGCATCACGGCGGAGGACGACGATGGCA CGATCGGTGGGGGCGATGACGCTGCTGCGGATGCCGAAGACGGAGCAGCT CCGAAAATCTTGACGTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14683:671..3138-

>mRNA_E-fasciculatus_F_contig14683.3358.1 ID=mRNA_E-fasciculatus_F_contig14683.3358.1|Name=mRNA_E-fasciculatus_F_contig14683.3358.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2676bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14683:671..3138- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
AGCTTTGAGAAGCTCTACGCCGCGGCGTTCGGAGGGGTGGAGCCCTTCTG
GATCAAGGGGAGTACCCTGGAGGGCGTCAACTTTCACGAGACCGTCGTTC
TTCCGGAGAGCCGGCACGTGCTGGGGCACATCAACGGCAACGCCATCTAC
AACAACACCGACCCGGCCTTCGTGGAGTTCGTCAACTACACGCTCACGCG
CTGGGAGTACACGCAGTCGTACGACGTGGCTCTGTGGGCCACGATCGCAG
ACTTTCCTTACAGCTGGCCCTTGTGGCAGCGCTACTCGCGAAAATTCGTG
GCGGTTGATCTGAGCTTTGAGAAGCTCTACGCCGCGGCGTTCGGAGGGGT
GGAGCCCTTCTGGATCAAGGGGAGTACCCTGGAGGGCGTCAACTTTCACG
AGACCGTCGTTCTTCCGGAGAGCCGGCACGTGCTGGGGCACATCAACGGC
AACGCCATCTACAACAACACCGACCCGGCCTTCGTGGAGTTCGTCAACTA
CACGCTCACGCGCTGGGAGTACACGCAGTCGTACGACGTGGCTCTGTGGG
CCACGATCGCAGACTTTCCTTACAGCTGGCCCTTGTGGCAGCGCTACTCG
CGAAAATTCGTGGCGGTTGATCTGATTGCAAACGTTGGGTTTCAGGACGT
GGACCAGCAGGCGGTCCTGAAGGCGGTGGCGAGCGACACGCTCTTCATTC
ACGGCAGCCTGACGGGAGGGGGCGGGTCGATGTTTCACGCAAGGGGCGCG
AAGGTGGATTCCTCGCCGGCGCTCCGGTTCCTTGGCAAGAGCCGGCCGGC
GGAGAGGTGCACGGCATCCTGCGGGGGGGTGGCGCCGCCGTCCGGCGCCG
GCGCCGGGGCGCCGGCCACCGTCTGCGACCGGTCGTGCTACTCCGGTGGC
GAGCTCGGGGCGCGGTTCGGCGGCTACCTGTGCGGGGCAGGGGATGTCGC
GGAGTACGGCCCCCACTGCCGGACGTGCTTCACCGACCTGGAGGAGGCGC
AGGCGGCGGAGGAGAGGCTGGCCGAAGAGGAGCGAGCGGCGATGCGGGGG
AGAGGCTTCAAGATGTCCGGGGACAAGGAGAAGGCCAGGAGGGTTCTTAG
GGCGGACGACGGGCCGGAGGGGAGCGCCGGATGGGTCGAGGGCGAGGAAG
GAGAGGGGGGGGGGGATAGCCGGGCGGTGTTGAGGGGTAGCGGAGGCGGG
GGCGCGAGAGTGACACGGCGGATGGATGCCGTCTACTACCGCGGTGCCGA
CGACGAGATGGTCGAGAGGAGACGGCACGTGATCATGTGCGACACGCTGA
TGCCACCGCCCCCTGCCACGGGCTGCAGCAGCAAGTGTCAGATGAAGACG
GATACGATTGCAAACGTTGGGTTTCAGGACGTGGACCAGCAGGCGGTCCT
GAAGGCGGTGGCGAGCGACACGCTCTTCATTCACGGCAGCCTGACGGGAG
GGGGCGGGTCGATGTTTCACGCAAGGGGCGCGAAGGTGGATTCCTCGCCG
GCGCTCCGGTTCCTTGGCAAGAGCCGGCCGGCGGAGAGGTGCACGGCATC
CTGCGGGGGGGTGGCGCCGCCGTCCGGCGCCGGCGCCGGGGCGCCGGCCA
CCGTCTGCGACCGGTCGTGCTACTCCGGTGGCGAGCTCGGGGCGCGGTTC
GGCGGCTACCTGTGCGGGGCAGGGGATGTCGCGGAGTACGGCCCCCACTG
CCGGACGTGCTTCACCGACCTGGAGGAGGCGCAGGCGGCGGAGGAGAGGC
TGGCCGAAGAGGAGCGAGCGGCGATGCGGGGGAGAGGCTTCAAGATGTCC
GGGGACAAGGAGAAGGCCAGGAGGGTTCTTAGGGCGGACGACGGGCCGGA
GGGGAGCGCCGGATGGGTCGAGGGCGAGGAAGGAGAGGGGGGGGGGGATA
GCCGGGCGGTGTTGAGGGGTAGCGGAGGCGGGGGCGCGAGAGTGACACGG
CGGATGGATGCCGTCTACTACCGCGGTGCCGACGACGAGATGGTCGAGAG
GAGACGGCACGTGATCATGTGCGACACGCTGATGCCACCGCCCCCTGCCA
CGGGCTGCAGCAGCAAGTGTCAGATGAAGACGGATACGGTTTGTGACCGT
AGTTGCGGGACGGGGCGGTACGGCGACTACAACTGCGGCTGGCGAGGCTA
CGGTTCGGACTGCCGGTTCTGCTTCAACGACCGCGAGGAGGCCCTGACGG
CCAACGCTGTGGCCAAGCGAAGAGGGGGTTCCGTTATCATGTTTGTGACC
GTAGTTGCGGGACGGGGCGGTACGGCGACTACAACTGCGGCTGGCGAGGC
TACGGTTCGGACTGCCGGTTCTGCTTCAACGACCGCGAGGAGGCCCTGAC
GGCCAACGCTGTGGCCAAGCGAAGAGGGGGTTCCGTTATCATGTGCCACA
CGTTCGAGCCGCCCACGGAGGAAGACGAATGGATGCCTAGCATCACGGCG
GAGGACGACGATGGCACGATCGGTGGGGGCGATGACGCTGCTGCGGATGC
CGAAGACGGAGCAGCTCCGAAAATCTTGACGTGAGTGCCACACGTTCGAG
CCGCCCACGGAGGAAGACGAATGGATGCCTAGCATCACGGCGGAGGACGA
CGATGGCACGATCGGTGGGGGCGATGACGCTGCTGCGGATGCCGAAGACG
GAGCAGCTCCGAAAATCTTGACGTGA
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