mRNA_E-fasciculatus_F_contig14683.3358.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE) HSP 1 Score: 665 bits (1717), Expect = 7.550e-226 Identity = 352/409 (86.06%), Postives = 366/409 (89.49%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARGAKVDSSPALRFLGKSRPAERCTASCGGVAPPS-GAGAGAPATVCDRSCYSGGELGARFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 1224
SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATI+DFPYSWPLWQR+SRKFVA+DLIANVGFQD+DQQAVLKAVAS+TLFIHGSLTGGGGSMFHA GAK DSSPALRFLGK+RP ERCTASCGG APPS G GAGA ATVCDRSCYSGGELGARFGGYLCGAGD+ EYG HCRTCFTD+EEAQAAEE+LAEEE+AAMRGR FKM D EK+RRVLRADDGPEG+AGWVEG EG GDSRAVLRG+ XXXXXXXXXXXXXXX ATGCS+KCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE
Sbjct: 244 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATISDFPYSWPLWQRFSRKFVAIDLIANVGFQDMDQQAVLKAVASNTLFIHGSLTGGGGSMFHASGAKADSSPALRFLGKNRPGERCTASCGGGAPPSSGVGAGALATVCDRSCYSGGELGARFGGYLCGAGDIKEYGSHCRTCFTDMEEAQAAEEQLAEEEQAAMRGRSFKMPVDNEKSRRVLRADDGPEGAAGWVEGGEG---GDSRAVLRGN-RGGGAGVTRRMDAVDGGTDDEMVEXXXXXXXXXXXXXXXPATGCSNKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 648
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 1.800e-125 Identity = 227/460 (49.35%), Postives = 278/460 (60.43%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARGAKVDSSPALRFLGKSRPAERCTASCGGVAP-------PSGAGAGAPATVCDRSCYSGGELGARFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGP----EGSAGWVEGEEGE--------GGGDSR--AVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTEEDEWMPSITAEDDDGTIGXXXDAAADAEDGA 1317
SFE+LY AAFGGVEPFW+KGS L + HE VV E+R +GHINGNAIYNNTD FV++VN+T+TRWEYT YD ALWATI+DFPYSWPLWQR+SRKFV +LIANVG DVD + +L AVA TLFIHG+ T GG SM +G + AERCT SCG P PSG ATVCDRSCY+GG GARFGG+LCGAGDVA YG HCRTCFTDL EA+AAE+ LA +ER + G +G+ + R+D+ G GW + E GE G D+R + A+GCS +C D VCDRSCGTGR+GDYNC WRGYG +CR+C+NDR +A+ AN VA++RGGSV+MC+TFEPPTE+++W + AE + +A ADA++ A
Sbjct: 214 SFEELYTAAFGGVEPFWVKGSALVSGSSHEIVVHSENRTTVGHINGNAIYNNTDQTFVDYVNFTVTRWEYTLPYDEALWATISDFPYSWPLWQRFSRKFVTTNLIANVGVHDVDIRELLDAVAGGTLFIHGTPTDGGVSM----------------VGSNELAERCTVSCGFRFPNAHATMAPSGT-----ATVCDRSCYAGGRDGARFGGHLCGAGDVATYGAHCRTCFTDLGEAEAAEDTLALQERLVLEREGDTRTGNVA-FEKSWRSDEAAWTYGRGGEGWPQQEVGEQHVEGGVGGNRDNRERGAVGHQRQQGGVNIMEPKQDRDMNKVQPILEKQRHVIMCDTLMPPPAASGCSHQCHEMDDAVCDRSCGTGRHGDYNCNWRGYGKNCRYCYNDRLQAMAANVVARQRGGSVVMCNTFEPPTEDEDWESPVEAEKVRAMVKLDEEADADAQEKA 651
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI) HSP 1 Score: 305 bits (782), Expect = 1.550e-90 Identity = 182/446 (40.81%), Postives = 229/446 (51.35%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARG---------------------AKVDSSPALRFLGKSRPAER-----CTASCG---------GVAPPSGAGAGAPATVCDRSCYSGGELGA---RFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDTVCDRSCGTGRYGDYNCGWRGYGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 1224
SFEKLY AAF VEPFW+KGS L G NFH TV + ++ H+LGHINGNAIYNN+DPAF +FV +TL RW Y+ SYDVALWAT++DFPYSWPLWQR+S KFV+ +LIANVGF DVDQ+ V A+AS+T+FIHGSLTGGGG+ F + A ++++ A +G P+ R C CG G G ATVCD + S G+ + G + CGAGD +G HCR C+ D EEA A+ L + R A +E+ V+ D LR A+ CS KC K DT+CD C +G +G+YNC WR +G CRFCF+D A+ A+ AKR GG VIMC+T EPP E
Sbjct: 73 SFEKLYVAAFDVVEPFWVKGSILAGTNFHGTVTITDNWHMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETVGNALASETMFIHGSLTGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSTRLATPECRTECGSTVSWDLLGGXXXXXXDGVMDMATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRPCYFDAEEALKADRVLQNQTREA----------SEEQPHHVIMCD-----------------------TLR----------------------------------------PPEASTCSLKCATKKDTICDDRCKSGLFGNYNCNWRDHGEHCRFCFDDTAAAIVADKAAKRTGGRVIMCNTHEPPVE 445
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.250e-79 Identity = 178/482 (36.93%), Postives = 230/482 (47.72%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGGSMFHARG---------------------AKVDSSPALRFLGKSRPAER-----CTASCGGVAPPS--GAGAGAP-----ATVCDRSCYSGGELGA---RFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDT------------------------VCDRSCGTGRYGDYNCGWRGYGS--------------DCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPPTE 1224
SFEKLY AAF VEPFW+KGS L G NFH T + ++ +LGHINGNAIYNN+DPAF +FV +TL RW Y+ SYDVALWAT++DFPYSWPLWQR+S KFV+ +LIANVGF DVDQ+ + A+AS+T+FIHGSL+GGGG+ F + A ++++ A +G P+ R C CG G G G ATVCD + S G+ + G + CGAGD +G HCR+C+ D EEA A+ L + R + + R V+ D LR A+ CS KC +K DT +CD C +G +G+YNC WR +G+ CRFCF+D A+ A+ AKR GG VIMC+T EPP E
Sbjct: 73 SFEKLYIAAFDVVEPFWVKGSVLAGTNFHGTATITDNWRMLGHINGNAIYNNSDPAFADFVEFTLARWGYSYSYDVALWATVSDFPYSWPLWQRFSSKFVSTNLIANVGFLDVDQETLGNALASETMFIHGSLSGGGGTQFASGATAEKGGNAAAASEGGNSLRIMASLEANAAGEDVGGGGPSIRLATPECRTECGSTVSWDLLGGGGGEDGVMDIATVCDHATCSAATAGSADGKPGAWSCGAGDEERFGKHCRSCYFDAEEALKADRILQNQAREV----------GEVQPRHVIMCD-----------------------TLR----------------------------------------PPEASTCSLKCALKKDTARTNSSMRPPEPHVNPVWLYVPPQICDDRCESGLFGNYNCNWRDHGALLWTQMILFTPAPEHCRFCFDDTAAAIVADETAKRMGGRVIMCNTHEPPVE 481
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FI37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 185 bits (469), Expect = 3.300e-47 Identity = 171/469 (36.46%), Postives = 212/469 (45.20%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGSLTGGGG-SMFHAR--GAKVDSSPALRFLGKSRPA-------------------------------ERCTASCGGVAPPSGAGAGAPATVCDRSCYSGGELGARFGGYLCGAGDVAEYGPHCRTCFTDLEEAQAAEERLAEEERAAMRGRGFKMSGDKEKARRVLRADDGPEGSAGWVEGEEGEGGGDSRAVLRGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCSSKCQMKTDT-----VCDRSCGTGR-YGDYNCGWRG--YGSDCRFCFNDREEALTANAVAKRRGGSVIMCHTFEPP-------TEEDEWMPSITAED 1260
SFE+LY AAF E FW+KGS LEG +FH E HVLGHINGNAIYNN DPAFVE+V YT RW Y YDVALW TI+DFPYSWPL+QRYS KFV +LI++VG++ V+ V AVA TLFIHGS G + + A A VD + + R L + P E C C + G VCD +C S +G CGA + +YG CR C+ D E+A+ + RA M KM D RR+ AD+ S + D A+ + XXXXXXXXXXX GC C+ + VCD +C + YG CG + YG+DCR C+ND E+A + R IMC T P T DE P + A D
Sbjct: 152 SFEELYHAAFRVNEEFWVKGSNLEGTSFHSNADAIEMWHVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGYEHVNHDTVSDAVAGKTLFIHGSSVDEGNVASYEATEGDAAVDVATSQRQLTEDVPKWQAQEKWRNTSXXXXXXXXXXKKQYEDSSDEEGCMDGCEYTSKD-----GTRGRVCDSNCSSPNV----YGTLGCGAKN-GKYGADCRACYNDDEKARKQD---TPGNRAIMCS--TKMPVDVY-GRRLTPADE----SNPLLVAR------DLEALQKDEVHRQLSEDVPKWRAQEKWKNNTXXXXXXXXXXXKQYEDSSDEEGCMDGCEYTSKDGTRGRVCDSNCSSSNVYGTLGCGAKNGKYGADCRACYNDDEKARKQDTPGNR----AIMCSTKMPVDVYGRRLTTADEVNPLLVARD 590
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FI39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 178 bits (452), Expect = 5.390e-45 Identity = 86/132 (65.15%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGS 396
SFE+LY AAF E FW+KGS LEG +FH T E VLGHINGNAIYNN DPAFVE+V YT +RW Y YDVALW TI+DFPYSWPL+QRYS KFV +LI++VGF+ V V AVA TLFIHGS
Sbjct: 154 SFEELYHAAFRVNEEFWVKGSNLEGTSFHSTAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRSRWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISSVGFEHVGHDMVSDAVAGQTLFIHGS 285
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: A0A6H5JSN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN3_9PHAE) HSP 1 Score: 177 bits (449), Expect = 1.230e-44 Identity = 84/131 (64.12%), Postives = 98/131 (74.81%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHG 393
SFE+LY AAF E FW+KGS LEG NFH + ++ + HVLGHINGNAIYNN D AFVE+V+YT +RWEY YDVALW TI+DFPYSWPL+QR+S KFV +LIA VG VD V A+A TLFIHG
Sbjct: 163 SFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNKDQAFVEYVDYTRSRWEYNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHG 293
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FR80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR80_ECTSI) HSP 1 Score: 176 bits (445), Expect = 3.620e-44 Identity = 82/132 (62.12%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGS 396
SFE+LY AAF E FW+KGS LEG NFH + + + V+GHINGNAIYNN DPAF E+V+YT R++Y YDVALW TI+DFPYSWPL+QRYSRKFV +LI+ VG++ VD V A+A TLFIHGS
Sbjct: 95 SFEELYHAAFRVNEEFWVKGSNLEGTNFHSSADVTDMWRVMGHINGNAIYNNNDPAFAEYVDYTRARFKYRYPYDVALWLTISDFPYSWPLYQRYSRKFVTTNLISYVGYEHVDHDTVSDAIAGQTLFIHGS 226
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D8LLE5_ECTSI (Imm upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI) HSP 1 Score: 173 bits (439), Expect = 5.180e-44 Identity = 83/131 (63.36%), Postives = 96/131 (73.28%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHG 393
SFE+LY AAF E FW+KGS LEG NFH + ++ + HVLGHINGNAIYNN D AFVE+V+YT RWE YDVALW TI+DFPYSWPL+QR+S KFV +LIA VG VD V A+A TLFIHG
Sbjct: 35 SFEELYHAAFRVNEEFWVKGSNLEGTNFHSSSMMSDMWHVLGHINGNAIYNNNDQAFVEYVDYTRARWEDNYPYDVALWLTISDFPYSWPLYQRFSNKFVTTNLIAYVGKAHVDHGTVTDAIAGQTLFIHG 165
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Match: D7FI63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 174 bits (442), Expect = 1.090e-43 Identity = 84/132 (63.64%), Postives = 95/132 (71.97%), Query Frame = 1
Query: 1 SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYNNTDPAFVEFVNYTLTRWEYTQSYDVALWATIADFPYSWPLWQRYSRKFVAVDLIANVGFQDVDQQAVLKAVASDTLFIHGS 396
SFE+LY AAF E FW+KGS LEG +FH + E VLGHINGNAIYNN DPAFVE+V YT RW Y YDVALW TI+DFPYSWPL+QRYS KFV +LI+ VG++ V V AVA TLFIHGS
Sbjct: 151 SFEELYHAAFRVNEEFWVKGSNLEGTSFHSSAEASEMWQVLGHINGNAIYNNDDPAFVEYVEYTRARWGYEHPYDVALWMTISDFPYSWPLYQRYSSKFVVTNLISYVGYEHVSHDTVSDAVAGKTLFIHGS 282 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14683.3358.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14683.3358.1 >prot_E-fasciculatus_F_contig14683.3358.1 ID=prot_E-fasciculatus_F_contig14683.3358.1|Name=mRNA_E-fasciculatus_F_contig14683.3358.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=446bp SFEKLYAAAFGGVEPFWIKGSTLEGVNFHETVVLPESRHVLGHINGNAIYback to top mRNA from alignment at E-fasciculatus_F_contig14683:671..3138- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14683.3358.1 ID=mRNA_E-fasciculatus_F_contig14683.3358.1|Name=mRNA_E-fasciculatus_F_contig14683.3358.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2468bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14683:671..3138- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14683:671..3138- >mRNA_E-fasciculatus_F_contig14683.3358.1 ID=mRNA_E-fasciculatus_F_contig14683.3358.1|Name=mRNA_E-fasciculatus_F_contig14683.3358.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2676bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14683:671..3138- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |