mRNA_E-fasciculatus_F_contig14679.3356.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14679.3356.1
Unique NamemRNA_E-fasciculatus_F_contig14679.3356.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A6H5KC36_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC36_9PHAE)

HSP 1 Score: 743 bits (1919), Expect = 3.400e-256
Identity = 435/513 (84.80%), Postives = 446/513 (86.94%), Query Frame = 1
Query:    1 VTLYIQMTLCPSETLQDWLQNRNSRLSSECPGSGVLFEDDARAPSRTPPSPPPRPAFGRGSTGSVPAVLIPNDLDKGDGGRKADLGTPATSPRTDPVTSASSGQSDRMSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCEGXXXXXXXXAFSTAAPAKAGXXXXXRKTPIAGGSPARSVSSETGSCDGRGARGVGARVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNP-DPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEERPSAEEMLEMLDDMDGHCGCEGCPGGITGGADRRGXXXXXXXXXXXXXXXXX-DSGLREELAAKTRKVQEQQEVLIGQLQRKLTQLSRNPSPAVGPVDASAASGRRDPTRADLLDMDALGL 1533
            VTLYIQMTLCPSETLQDWLQNRNSRLSSEC GSGVLFEDDARA SRTPPSPPPRPAFG G+TGSVPAVLI NDLDKGDGGRKADL TPATSPRTDPVTSASSG+SDR SESXXXXXXXXXXXXXXXXXXXXXXX          CEG        AFSTAAPAK  XXXXXRKTPIAGGSPARSVSS++GSCDGRGARGVGARVDLHEAL+LFRQLAEGVSHVHSKGIIHRDLKPEN+FVGEDGCLKIGDFGLSRTEVT GLSSDD+S+             A    +PLEAAIVPRRRN PQSECHTTGVGTASYASPEQLQGRRYG+RSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHL KRSPAVARLAELLCRTVPEERPSAEEMLEMLDDMDG CGCEGCPGGITGGADRRG                  DSGLREELAAKTRKV+EQ EVLIGQLQRKLTQLSRNPSPAVGPVDA AASGRRDPTRADLLDMDALGL
Sbjct:  670 VTLYIQMTLCPSETLQDWLQNRNSRLSSECAGSGVLFEDDARASSRTPPSPPPRPAFGGGNTGSVPAVLISNDLDKGDGGRKADLRTPATSPRTDPVTSASSGESDRTSESXXXXXXXXXXXXXXXXXXXXXXXRETSRK----CEGQGSSKQE-AFSTAAPAKGXXXXXXRKTPIAGGSPARSVSSDSGSCDGRGARGVGARVDLHEALHLFRQLAEGVSHVHSKGIIHRDLKPENIFVGEDGCLKIGDFGLSRTEVTAGLSSDDDSNSSRNSAADPATATATAAVNPLEAAIVPRRRNPPQSECHTTGVGTASYASPEQLQGRRYGLRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLVKRSPAVARLAELLCRTVPEERPSAEEMLEMLDDMDGRCGCEGCPGGITGGADRRGGRSGSGDVSGGGGSGRPNDSGLREELAAKTRKVEEQ-EVLIGQLQRKLTQLSRNPSPAVGPVDALAASGRRDPTRADLLDMDALGL 1176          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A7S2UI84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI84_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.910e-32
Identity = 80/198 (40.40%), Postives = 109/198 (55.05%), Query Frame = 1
Query:  625 ALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAV-------NPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEERPSAEEML 1197
            A  +FRQ   G+ HVH KGI+HRDLKP N+F  EDG  KIGDFGLS+   +    ++ +S+             ++       + DP        + N    E  T GVGT+SYASPEQ+    YG  +D+FSLGL+LLEL C F T HER  AFQ +R+     P  + +  P VA L     +T P++RP+A ++L
Sbjct:   56 AFEIFRQTVRGLQHVHGKGIVHRDLKPSNIFAAEDGVFKIGDFGLSKLLRSANGGAEFDSAQQPGFRPRHLVRQSLMITAGSNSDDPTGVDQDEGKVNHGWQEPLTAGVGTSSYASPEQMVSDAYGPEADIFSLGLILLELFCIFGTEHERILAFQGVRKKR-ELPSWMKRTYPEVAALVLECTQTDPDKRPTASDIL 252          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A1W0A2Y0_9STRA (Heme regulated eukaryotic translation initiation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2Y0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.300e-30
Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 1
Query:  610 VDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARL 1140
            VD  E+L +FRQL +G+ HVH  GIIHRDLKP NVF+  +G +KIGDFGLS+  +   + +DD                     P+  + +P   NS  +  HT GVGT SYASPEQ+ G  Y  + D FSLG++LLEL C F+T  ERA AF+ +R+     P +L    P +A L
Sbjct:  468 VDFRESLRIFRQLVDGIQHVHDNGIIHRDLKPSNVFMTREGSIKIGDFGLSK--LLAEVMADD---------------------PMNFSYMP---NSSNANGHTQGVGTMSYASPEQVAGTHYDCKVDSFSLGIILLELFCIFSTKMERARAFKNVREDAKKVPENLLLSYPEIAEL 618          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A7S2UG86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG86_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.660e-30
Identity = 80/198 (40.40%), Postives = 109/198 (55.05%), Query Frame = 1
Query:  625 ALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAV-------NPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEERPSAEEML 1197
            A  +FRQ   G+ HVH KGI+HRDLKP N+F  EDG  KIGDFGLS+   +    ++ +S+             ++       + DP        + N    E  T GVGT+SYASPEQ+    YG  +D+FSLGL+LLEL C F T HER  AFQ +R+     P  + +  P VA L     +T P++RP+A ++L
Sbjct:  602 AFEIFRQTVRGLQHVHGKGIVHRDLKPSNIFAAEDGVFKIGDFGLSKLLRSANGGAEFDSAQQPGFRPRHLVRQSLMITAGSNSDDPTGVDQDEGKVNHGWQEPLTAGVGTSSYASPEQMVSDAYGPEADIFSLGLILLELFCIFGTEHERILAFQGVRKKR-ELPSWMKRTYPEVAALVLECTQTDPDKRPTASDIL 798          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A1V9Z444_9STRA (Heme regulated eukaryotic translation initiation factor-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z444_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.800e-29
Identity = 81/183 (44.26%), Postives = 101/183 (55.19%), Query Frame = 1
Query:  592 RGVGARVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARL 1140
            R VG RVD H +L LFRQL  G+ HVH  GIIHRDLKP NVF+  +G LKIGDFGLS+  +   + +DD                     P+    +P       +  HT GVGT SYASPEQ+ G  Y  + D FSLG++LLEL C F T  ERA A + +R+   + P  LA   P +A L
Sbjct:  493 RNVG-RVDFHASLRLFRQLVNGIKHVHENGIIHRDLKPSNVFMTREGSLKIGDFGLSK--LLAEVMADD---------------------PINRGFMPPGN---ATNGHTQGVGTMSYASPEQVAGTNYDHKVDSFSLGIILLELFCVFGTKMERAQALKDVREDPLAVPEELATTYPEIATL 648          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A7S2RPJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RPJ7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.930e-29
Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 1
Query:  610 VDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPH----LAKRSPAVARLAELLCRTVPEERPSAEEMLEMLDDM 1215
            VD+  AL +F Q+A+GV HVH +G+IHRDLKP N F+ + G +KIGDFGLSR   T GL    + +                 D +     P+     + + +T GVGT SYASPEQ+ G  Y   +D++SLG++L ELC   +T  ER   F+ +R+   S P H    +AK  P++ +L   +    P ERPS+  +   ++ +
Sbjct:  216 VDIPYALRMFSQIAQGVKHVHQQGLIHRDLKPSNCFIDDTGTVKIGDFGLSRESATAGLEETGDIT-----------------DDIMDGDDPKDNCLGRGQDNTAGVGTRSYASPEQMNGSDYDASTDVYSLGIILFELCYLMSTGMERHLVFKGIRR--RSFPEHWHKTVAKAFPSLHKLLMAMLSPNPSERPSSAAVANHIEAL 402          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A485L7I8_9STRA (Aste57867_17300 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7I8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.020e-28
Identity = 87/231 (37.66%), Postives = 118/231 (51.08%), Query Frame = 1
Query:  577 DGRGARGVGARVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLA-----------------ELLCRTVPE-ERPSAEEMLEMLDDM 1215
            D R   G GA +D  + L LFRQL EG+ HVH  GIIHRDLKP NVF+  DGCLKIGDFGLS+                            +  + ++   V    ++  S+ HT GVGT SYASPEQ+  ++Y V++D +SLG++LLEL   F T  ERA A + +R      P  + ++ P +A L                  E L RT P+ +   AEE+LE+   +
Sbjct:  472 DDRNRNGDGA-IDFEKNLALFRQLVEGLHHVHQNGIIHRDLKPSNVFMTHDGCLKIGDFGLSK----------------------------LLAEVMKQDSVFGHESTSHSDDHTQGVGTMSYASPEQVSSQQYDVKADSYSLGIILLELFAPFQTRMERAMALKDIRMDPCILPCGVTEKYPEIAHLIKYLVAPTSLRWTMEQTREYLLRTFPQVQLEKAEEVLELRQKL 673          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A1Z5K296_FISSO (Eukaryotic translation initiation factor 2-alpha kinase 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K296_FISSO)

HSP 1 Score: 129 bits (323), Expect = 5.620e-28
Identity = 85/197 (43.15%), Postives = 107/197 (54.31%), Query Frame = 1
Query:  616 LHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVG-EDGCL-KIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLC-RTVPEERPSAEEML 1197
            +  A  +F Q+  G+ HVH KGI+HRDLKP N+F   EDG + KIGDFGLS+   T        +                  D L +  V    N P    HT GVGTASYA+PEQ+  R YG ++D+FSLGL+LLEL C F+T HER   F+  RQ G   P  L+K    VA    L C  + P+ RPSA E+L
Sbjct:  410 IEVAAQVFDQIVAGLCHVHGKGIVHRDLKPANIFTSVEDGLIFKIGDFGLSKLIQTASRQGTLSTRRSFLMLDHESELRQETDDTLASKFV-LDWNDP----HTAGVGTASYAAPEQVSSREYGTKADVFSLGLILLELLCSFSTEHERLLTFRDCRQ-GRKLPTELSKYK--VASEIILSCTNSNPDLRPSAAELL 598          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A024TET7_9STRA (PEK protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TET7_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.650e-28
Identity = 73/159 (45.91%), Postives = 90/159 (56.60%), Query Frame = 1
Query:  607 RVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQ 1083
            +VD  ++L LFRQL +G+ HVH  GI+HRDLKP NVF+  DG LKIGDFGLS+  +   +  DD+                          V RR  +P    HT GVGT SYASPEQ+ G  Y  + D FSLG++LLEL   F T  ERADA   +RQ
Sbjct:  483 KVDGDQSLRLFRQLVDGLLHVHENGIVHRDLKPSNVFLARDGSLKIGDFGLSKL-LADAMCDDDD--------------------------VRRRSQTPCDPRHTQGVGTMSYASPEQVAGTDYDAKVDSFSLGIILLELFVPFHTRMERADALTRLRQ 614          
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: W4FQF5_9STRA (PEK protein kinase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQF5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.080e-27
Identity = 78/190 (41.05%), Postives = 104/190 (54.74%), Query Frame = 1
Query:  610 VDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSEC-HTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEER 1176
            V++HE + LFRQL +G+ HVH+ GI+HRDLKP NVF+  DG LKIGDFGLS+      L +DD                   P P +         +   +  HT G+GT +YASPEQ+ GR Y V+ D FSLG++LLEL   F T  ERADA   +R+     P H+    P VA + + L   +  +R
Sbjct:  528 VNVHENVTLFRQLVDGLLHVHANGIVHRDLKPSNVFLARDGSLKIGDFGLSKLL----LLADDGIMRRPHD----------EPHPTDKRPTFAEEGADDDDPRHTRGIGTMAYASPEQVAGRDYDVKVDSFSLGIILLELFAPFQTRMERADALTRVRRHPCELPAHVTAVYPEVAVMIKGLVAPIAADR 703          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC36_9PHAE3.400e-25684.80Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S2UI84_9STRA3.910e-3240.40Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A1W0A2Y0_9STRA1.300e-3043.50Heme regulated eukaryotic translation initiation f... [more]
A0A7S2UG86_9STRA4.660e-3040.40Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A1V9Z444_9STRA2.800e-2944.26Heme regulated eukaryotic translation initiation f... [more]
A0A7S2RPJ7_9STRA6.930e-2936.89Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A485L7I8_9STRA2.020e-2837.66Aste57867_17300 protein n=1 Tax=Aphanomyces stella... [more]
A0A1Z5K296_FISSO5.620e-2843.15Eukaryotic translation initiation factor 2-alpha k... [more]
A0A024TET7_9STRA6.650e-2845.91PEK protein kinase n=1 Tax=Aphanomyces invadans Ta... [more]
W4FQF5_9STRA1.080e-2741.05PEK protein kinase n=3 Tax=Aphanomyces astaci TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14679contigE-fasciculatus_F_contig14679:103..2572 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score780.8
Seed ortholog evalue4e-223
Seed eggNOG ortholog2880.D8LBS3
KEGG koko:K08860,ko:K16194,ko:K16196
KEGG Pathwayko04137,ko04138,ko04140,ko04141,ko04210,ko04214,ko04932,ko05010,ko05160,ko05162,ko05164,ko05168,ko05169,map04137,map04138,map04140,map04141,map04210,map04214,map04932,map05010,map05160,map05162,map05164,map05168,map05169
EggNOG free text desc.eukaryotic translation initiation factor 2alpha kinase activity
EggNOG OGsCOG0124@1,KOG1035@2759
EC2.7.11.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryother localisation
Exons3
Model size1593
Cds size1575
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14679.3356.1prot_E-fasciculatus_F_contig14679.3356.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14679 121..2572 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927952.0860207-UTR-E-fasciculatus_F_contig14679:102..1201622927952.0860207-UTR-E-fasciculatus_F_contig14679:102..120Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14679 103..120 +
1695995764.1966977-UTR-E-fasciculatus_F_contig14679:102..1201695995764.1966977-UTR-E-fasciculatus_F_contig14679:102..120Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14679 103..120 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927952.0987198-CDS-E-fasciculatus_F_contig14679:120..8041622927952.0987198-CDS-E-fasciculatus_F_contig14679:120..804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14679 121..804 +
1695995764.2084322-CDS-E-fasciculatus_F_contig14679:120..8041695995764.2084322-CDS-E-fasciculatus_F_contig14679:120..804Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14679 121..804 +
1622927952.1150131-CDS-E-fasciculatus_F_contig14679:1265..19461622927952.1150131-CDS-E-fasciculatus_F_contig14679:1265..1946Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14679 1266..1946 +
1695995764.2164714-CDS-E-fasciculatus_F_contig14679:1265..19461695995764.2164714-CDS-E-fasciculatus_F_contig14679:1265..1946Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14679 1266..1946 +
1622927952.1354752-CDS-E-fasciculatus_F_contig14679:2362..25721622927952.1354752-CDS-E-fasciculatus_F_contig14679:2362..2572Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14679 2363..2572 +
1695995764.2272148-CDS-E-fasciculatus_F_contig14679:2362..25721695995764.2272148-CDS-E-fasciculatus_F_contig14679:2362..2572Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14679 2363..2572 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14679.3356.1

>prot_E-fasciculatus_F_contig14679.3356.1 ID=prot_E-fasciculatus_F_contig14679.3356.1|Name=mRNA_E-fasciculatus_F_contig14679.3356.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=525bp
MTLCPSETLQDWLQNRNSRLSSECPGSGVLFEDDARAPSRTPPSPPPRPA
FGRGSTGSVPAVLIPNDLDKGDGGRKADLGTPATSPRTDPVTSASSGQSD
RMSESSSSSGASSSSSGGGGGGGAGVLCPPPTRETSRKCEGGQGSSKQEA
FSTAAPAKAGEQQRRRKTPIAGGSPARSVSSETGSCDGRGARGVGARVDL
HEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRT
EVTTGLSSDDESSTSTSATATATATAAVNPDPLEAAIVPRRRNSPQSECH
TTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAF
QAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEERPSAEEMLEMLDDMD
GHCGCEGCPGGITGGADRRGGRSGSGDVSGGGSGHPDDSGLREELAAKTR
KVQEQQEVLIGQLQRKLTQLSRNPSPAVGPVDASAASGRRDPTRADLLDM
DALGLGLAALGTADNGGDAQSSER*
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mRNA from alignment at E-fasciculatus_F_contig14679:103..2572+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14679.3356.1 ID=mRNA_E-fasciculatus_F_contig14679.3356.1|Name=mRNA_E-fasciculatus_F_contig14679.3356.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2470bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14679:103..2572+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCACGCTGTACATCCAGATGACGCTCTGCCCGAGCGAGACCCTCCAGGA CTGGCTGCAGAACCGTAACTCGCGGCTGTCTTCGGAGTGCCCGGGGAGCG GCGTCCTGTTTGAGGACGACGCCCGCGCTCCTTCGCGAACGCCTCCGTCT CCACCCCCCCGGCCCGCCTTCGGCCGCGGCAGCACGGGCTCGGTCCCGGC GGTCCTGATCCCGAACGACCTCGACAAGGGCGACGGCGGCCGAAAGGCCG ACCTTGGGACTCCCGCGACGTCTCCGAGGACGGACCCGGTCACCTCCGCT TCGTCCGGACAGTCAGACCGGATGTCGGAAAGCTCGTCGTCCTCCGGCGC CAGCAGCAGCAGTAGCGGCGGCGGCGGCGGCGGCGGCGCGGGCGTGCTGT GCCCCCCTCCCACTCGCGAGACGAGCCGGAAGTGCGAGGGCGGCCAAGGG AGCTCCAAGCAGGAGGCGTTCAGCACGGCGGCCCCCGCGAAGGCCGGCGA GCAACAGCGGCGGCGGAAGACGCCGATCGCCGGCGGGTCCCCGGCTCGCT CGGTCTCCTCGGAGACGGGGTCGTGCGACGGCAGGGGCGCCCGCGGGGTA GGGGCTCGCGTGGACCTGCACGAGGCGCTGTATCTCTTCCGGCAGCTCGC CGAAGGGGTGTCGCACGTGCATTCCAAGGGGATCATACATCGGGACCTGA AGGTGTGTGTGTGTGTGTGTGTGTGTGTGATAAGAGCTTACTCCCCCCCC CCGCCCCTGTCATCCATGTTTTTGCGTGCGGTGAGCGACGAACATGCATG CGGTTGGTGTGTGCGTTTCGCTAACGGGCTGACACGATGAAATGGTGTGT GTGTGTGTGTGTGGTCGGAGTTTGATGTTTCCTGTTCTGGTCTTGGTCTG CTGTTGTTGTGTTATCGCTTGTAGCTGGCACGCTCTCCGTGCGACACCGA CTGATACGTCTTTTTTTTTTCTGTTCTCCTGACGCATAGTCCTCACAAGT TTGTCAAGCAGAGTCTGTGGCTAGACTCACGTCTCGCCGGCAAACATGTC CCCCCCCGTTCAATTGCCCGCGTCGTTCGTCCGCTTCTCACCTCTGACGC CGGCAAACTCCCCTCCCCTCGTTACCTACACAACAATGCCAACGTCATCC TCCTCATCAAAAGCCGGAGAACGTCTTCGTTGGCGAAGACGGCTGCCTCA AGATCGGAGACTTCGGGCTCTCCCGGACAGAGGTCACGACAGGTCTATCC AGCGATGACGAGAGCAGCACCAGCACCAGTGCCACCGCCACCGCCACCGC TACAGCGGCGGTCAACCCGGACCCGTTGGAAGCGGCCATCGTGCCTCGGA GGCGGAACTCGCCGCAGAGCGAGTGCCACACCACCGGGGTGGGGACGGCG TCCTACGCCTCCCCCGAGCAGCTGCAGGGCCGGCGGTACGGCGTGCGGTC CGACCTCTTCTCCCTCGGGCTCGTCCTGCTGGAGCTCTGCTGCTGCTTCA CGACGACGCACGAGCGCGCCGACGCCTTCCAGGCCATGCGGCAGCCAGGC GGGTCCGCCCCGCCGCACCTCGCGAAGCGGAGCCCCGCCGTCGCCCGGCT CGCGGAGCTCCTGTGCCGCACCGTCCCGGAGGAGCGCCCGTCCGCGGAGG AGATGCTGGAGATGCTCGACGACATGGACGGGCACTGCGGGTGCGAGGGC TGCCCGGGGGGGATCACGGGCGGGGCCGACAGGAGGGGGGGTAGGAGCGG CAGCGGGGACGTAAGCGGCGGCGGCAGCGGGCACCCGGACGACTCGGGCC TTCGGGAAGAGCTGGCGGCGAAGACGCGAAAAGTCCAGGAGCAGGTTCGT CCGTCCGCCGTTTGTTCGTTGGTTCCTTCCTTTTTTGTGTCCCTCCCTCC CTCGTGCGCGCGCCTTGCTTGCATGCAGAGGAGGGTTCGGTGTCCATGTT TTTTGTGGCGTAGTTGCTATGTAGCGACAGTTTTTGGTCGTCGACTCTTG TCTTGGTTGTCTTCATATTGGATGTGGTAAAACATGTGTATGCTCCTTTG TCCCCCAGCAGGAAGACGGGGGCCTCTTTTTCTCTGTCTTCTCTCCGCAT TGCTGCTCAGCCCCCCGACAACCATATACGAGTACTAGCTTTCTTGAGAG CGGTTCTCGAAGCCTTGGTCCGCCCGAAACTGCCCCACTGTTTTTTTGTC GCCGTCCCCTCTAACCTTGTACGTTCTCTTTGCTTCTTCACCCCCCCCCC CCCCCTCGAGCAGGAAGTCTTGATCGGACAGCTCCAGCGGAAACTGACGC AGCTCTCGCGGAACCCTTCCCCCGCCGTCGGACCGGTGGACGCCTCCGCG GCAAGCGGACGCAGGGACCCCACCCGGGCAGATCTCCTCGACATGGACGC GCTGGGGCTGGGGCTCGCCGCCCTCGGGACAGCCGACAACGGCGGCGATG CGCAGAGCTCCGAGCGATAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14679:103..2572+

>mRNA_E-fasciculatus_F_contig14679.3356.1 ID=mRNA_E-fasciculatus_F_contig14679.3356.1|Name=mRNA_E-fasciculatus_F_contig14679.3356.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3150bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14679:103..2572+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGACGCTCTGCCCGAGCGAGACCCTCCAGGACTGGCTGCAGAACCGTAA
CTCGCGGCTGTCTTCGGAGTGCCCGGGGAGCGGCGTCCTGTTTGAGGACG
ACGCCCGCGCTCCTTCGCGAACGCCTCCGTCTCCACCCCCCCGGCCCGCC
TTCGGCCGCGGCAGCACGGGCTCGGTCCCGGCGGTCCTGATCCCGAACGA
CCTCGACAAGGGCGACGGCGGCCGAAAGGCCGACCTTGGGACTCCCGCGA
CGTCTCCGAGGACGGACCCGGTCACCTCCGCTTCGTCCGGACAGTCAGAC
CGGATGTCGGAAAGCTCGTCGTCCTCCGGCGCCAGCAGCAGCAGTAGCGG
CGGCGGCGGCGGCGGCGGCGCGGGCGTGCTGTGCCCCCCTCCCACTCGCG
AGACGAGCCGGAAGTGCGAGGGCGGCCAAGGGAGCTCCAAGCAGGAGGCG
TTCAGCACGGCGGCCCCCGCGAAGGCCGGCGAGCAACAGCGGCGGCGGAA
GACGCCGATCGCCGGCGGGTCCCCGGCTCGCTCGGTCTCCTCGGAGACGG
GGTCGTGCGACGGCAGGGGCGCCCGCGGGGTAGGGGCTCGCGTGGACCTG
CACGAGGCGCTGTATCTCTTCCGGCAGCTCGCCGAAGGGGTGTCGCACGT
GCATTCCAAGGGGATCATACATCGGGACCTGAAGATGACGCTCTGCCCGA
GCGAGACCCTCCAGGACTGGCTGCAGAACCGTAACTCGCGGCTGTCTTCG
GAGTGCCCGGGGAGCGGCGTCCTGTTTGAGGACGACGCCCGCGCTCCTTC
GCGAACGCCTCCGTCTCCACCCCCCCGGCCCGCCTTCGGCCGCGGCAGCA
CGGGCTCGGTCCCGGCGGTCCTGATCCCGAACGACCTCGACAAGGGCGAC
GGCGGCCGAAAGGCCGACCTTGGGACTCCCGCGACGTCTCCGAGGACGGA
CCCGGTCACCTCCGCTTCGTCCGGACAGTCAGACCGGATGTCGGAAAGCT
CGTCGTCCTCCGGCGCCAGCAGCAGCAGTAGCGGCGGCGGCGGCGGCGGC
GGCGCGGGCGTGCTGTGCCCCCCTCCCACTCGCGAGACGAGCCGGAAGTG
CGAGGGCGGCCAAGGGAGCTCCAAGCAGGAGGCGTTCAGCACGGCGGCCC
CCGCGAAGGCCGGCGAGCAACAGCGGCGGCGGAAGACGCCGATCGCCGGC
GGGTCCCCGGCTCGCTCGGTCTCCTCGGAGACGGGGTCGTGCGACGGCAG
GGGCGCCCGCGGGGTAGGGGCTCGCGTGGACCTGCACGAGGCGCTGTATC
TCTTCCGGCAGCTCGCCGAAGGGGTGTCGCACGTGCATTCCAAGGGGATC
ATACATCGGGACCTGAAGCCGGAGAACGTCTTCGTTGGCGAAGACGGCTG
CCTCAAGATCGGAGACTTCGGGCTCTCCCGGACAGAGGTCACGACAGGTC
TATCCAGCGATGACGAGAGCAGCACCAGCACCAGTGCCACCGCCACCGCC
ACCGCTACAGCGGCGGTCAACCCGGACCCGTTGGAAGCGGCCATCGTGCC
TCGGAGGCGGAACTCGCCGCAGAGCGAGTGCCACACCACCGGGGTGGGGA
CGGCGTCCTACGCCTCCCCCGAGCAGCTGCAGGGCCGGCGGTACGGCGTG
CGGTCCGACCTCTTCTCCCTCGGGCTCGTCCTGCTGGAGCTCTGCTGCTG
CTTCACGACGACGCACGAGCGCGCCGACGCCTTCCAGGCCATGCGGCAGC
CAGGCGGGTCCGCCCCGCCGCACCTCGCGAAGCGGAGCCCCGCCGTCGCC
CGGCTCGCGGAGCTCCTGTGCCGCACCGTCCCGGAGGAGCGCCCGTCCGC
GGAGGAGATGCTGGAGATGCTCGACGACATGGACGGGCACTGCGGGTGCG
AGGGCTGCCCGGGGGGGATCACGGGCGGGGCCGACAGGAGGGGGGGTAGG
AGCGGCAGCGGGGACGTAAGCGGCGGCGGCAGCGGGCACCCGGACGACTC
GGGCCTTCGGGAAGAGCTGGCGGCGAAGACGCGAAAAGTCCAGGAGCAGC
CGGAGAACGTCTTCGTTGGCGAAGACGGCTGCCTCAAGATCGGAGACTTC
GGGCTCTCCCGGACAGAGGTCACGACAGGTCTATCCAGCGATGACGAGAG
CAGCACCAGCACCAGTGCCACCGCCACCGCCACCGCTACAGCGGCGGTCA
ACCCGGACCCGTTGGAAGCGGCCATCGTGCCTCGGAGGCGGAACTCGCCG
CAGAGCGAGTGCCACACCACCGGGGTGGGGACGGCGTCCTACGCCTCCCC
CGAGCAGCTGCAGGGCCGGCGGTACGGCGTGCGGTCCGACCTCTTCTCCC
TCGGGCTCGTCCTGCTGGAGCTCTGCTGCTGCTTCACGACGACGCACGAG
CGCGCCGACGCCTTCCAGGCCATGCGGCAGCCAGGCGGGTCCGCCCCGCC
GCACCTCGCGAAGCGGAGCCCCGCCGTCGCCCGGCTCGCGGAGCTCCTGT
GCCGCACCGTCCCGGAGGAGCGCCCGTCCGCGGAGGAGATGCTGGAGATG
CTCGACGACATGGACGGGCACTGCGGGTGCGAGGGCTGCCCGGGGGGGAT
CACGGGCGGGGCCGACAGGAGGGGGGGTAGGAGCGGCAGCGGGGACGTAA
GCGGCGGCGGCAGCGGGCACCCGGACGACTCGGGCCTTCGGGAAGAGCTG
GCGGCGAAGACGCGAAAAGTCCAGGAGCAGCAGGAAGTCTTGATCGGACA
GCTCCAGCGGAAACTGACGCAGCTCTCGCGGAACCCTTCCCCCGCCGTCG
GACCGGTGGACGCCTCCGCGGCAAGCGGACGCAGGGACCCCACCCGGGCA
GATCTCCTCGACATGGACGCGCTGGGGCTGGGGCTCGCCGCCCTCGGGAC
AGCCGACAACGGCGGCGATGCGCAGAGCTCCGAGCGATAGCAGGAAGTCT
TGATCGGACAGCTCCAGCGGAAACTGACGCAGCTCTCGCGGAACCCTTCC
CCCGCCGTCGGACCGGTGGACGCCTCCGCGGCAAGCGGACGCAGGGACCC
CACCCGGGCAGATCTCCTCGACATGGACGCGCTGGGGCTGGGGCTCGCCG
CCCTCGGGACAGCCGACAACGGCGGCGATGCGCAGAGCTCCGAGCGATAG
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