mRNA_E-fasciculatus_F_contig14679.3356.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A6H5KC36_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC36_9PHAE) HSP 1 Score: 743 bits (1919), Expect = 3.400e-256 Identity = 435/513 (84.80%), Postives = 446/513 (86.94%), Query Frame = 1
Query: 1 VTLYIQMTLCPSETLQDWLQNRNSRLSSECPGSGVLFEDDARAPSRTPPSPPPRPAFGRGSTGSVPAVLIPNDLDKGDGGRKADLGTPATSPRTDPVTSASSGQSDRMSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCEGXXXXXXXXAFSTAAPAKAGXXXXXRKTPIAGGSPARSVSSETGSCDGRGARGVGARVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNP-DPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEERPSAEEMLEMLDDMDGHCGCEGCPGGITGGADRRGXXXXXXXXXXXXXXXXX-DSGLREELAAKTRKVQEQQEVLIGQLQRKLTQLSRNPSPAVGPVDASAASGRRDPTRADLLDMDALGL 1533
VTLYIQMTLCPSETLQDWLQNRNSRLSSEC GSGVLFEDDARA SRTPPSPPPRPAFG G+TGSVPAVLI NDLDKGDGGRKADL TPATSPRTDPVTSASSG+SDR SESXXXXXXXXXXXXXXXXXXXXXXX CEG AFSTAAPAK XXXXXRKTPIAGGSPARSVSS++GSCDGRGARGVGARVDLHEAL+LFRQLAEGVSHVHSKGIIHRDLKPEN+FVGEDGCLKIGDFGLSRTEVT GLSSDD+S+ A +PLEAAIVPRRRN PQSECHTTGVGTASYASPEQLQGRRYG+RSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHL KRSPAVARLAELLCRTVPEERPSAEEMLEMLDDMDG CGCEGCPGGITGGADRRG DSGLREELAAKTRKV+EQ EVLIGQLQRKLTQLSRNPSPAVGPVDA AASGRRDPTRADLLDMDALGL
Sbjct: 670 VTLYIQMTLCPSETLQDWLQNRNSRLSSECAGSGVLFEDDARASSRTPPSPPPRPAFGGGNTGSVPAVLISNDLDKGDGGRKADLRTPATSPRTDPVTSASSGESDRTSESXXXXXXXXXXXXXXXXXXXXXXXRETSRK----CEGQGSSKQE-AFSTAAPAKGXXXXXXRKTPIAGGSPARSVSSDSGSCDGRGARGVGARVDLHEALHLFRQLAEGVSHVHSKGIIHRDLKPENIFVGEDGCLKIGDFGLSRTEVTAGLSSDDDSNSSRNSAADPATATATAAVNPLEAAIVPRRRNPPQSECHTTGVGTASYASPEQLQGRRYGLRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLVKRSPAVARLAELLCRTVPEERPSAEEMLEMLDDMDGRCGCEGCPGGITGGADRRGGRSGSGDVSGGGGSGRPNDSGLREELAAKTRKVEEQ-EVLIGQLQRKLTQLSRNPSPAVGPVDALAASGRRDPTRADLLDMDALGL 1176
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A7S2UI84_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UI84_9STRA) HSP 1 Score: 135 bits (341), Expect = 3.910e-32 Identity = 80/198 (40.40%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 625 ALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAV-------NPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEERPSAEEML 1197
A +FRQ G+ HVH KGI+HRDLKP N+F EDG KIGDFGLS+ + ++ +S+ ++ + DP + N E T GVGT+SYASPEQ+ YG +D+FSLGL+LLEL C F T HER AFQ +R+ P + + P VA L +T P++RP+A ++L
Sbjct: 56 AFEIFRQTVRGLQHVHGKGIVHRDLKPSNIFAAEDGVFKIGDFGLSKLLRSANGGAEFDSAQQPGFRPRHLVRQSLMITAGSNSDDPTGVDQDEGKVNHGWQEPLTAGVGTSSYASPEQMVSDAYGPEADIFSLGLILLELFCIFGTEHERILAFQGVRKKR-ELPSWMKRTYPEVAALVLECTQTDPDKRPTASDIL 252
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A1W0A2Y0_9STRA (Heme regulated eukaryotic translation initiation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2Y0_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.300e-30 Identity = 77/177 (43.50%), Postives = 102/177 (57.63%), Query Frame = 1
Query: 610 VDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARL 1140
VD E+L +FRQL +G+ HVH GIIHRDLKP NVF+ +G +KIGDFGLS+ + + +DD P+ + +P NS + HT GVGT SYASPEQ+ G Y + D FSLG++LLEL C F+T ERA AF+ +R+ P +L P +A L
Sbjct: 468 VDFRESLRIFRQLVDGIQHVHDNGIIHRDLKPSNVFMTREGSIKIGDFGLSK--LLAEVMADD---------------------PMNFSYMP---NSSNANGHTQGVGTMSYASPEQVAGTHYDCKVDSFSLGIILLELFCIFSTKMERARAFKNVREDAKKVPENLLLSYPEIAEL 618
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A7S2UG86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UG86_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.660e-30 Identity = 80/198 (40.40%), Postives = 109/198 (55.05%), Query Frame = 1
Query: 625 ALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAV-------NPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEERPSAEEML 1197
A +FRQ G+ HVH KGI+HRDLKP N+F EDG KIGDFGLS+ + ++ +S+ ++ + DP + N E T GVGT+SYASPEQ+ YG +D+FSLGL+LLEL C F T HER AFQ +R+ P + + P VA L +T P++RP+A ++L
Sbjct: 602 AFEIFRQTVRGLQHVHGKGIVHRDLKPSNIFAAEDGVFKIGDFGLSKLLRSANGGAEFDSAQQPGFRPRHLVRQSLMITAGSNSDDPTGVDQDEGKVNHGWQEPLTAGVGTSSYASPEQMVSDAYGPEADIFSLGLILLELFCIFGTEHERILAFQGVRKKR-ELPSWMKRTYPEVAALVLECTQTDPDKRPTASDIL 798
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A1V9Z444_9STRA (Heme regulated eukaryotic translation initiation factor-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z444_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.800e-29 Identity = 81/183 (44.26%), Postives = 101/183 (55.19%), Query Frame = 1
Query: 592 RGVGARVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARL 1140
R VG RVD H +L LFRQL G+ HVH GIIHRDLKP NVF+ +G LKIGDFGLS+ + + +DD P+ +P + HT GVGT SYASPEQ+ G Y + D FSLG++LLEL C F T ERA A + +R+ + P LA P +A L
Sbjct: 493 RNVG-RVDFHASLRLFRQLVNGIKHVHENGIIHRDLKPSNVFMTREGSLKIGDFGLSK--LLAEVMADD---------------------PINRGFMPPGN---ATNGHTQGVGTMSYASPEQVAGTNYDHKVDSFSLGIILLELFCVFGTKMERAQALKDVREDPLAVPEELATTYPEIATL 648
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A7S2RPJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RPJ7_9STRA) HSP 1 Score: 130 bits (327), Expect = 6.930e-29 Identity = 76/206 (36.89%), Postives = 112/206 (54.37%), Query Frame = 1
Query: 610 VDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPH----LAKRSPAVARLAELLCRTVPEERPSAEEMLEMLDDM 1215
VD+ AL +F Q+A+GV HVH +G+IHRDLKP N F+ + G +KIGDFGLSR T GL + + D + P+ + + +T GVGT SYASPEQ+ G Y +D++SLG++L ELC +T ER F+ +R+ S P H +AK P++ +L + P ERPS+ + ++ +
Sbjct: 216 VDIPYALRMFSQIAQGVKHVHQQGLIHRDLKPSNCFIDDTGTVKIGDFGLSRESATAGLEETGDIT-----------------DDIMDGDDPKDNCLGRGQDNTAGVGTRSYASPEQMNGSDYDASTDVYSLGIILFELCYLMSTGMERHLVFKGIRR--RSFPEHWHKTVAKAFPSLHKLLMAMLSPNPSERPSSAAVANHIEAL 402
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A485L7I8_9STRA (Aste57867_17300 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7I8_9STRA) HSP 1 Score: 130 bits (327), Expect = 2.020e-28 Identity = 87/231 (37.66%), Postives = 118/231 (51.08%), Query Frame = 1
Query: 577 DGRGARGVGARVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLA-----------------ELLCRTVPE-ERPSAEEMLEMLDDM 1215
D R G GA +D + L LFRQL EG+ HVH GIIHRDLKP NVF+ DGCLKIGDFGLS+ + + ++ V ++ S+ HT GVGT SYASPEQ+ ++Y V++D +SLG++LLEL F T ERA A + +R P + ++ P +A L E L RT P+ + AEE+LE+ +
Sbjct: 472 DDRNRNGDGA-IDFEKNLALFRQLVEGLHHVHQNGIIHRDLKPSNVFMTHDGCLKIGDFGLSK----------------------------LLAEVMKQDSVFGHESTSHSDDHTQGVGTMSYASPEQVSSQQYDVKADSYSLGIILLELFAPFQTRMERAMALKDIRMDPCILPCGVTEKYPEIAHLIKYLVAPTSLRWTMEQTREYLLRTFPQVQLEKAEEVLELRQKL 673
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A1Z5K296_FISSO (Eukaryotic translation initiation factor 2-alpha kinase 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K296_FISSO) HSP 1 Score: 129 bits (323), Expect = 5.620e-28 Identity = 85/197 (43.15%), Postives = 107/197 (54.31%), Query Frame = 1
Query: 616 LHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVG-EDGCL-KIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLC-RTVPEERPSAEEML 1197
+ A +F Q+ G+ HVH KGI+HRDLKP N+F EDG + KIGDFGLS+ T + D L + V N P HT GVGTASYA+PEQ+ R YG ++D+FSLGL+LLEL C F+T HER F+ RQ G P L+K VA L C + P+ RPSA E+L
Sbjct: 410 IEVAAQVFDQIVAGLCHVHGKGIVHRDLKPANIFTSVEDGLIFKIGDFGLSKLIQTASRQGTLSTRRSFLMLDHESELRQETDDTLASKFV-LDWNDP----HTAGVGTASYAAPEQVSSREYGTKADVFSLGLILLELLCSFSTEHERLLTFRDCRQ-GRKLPTELSKYK--VASEIILSCTNSNPDLRPSAAELL 598
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: A0A024TET7_9STRA (PEK protein kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TET7_9STRA) HSP 1 Score: 129 bits (323), Expect = 6.650e-28 Identity = 73/159 (45.91%), Postives = 90/159 (56.60%), Query Frame = 1
Query: 607 RVDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSECHTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQ 1083
+VD ++L LFRQL +G+ HVH GI+HRDLKP NVF+ DG LKIGDFGLS+ + + DD+ V RR +P HT GVGT SYASPEQ+ G Y + D FSLG++LLEL F T ERADA +RQ
Sbjct: 483 KVDGDQSLRLFRQLVDGLLHVHENGIVHRDLKPSNVFLARDGSLKIGDFGLSKL-LADAMCDDDD--------------------------VRRRSQTPCDPRHTQGVGTMSYASPEQVAGTDYDAKVDSFSLGIILLELFVPFHTRMERADALTRLRQ 614
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Match: W4FQF5_9STRA (PEK protein kinase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQF5_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.080e-27 Identity = 78/190 (41.05%), Postives = 104/190 (54.74%), Query Frame = 1
Query: 610 VDLHEALYLFRQLAEGVSHVHSKGIIHRDLKPENVFVGEDGCLKIGDFGLSRTEVTTGLSSDDESSXXXXXXXXXXXXXAVNPDPLEAAIVPRRRNSPQSEC-HTTGVGTASYASPEQLQGRRYGVRSDLFSLGLVLLELCCCFTTTHERADAFQAMRQPGGSAPPHLAKRSPAVARLAELLCRTVPEER 1176
V++HE + LFRQL +G+ HVH+ GI+HRDLKP NVF+ DG LKIGDFGLS+ L +DD P P + + + HT G+GT +YASPEQ+ GR Y V+ D FSLG++LLEL F T ERADA +R+ P H+ P VA + + L + +R
Sbjct: 528 VNVHENVTLFRQLVDGLLHVHANGIVHRDLKPSNVFLARDGSLKIGDFGLSKLL----LLADDGIMRRPHD----------EPHPTDKRPTFAEEGADDDDPRHTRGIGTMAYASPEQVAGRDYDVKVDSFSLGIILLELFAPFQTRMERADALTRVRRHPCELPAHVTAVYPEVAVMIKGLVAPIAADR 703 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14679.3356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14679.3356.1 >prot_E-fasciculatus_F_contig14679.3356.1 ID=prot_E-fasciculatus_F_contig14679.3356.1|Name=mRNA_E-fasciculatus_F_contig14679.3356.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=525bp MTLCPSETLQDWLQNRNSRLSSECPGSGVLFEDDARAPSRTPPSPPPRPAback to top mRNA from alignment at E-fasciculatus_F_contig14679:103..2572+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14679.3356.1 ID=mRNA_E-fasciculatus_F_contig14679.3356.1|Name=mRNA_E-fasciculatus_F_contig14679.3356.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2470bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14679:103..2572+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14679:103..2572+ >mRNA_E-fasciculatus_F_contig14679.3356.1 ID=mRNA_E-fasciculatus_F_contig14679.3356.1|Name=mRNA_E-fasciculatus_F_contig14679.3356.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=3150bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14679:103..2572+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |