prot_E-fasciculatus_F_contig10013.33.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10013.33.1
Unique Nameprot_E-fasciculatus_F_contig10013.33.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length518
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10013.33.1 vs. uniprot
Match: D8LJY4_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJY4_ECTSI)

HSP 1 Score: 726 bits (1873), Expect = 4.110e-259
Identity = 445/539 (82.56%), Postives = 453/539 (84.04%), Query Frame = 0 
Query:    1 MPPTPHRTRVRPSPS--KSPRRRGLAAEFDDSDNDEAAFRARYHVSVRSAKNLKRAGFRGLTNPYCQLNVGRQGPYTTDVVCDSVNPSWENNRQTFEFREGKGPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQVWAGSVEIELHYIPEGEAGSPARGGRVGRPALDETD-VNGGGNSPYPPMSPSATTTT--SLASSFVKAALSLPQKPRASGGADGAAAAAAVQAELLALSPRTATRGTEKK-AVSATKSPSLAALARASSLPFTEKAXXXXCSSSSAGVDKGGGXXESGRYGSAAAAVAQEYLLPLSPRMARGAXXXXXXXXXXGE-----RGYTKGGGAGGWSWKSFFCGVVCSVLLVFGVLWAVGVP----QLGFGLRVLEDGGDGRQAVVLIHGSKISGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAAAXXXXXXXXXXXXXXXX-GGREQHVGDGGGEGDCGRWCSFS------RRLAAPLYAARRDGXXXXXXXGLGTDL 517
            MPPTPHRTRVRPSPS  KSPRRRGLAAEF DSDNDEA+  ARYHVSVRSAKNLKR GFRGLTNPYCQLNVGRQGPYTTDVV DSVNPSWENNRQTFEFRE KGPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQVWAGSVEIELHYIPEGEAGSPARGGRVGRPALDETD VN GGN+PYPPMSPS       SLASSFVKAALSLP KPR SGGA   AAAAAVQAELLALSPRTATRGTEKK A+SATKSP   ALAR SSLP TEKA XXX             XX S RYGSAAA VAQE LLPLSPRMARGA   XXXXXXX       RGY+KGG AGGWSWKSFFCGVV S LLV G LWAVGVP    QLGFGLRVLEDG +GRQAVVLIHGSKI+GLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAAAXXXXXXXXXXXXXXXX GGRE+H GD GGE DCGRWCSF       RRLAAPLYAARR+         LGTDL
Sbjct:    1 MPPTPHRTRVRPSPSTSKSPRRRGLAAEFVDSDNDEASCCARYHVSVRSAKNLKREGFRGLTNPYCQLNVGRQGPYTTDVVFDSVNPSWENNRQTFEFREAKGPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQVWAGSVEIELHYIPEGEAGSPARGGRVGRPALDETDDVNRGGNNPYPPMSPSXXXXXXXSLASSFVKAALSLPHKPRTSGGAGDGAAAAAVQAELLALSPRTATRGTEKKKAMSATKSP---ALARVSSLPGTEKAAXXXXXXXXXXXXX---XXXSDRYGSAAA-VAQEDLLPLSPRMARGAEAAXXXXXXXXXXXARGRGYSKGGSAGGWSWKSFFCGVVFSALLVLGGLWAVGVPLLSGQLGFGLRVLEDGENGRQAVVLIHGSKIAGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAAAXXXXXXXXXXXXXXXXXGGREEHTGDNGGESDCGRWCSFCXXXXXXRRLAAPLYAARRE----VGGGALGTDL 528
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10013.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJY4_ECTSI4.110e-25982.56C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 40..140
e-value: 3.5E-4
score: 29.9
IPR000008C2 domainPFAMPF00168C2coord: 41..130
e-value: 2.4E-9
score: 37.4
IPR000008C2 domainPROSITEPS50004C2coord: 26..125
score: 11.315
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 38..172
e-value: 6.7E-14
score: 54.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..351
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..375
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 376..517
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 41..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10013contigE-fasciculatus_F_contig10013:215..4435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10013.33.1mRNA_E-fasciculatus_F_contig10013.33.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10013 215..4435 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10013.33.1 ID=prot_E-fasciculatus_F_contig10013.33.1|Name=mRNA_E-fasciculatus_F_contig10013.33.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=518bp
MPPTPHRTRVRPSPSKSPRRRGLAAEFDDSDNDEAAFRARYHVSVRSAKN
LKRAGFRGLTNPYCQLNVGRQGPYTTDVVCDSVNPSWENNRQTFEFREGK
GPQEDKLTLACFNSGDVPELIGRLSVALSHATHKVISLPMFRKDLGGSQV
WAGSVEIELHYIPEGEAGSPARGGRVGRPALDETDVNGGGNSPYPPMSPS
ATTTTSLASSFVKAALSLPQKPRASGGADGAAAAAAVQAELLALSPRTAT
RGTEKKAVSATKSPSLAALARASSLPFTEKAAASSCSSSSAGVDKGGGGG
ESGRYGSAAAAVAQEYLLPLSPRMARGAEAAVAAAAAAGERGYTKGGGAG
GWSWKSFFCGVVCSVLLVFGVLWAVGVPQLGFGLRVLEDGGDGRQAVVLI
HGSKISGLADRHLVVFVGEQEVCRGGVPAPAPPTEGSSWAYDLWSSDSAA
AAAGDGGDGGKGRNGRGGGREQHVGDGGGEGDCGRWCSFSRRLAAPLYAA
RRDGGGGGGGGGLGTDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom