mRNA_E-fasciculatus_F_contig14666.3348.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: D8LF98_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF98_ECTSI) HSP 1 Score: 490 bits (1261), Expect = 1.150e-170 Identity = 280/307 (91.21%), Postives = 285/307 (92.83%), Query Frame = 1
Query: 1 KMGKVRDAMKRQLDCSRALCLACADLGNACSDVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDAA-RAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXPGTGSFKAPXXXXXXXSWWDKHSATADTQPAAASSGWGAGAK 918
K+GKVRDAMKRQLDCSRALCLACADLGNACS+VGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSD AKLSNNEAKLTAARQRLQEAT KLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSA+SVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDA+ RAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXX XXXXXXX ADTQPAAA+SGWGAG K
Sbjct: 88 KVGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQPAAAASGWGAGTK 394
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: A0A835YV50_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV50_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.890e-61 Identity = 105/195 (53.85%), Postives = 137/195 (70.26%), Query Frame = 1
Query: 1 KMGKVRDAMKRQLDCSRALCLACADLGNACSDVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDPQEVAREIESVGKDGMNAP 585
K+ KVRD+MK LD +RA+ DL NAC D RD F Q QLD+ MR LD +V KA++SL+ K+APF ELD+ + +RN LKLDYDHY+RKVR+LKEK G+D +K++NNE KL AAR + +AT +YK F YYDAVGG L PE+E K AQ+ F+ +A + VK VP RDP +VA E++ +G+DG N P
Sbjct: 80 KVCKVRDSMKALLDATRAMSQRAVDLSNACGDADARDQDFITTQLQLDQAMRSMLDDSVGKALDSLDRKLAPFKELDERVKTRNNLKLDYDHYVRKVRELKEKSGADASKIANNEMKLEAARVAVHKATLSVYKAFNYYDAVGGRLVAPEVEAFKAAQRAFYMAALNCVKDVPLRDPVQVAAEVDRLGEDGSNRP 274
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: A0A485K280_9STRA (Aste57867_199 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K280_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 1.030e-5 Identity = 40/141 (28.37%), Postives = 70/141 (49.65%), Query Frame = 1
Query: 166 DAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDP--------QEVAREIESVG 564
D V A+ L+ +A ++ +R +LKLD+D Y R+ R L + A+ + E KL AR + T +LY+ F Y+ T+ E+EM++QA F + V++ +P P +E+ RE++++G
Sbjct: 323 DIVVGGAIRCLDTHIAKIESYRPLMATRAELKLDFDSYDRRARQL-----APSARKARVETKLMEARVAFESCTLQLYRVFARYENERATMLHGELEMVRQALHAFLETQAKVMQ-IPIDPPAAPCMTKEEELFREMKTMG 457
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: A0A6G0WWC6_9STRA (BAR domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWC6_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 5.780e-5 Identity = 35/134 (26.12%), Postives = 63/134 (47.01%), Query Frame = 1
Query: 187 VESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDPQEVAREIESVGKDGMNAPF 588
V +++ K+ K + R +LKLDYD +RK+R +E + A + + KL AA+ +L E+T+ + + GT+ Q E++ +Q Q FF S G P ++ + + + + PF
Sbjct: 139 VANMQTKLDELHGFKKELEHRERLKLDYDSAVRKLRHAREH--REAADVLRRDQKLQAAQAKLAESTALMVAKMKECEGTRGTMLQREVDDFRQMQAQFFQLCVSAFTGPPPPPRHAMSSKADEISQAEATNPF 270 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14666.3348.1 >prot_E-fasciculatus_F_contig14666.3348.1 ID=prot_E-fasciculatus_F_contig14666.3348.1|Name=mRNA_E-fasciculatus_F_contig14666.3348.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=309bp MGKVRDAMKRQLDCSRALCLACADLGNACSDVGLRDVGFQNAQFQLDEDMback to top mRNA from alignment at E-fasciculatus_F_contig14666:68..2812+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14666.3348.1 ID=mRNA_E-fasciculatus_F_contig14666.3348.1|Name=mRNA_E-fasciculatus_F_contig14666.3348.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2745bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14666:68..2812+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14666:68..2812+ >mRNA_E-fasciculatus_F_contig14666.3348.1 ID=mRNA_E-fasciculatus_F_contig14666.3348.1|Name=mRNA_E-fasciculatus_F_contig14666.3348.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1854bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14666:68..2812+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |