prot_E-fasciculatus_F_contig14666.3348.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14666.3348.1
Unique Nameprot_E-fasciculatus_F_contig14666.3348.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length309
Homology
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: D8LF98_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF98_ECTSI)

HSP 1 Score: 488 bits (1257), Expect = 4.470e-170
Identity = 279/306 (91.18%), Postives = 284/306 (92.81%), Query Frame = 0
Query:    1 MGKVRDAMKRQLDCSRALCLACADLGNACSDVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDAA-RAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXPGTGSFKAPXXXXXXXSWWDKHSATADTQPAAASSGWGAGAK 305
            +GKVRDAMKRQLDCSRALCLACADLGNACS+VGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSD AKLSNNEAKLTAARQRLQEAT KLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSA+SVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDA+ RAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXX         XXXXXXX         ADTQPAAA+SGWGAG K
Sbjct:   89 VGKVRDAMKRQLDCSRALCLACADLGNACSEVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDAAKLSNNEAKLTAARQRLQEATGKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAFSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPASEYGSSGGGGLSNMSGMSGAIKDASTRAGGDDSPDRSPASAYVPSASAPWLTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADTQPAAAASGWGAGTK 394          
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: A0A835YV50_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV50_9STRA)

HSP 1 Score: 209 bits (533), Expect = 5.110e-61
Identity = 104/192 (54.17%), Postives = 135/192 (70.31%), Query Frame = 0
Query:    3 KVRDAMKRQLDCSRALCLACADLGNACSDVGLRDVGFQNAQFQLDEDMRKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDPQEVAREIESVGKDGMNAP 194
            KVRD+MK  LD +RA+     DL NAC D   RD  F   Q QLD+ MR  LD +V KA++SL+ K+APF ELD+ + +RN LKLDYDHY+RKVR+LKEK G+D +K++NNE KL AAR  + +AT  +YK F YYDAVGG L  PE+E  K AQ+ F+ +A + VK VP RDP +VA E++ +G+DG N P
Sbjct:   83 KVRDSMKALLDATRAMSQRAVDLSNACGDADARDQDFITTQLQLDQAMRSMLDDSVGKALDSLDRKLAPFKELDERVKTRNNLKLDYDHYVRKVRELKEKSGADASKIANNEMKLEAARVAVHKATLSVYKAFNYYDAVGGRLVAPEVEAFKAAQRAFYMAALNCVKDVPLRDPVQVAAEVDRLGEDGSNRP 274          
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: A0A485K280_9STRA (Aste57867_199 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K280_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.020e-5
Identity = 40/141 (28.37%), Postives = 70/141 (49.65%), Query Frame = 0
Query:   55 DAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDP--------QEVAREIESVG 187
            D  V  A+  L+  +A       ++ +R +LKLD+D Y R+ R L     +  A+ +  E KL  AR   +  T +LY+ F  Y+    T+   E+EM++QA   F  +   V++ +P   P        +E+ RE++++G
Sbjct:  323 DIVVGGAIRCLDTHIAKIESYRPLMATRAELKLDFDSYDRRARQL-----APSARKARVETKLMEARVAFESCTLQLYRVFARYENERATMLHGELEMVRQALHAFLETQAKVMQ-IPIDPPAAPCMTKEEELFREMKTMG 457          
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Match: A0A6G0WWC6_9STRA (BAR domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWC6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 5.740e-5
Identity = 35/134 (26.12%), Postives = 63/134 (47.01%), Query Frame = 0
Query:   62 VESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLKEKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEIEMLKQAQQGFFGSAYSVVKGVPARDPQEVAREIESVGKDGMNAPF 195
            V +++ K+       K +  R +LKLDYD  +RK+R  +E    + A +   + KL AA+ +L E+T+ +       +   GT+ Q E++  +Q Q  FF    S   G P      ++ + + + +     PF
Sbjct:  139 VANMQTKLDELHGFKKELEHRERLKLDYDSAVRKLRHAREH--REAADVLRRDQKLQAAQAKLAESTALMVAKMKECEGTRGTMLQREVDDFRQMQAQFFQLCVSAFTGPPPPPRHAMSSKADEISQAEATNPF 270          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14666.3348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF98_ECTSI4.470e-17091.18SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YV50_9STRA5.110e-6154.17SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A485K280_9STRA1.020e-528.37Aste57867_199 protein n=1 Tax=Aphanomyces stellatu... [more]
A0A6G0WWC6_9STRA5.740e-526.12BAR domain-containing protein n=1 Tax=Aphanomyces ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..130
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availablePANTHERPTHR47174FAMILY NOT NAMEDcoord: 42..172
NoneNo IPR availablePANTHERPTHR47174:SF3BRIDGING INTEGRATOR 3coord: 42..172
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 1..172
e-value: 4.9E-17
score: 64.2
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 4..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14666contigE-fasciculatus_F_contig14666:71..2812 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14666.3348.1mRNA_E-fasciculatus_F_contig14666.3348.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14666 68..2812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14666.3348.1 ID=prot_E-fasciculatus_F_contig14666.3348.1|Name=mRNA_E-fasciculatus_F_contig14666.3348.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=309bp
MGKVRDAMKRQLDCSRALCLACADLGNACSDVGLRDVGFQNAQFQLDEDM
RKQLDAAVAKAVESLENKMAPFAELDKMIMSRNKLKLDYDHYMRKVRDLK
EKPGSDVAKLSNNEAKLTAARQRLQEATSKLYKGFGYYDAVGGTLCQPEI
EMLKQAQQGFFGSAYSVVKGVPARDPQEVAREIESVGKDGMNAPFTLPAS
EYGSSGGGGLSNMSGMSGAIKDAARAGGDDSPDRSPASAYVPSASAPWLT
GGSSGGGGVAGASPGTGSFKAPPAGGGGSSWWDKHSATADTQPAAASSGW
GAGAKVRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf