mRNA_E-fasciculatus_F_contig14625.3331.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: D8LGQ2_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ2_ECTSI) HSP 1 Score: 238 bits (607), Expect = 4.350e-74 Identity = 138/170 (81.18%), Postives = 141/170 (82.94%), Query Frame = 1
Query: 172 MLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADKEEAKAGGEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDSGEVLHKGPMLGELPALGRPPGAS 681
MLLEN SDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIR+LLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADKE XXXXXXXXXXX XXX P+ GEVLHKGPMLGELPALGRPP +S
Sbjct: 1 MLLENESDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADKEXXXXXXX-XXXXXXXXXXXXASSPSRSRSPQGRAGSXXXGPEGGEVLHKGPMLGELPALGRPPVSS 169
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A6H5JAZ1_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ1_9PHAE) HSP 1 Score: 148 bits (374), Expect = 1.870e-39 Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 1
Query: 322 MPYNMTSFQPIRNLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADKEEAKAGGEGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDSGEVLHKGPMLGELPALGRPPGAS 681
MPYNMTSFQPIR+LLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEAD EE KAGGE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PD GEVLHKGPMLGELPALGRPP +S
Sbjct: 1 MPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADNEEEKAGGE-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPDGGEVLHKGPMLGELPALGRPPVSS 119
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A7S3ZT12_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT12_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.990e-31 Identity = 64/137 (46.72%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 1 EVCHRGFTAIAPLLVRAGADAAHIPDAKASCGAHIMRGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAAKTMPTP 411
E CHRGF I L+ HIPD +AS + + PQSALG A+R GF+ I K+LLE GSDKD N +GWTPLHEA ++NH+D + LLV+GA+ T K+ +GA+P+++ S +R++L+E+GG +A P
Sbjct: 180 EACHRGFDGIVRKLLTGNKTLDHIPDVEASKAFPLAKPPPQSALGEASRCGFEDIVKVLLEAGSDKDLVNHLGWTPLHEAAFYNHVDVARTLLVYGANATKKDARGAVPFHVASLPSVRDVLKELGGPDACPERDCP 316
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A7S1TU65_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU65_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.770e-27 Identity = 58/120 (48.33%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 67 HIPDAKASCGAHIMRGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAA-KTMPTPTFSV 423
HIPD + G+ ++ P +ALG AAR GF I K+L+E G+DKD N GWTPLHEA + NHL TV+ LL++GA+PTI+N +GA+PY + + +R +REI GE+A ++MP + V
Sbjct: 223 HIPDDECLSGSPFLQAPPTTALGEAARCGFSAIIKVLVEAGADKDLANHEGWTPLHEAAFHNHLGTVKTLLIYGANPTIRNKKGALPYQLAALPAVRTTIREIWGEDAVDESMPNLSAGV 342
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A6H5JEM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM2_9PHAE) HSP 1 Score: 102 bits (255), Expect = 3.280e-24 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1
Query: 1 EVCHRGFTAIAPLLVRAGADAAHIPDAKASCGAHIMRGAPQSALGAAARGGFQTI 165
EVCHRGFTAIA LLV+AGAD AHIPDAKASCGAHIMRGAPQSALGAAARGGFQT+
Sbjct: 75 EVCHRGFTAIAALLVKAGADVAHIPDAKASCGAHIMRGAPQSALGAAARGGFQTV 129
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A7S2XYQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ7_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 8.300e-14 Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 1
Query: 67 HIPDAKASCGAHIMRGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAAKTMPTPTFSV 423
++PD +S +R Q AL KD+ N +GWTPLHEA +F + VQ LLV+G D T K GAM Y++ S I+ +++++GG EAA M P SV
Sbjct: 189 YLPDIDSSTATPFVRAPAQHALAXXXXXXXXXXXXXXXXXXXPKDKANQLGWTPLHEAAFFCQKEIVQTLLVYGVDATAKTSMGAMAYHLASLPDIKQVIKDLGGAEAAVEMDQPLKSV 307
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A1I4DZU2_9RHOB (Ankyrin repeat n=1 Tax=Loktanella salsilacus TaxID=195913 RepID=A0A1I4DZU2_9RHOB) HSP 1 Score: 60.5 bits (145), Expect = 3.740e-7 Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 109 RGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRN------LLREIGG 381
+G +A+ AAR G +C++LLE G+ DQ T L AC NH++TVQLLL HGADP +N +G P + S + N LR+ GG
Sbjct: 269 KGLKWAAIHLAARYGRTDLCQVLLEAGASVDQLGDSSHTALMLACEENHVETVQLLLEHGADPHRENAKGRTPERL-SLNALGNATETTLFLRQAGG 364
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A1S8B4U0_9PEZI (Ankyrin-1 (Fragment) n=1 Tax=Diplodia seriata TaxID=420778 RepID=A0A1S8B4U0_9PEZI) HSP 1 Score: 56.6 bits (135), Expect = 1.050e-5 Identity = 30/83 (36.14%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 124 SALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLRE 372
+AL AA+ G Q I + LL G++ + + TPL +AC NHL V++LL HGA+P + ++ + P+ + + I LLR+
Sbjct: 604 TALHLAAQQGHQRIVRWLLGLGANVNSRDPFNRTPLFDACIRNHLGVVEILLDHGANPDVLDINASRPFEAATKEEICTLLRK 686
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A6B2LXD6_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LXD6_9EUKA) HSP 1 Score: 50.8 bits (120), Expect = 1.990e-5 Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 1
Query: 172 MLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMP 327
MLL++G++ D P+ G T LH AC N D V LL+H ADPTIKNV P
Sbjct: 1 MLLKHGANPDIPDKGGNTALHCACRNNFNDVVSSLLLHSADPTIKNVWEQTP 52
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Match: A0A158Q9G7_ENTVE (Eukaryotic translation initiation factor 3 subunit K n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A158Q9G7_ENTVE) HSP 1 Score: 55.5 bits (132), Expect = 2.620e-5 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 124 SALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQG 318
+AL AA G + + ML ENG+ + N G TPLH+A NH V+ LL+HGADP+IK+ G
Sbjct: 87 TALHWAASFGTEEVVSMLCENGASVNALNAKGETPLHDAVRRNHDGVVRNLLLHGADPSIKDANG 151 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14625.3331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14625.3331.1 >prot_E-fasciculatus_F_contig14625.3331.1 ID=prot_E-fasciculatus_F_contig14625.3331.1|Name=mRNA_E-fasciculatus_F_contig14625.3331.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=227bp EVCHRGFTAIAPLLVRAGADAAHIPDAKASCGAHIMRGAPQSALGAAARGback to top mRNA from alignment at E-fasciculatus_F_contig14625:141..3266+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14625.3331.1 ID=mRNA_E-fasciculatus_F_contig14625.3331.1|Name=mRNA_E-fasciculatus_F_contig14625.3331.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3126bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14625:141..3266+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14625:141..3266+ >mRNA_E-fasciculatus_F_contig14625.3331.1 ID=mRNA_E-fasciculatus_F_contig14625.3331.1|Name=mRNA_E-fasciculatus_F_contig14625.3331.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1362bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14625:141..3266+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |