mRNA_E-fasciculatus_F_contig14612.3323.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: D7FJQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ9_ECTSI) HSP 1 Score: 262 bits (669), Expect = 3.150e-86 Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 1
Query: 1 QASARSTSTSXXXXCRMTKE-ETETEEGGKKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
+ASAR TS++ CRMTK+ ETE EG KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGN+GFIVSRRAAKT+EWQEIASYKDFPPLNSKG
Sbjct: 44 KASARGTSSTS---CRMTKKTETEGAEGDKKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKG 192
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A835Z5V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V8_9STRA) HSP 1 Score: 166 bits (419), Expect = 2.050e-48 Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 1
Query: 97 KPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
K P WM+N +GVAYAPWMVD FDPEN+AKV A++EAR+ + NTV E++G LARDPQ MELSG GL+ K+V+ VEL WKTG+E GN+GF+VS+R KT+EW +IASYKD+ PLNSKG
Sbjct: 70 KGPTWMYNKNGVAYAPWMVDTFDPENIAKVEAAMEARRLAKLNTVAESVGDLARDPQAMELSGLGLNIKQVNGNDVELEWKTGDEAGNLGFVVSKRRGKTDEWTQIASYKDWAPLNSKG 188
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A6V1RAY1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RAY1_HETAK) HSP 1 Score: 114 bits (285), Expect = 2.240e-28 Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1
Query: 85 KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
+K+ K P MFN +G YAPWM+D+ D E + ARK E A GAL DPQ MELSG GL K V DE E++W TG+E GN GFI+++R +++WQ +ASY D+ PLNSKG
Sbjct: 65 EKRRKAPKGMFNAEGKPYAPWMMDSVDAEKAKQAQEDRRARKAAEKKA---AQGALLVDPQAMELSGVGLKTKMVGDEC-EISWGTGDETGNKGFIITKRRGGSDDWQVVASYTDWAPLNSKG 183
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S3ZJZ7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJZ7_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.040e-21 Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 1
Query: 112 MFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
++N++GVAYAPWMV D + +A A K +E + E G + D EL+G GL AK +S++ VELTW T +EE N GF+V R+A +W E+ASY+ + PL SKG
Sbjct: 91 LYNEEGVAYAPWMVRQVDEDAVAAARAMRGYEKRRERIALEEKQGTINILDAASSELTGLGLKAKVLSEDEVELTWSTDDEEANRGFLVERKAVGYSDWDEVASYQSWSPLKSKG 205
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2FT64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT64_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 5.950e-20 Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 112 MFNDDGVAYAPWMVDAFDPENL--AKVAASIEARKEKEANTVPEALGA-LARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
MFN++GVAYAPWMV+ D E AK + +K A+ E GA D Q ELSG GL+ K ++ E VEL+W T E N+G+ V +RAA++EEW +ASY+D+ PLNSKG
Sbjct: 90 MFNENGVAYAPWMVNQIDEEAYVTAKELRKMRKNAQKAADASKE--GAYFTTDLQADELSGLGLNYK-LNGEEVELSWSTDTEPDNLGYKVQKRAARSEEWFTVASYEDWAPLNSKG 203
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2RGG7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGG7_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.540e-19 Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 1
Query: 112 MFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
M+N++GVAYAPWMV+ D E + RK+++ +GA+ + D EL+G+GL + V +E VEL+W T E N+G+ V +R A++E+W +IASY+D+ PL SKG
Sbjct: 76 MYNENGVAYAPWMVNQIDEEAYLAAKELRKMRKKRDREASEAKIGAMVSSDVAADELAGSGLKYRFVGEE-VELSWSTNTEPDNLGYKVQKRVARSEDWIDIASYEDWAPLASKG 189
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2ZH41_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH41_9RHOD) HSP 1 Score: 89.7 bits (221), Expect = 4.870e-19 Identity = 52/124 (41.94%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 85 KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPP-LNSKG 453
KKK A M+ DG AYAPWMV A IE + +A+G+L DPQ EL+G GL K + DE++ LTW TG+E N GF++ +R KT+EW +IA + P L SKG
Sbjct: 93 KKKVGGKASMYRSDGTAYAPWMVGAI-----------IEDVDSMGVKSKSDAVGSLRTDPQAQELAGVGLKYKSLGDELL-LTWSTGSERSNQGFVIRKRKGKTDEWIKIADFDSHPAELTSKG 204
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: F0Y2G8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2G8_AURAN) HSP 1 Score: 92.4 bits (228), Expect = 6.770e-19 Identity = 51/115 (44.35%), Postives = 67/115 (58.26%), Query Frame = 1
Query: 112 MFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
MFN++GVAYAPWMV+ D + + A + +K E + E G + D ELSG GL AK V D VEL W T +EE N GF+V ++ EW+E+ASY + PL SKG
Sbjct: 69 MFNENGVAYAPWMVNQVDEDAVNIARAMRKDKKRVERLAMLEKQGTVNILDAATSELSGIGLKAKCVDDGEVELLWGTNDEEDNKGFVVEKKLVGRSEWEEVASYSSWSPLKSKG 183
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2ZH05_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH05_9RHOD) HSP 1 Score: 89.7 bits (221), Expect = 9.110e-19 Identity = 52/124 (41.94%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 85 KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPP-LNSKG 453
KKK A M+ DG AYAPWMV A IE + +A+G+L DPQ EL+G GL K + DE++ LTW TG+E N GF++ +R KT+EW +IA + P L SKG
Sbjct: 93 KKKVGGKASMYRSDGTAYAPWMVGAI-----------IEDVDSMGVKSKSDAVGSLRTDPQAQELAGVGLKYKSLGDELL-LTWSTGSERSNQGFVIRKRKGKTDEWIKIADFDSHPAELTSKG 204
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: B8BXV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV5_THAPS) HSP 1 Score: 89.0 bits (219), Expect = 9.930e-19 Identity = 59/125 (47.20%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 91 KTKPPAWMFNDDGVAYAPWMVDAFDPEN----LAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
K K + + N++GV YAPWM + D EN L K + +E +A V G L RD Q ELSG GLS K + E VEL W T +E GFIV RRAAKT ++ IASYKD+ PL SKG
Sbjct: 49 KNKRMSNLRNENGVDYAPWMGISEDDENKIRALMKERTAARRARELQARDVT---GNLFRDSQAQELSGTGLSYKIIDGE-VELEWATKSEMDTKGFIVKRRAAKTNDYDVIASYKDWGPLASKG 169 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14612.3323.1 >prot_E-fasciculatus_F_contig14612.3323.1 ID=prot_E-fasciculatus_F_contig14612.3323.1|Name=mRNA_E-fasciculatus_F_contig14612.3323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=102bp MPSTPRTWLRWRPRSKLARKRRRTRCRRRWEPLHATRNRWNSQAQACPPRback to top mRNA from alignment at E-fasciculatus_F_contig14612:127..2545- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14612.3323.1 ID=mRNA_E-fasciculatus_F_contig14612.3323.1|Name=mRNA_E-fasciculatus_F_contig14612.3323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2419bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14612:127..2545- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14612:127..2545- >mRNA_E-fasciculatus_F_contig14612.3323.1 ID=mRNA_E-fasciculatus_F_contig14612.3323.1|Name=mRNA_E-fasciculatus_F_contig14612.3323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=612bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14612:127..2545- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |