mRNA_E-fasciculatus_F_contig14612.3323.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14612.3323.1
Unique NamemRNA_E-fasciculatus_F_contig14612.3323.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: D7FJQ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ9_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 3.150e-86
Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 1
Query:    1 QASARSTSTSXXXXCRMTKE-ETETEEGGKKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            +ASAR TS++    CRMTK+ ETE  EG KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGN+GFIVSRRAAKT+EWQEIASYKDFPPLNSKG
Sbjct:   44 KASARGTSSTS---CRMTKKTETEGAEGDKKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNIGFIVSRRAAKTDEWQEIASYKDFPPLNSKG 192          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A835Z5V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V8_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.050e-48
Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = 1
Query:   97 KPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            K P WM+N +GVAYAPWMVD FDPEN+AKV A++EAR+  + NTV E++G LARDPQ MELSG GL+ K+V+   VEL WKTG+E GN+GF+VS+R  KT+EW +IASYKD+ PLNSKG
Sbjct:   70 KGPTWMYNKNGVAYAPWMVDTFDPENIAKVEAAMEARRLAKLNTVAESVGDLARDPQAMELSGLGLNIKQVNGNDVELEWKTGDEAGNLGFVVSKRRGKTDEWTQIASYKDWAPLNSKG 188          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A6V1RAY1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RAY1_HETAK)

HSP 1 Score: 114 bits (285), Expect = 2.240e-28
Identity = 60/123 (48.78%), Postives = 77/123 (62.60%), Query Frame = 1
Query:   85 KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            +K+ K P  MFN +G  YAPWM+D+ D E   +      ARK  E      A GAL  DPQ MELSG GL  K V DE  E++W TG+E GN GFI+++R   +++WQ +ASY D+ PLNSKG
Sbjct:   65 EKRRKAPKGMFNAEGKPYAPWMMDSVDAEKAKQAQEDRRARKAAEKKA---AQGALLVDPQAMELSGVGLKTKMVGDEC-EISWGTGDETGNKGFIITKRRGGSDDWQVVASYTDWAPLNSKG 183          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S3ZJZ7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJZ7_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.040e-21
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 1
Query:  112 MFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            ++N++GVAYAPWMV   D + +A   A     K +E   + E  G +   D    EL+G GL AK +S++ VELTW T +EE N GF+V R+A    +W E+ASY+ + PL SKG
Sbjct:   91 LYNEEGVAYAPWMVRQVDEDAVAAARAMRGYEKRRERIALEEKQGTINILDAASSELTGLGLKAKVLSEDEVELTWSTDDEEANRGFLVERKAVGYSDWDEVASYQSWSPLKSKG 205          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2FT64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FT64_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.950e-20
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 1
Query:  112 MFNDDGVAYAPWMVDAFDPENL--AKVAASIEARKEKEANTVPEALGA-LARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            MFN++GVAYAPWMV+  D E    AK    +    +K A+   E  GA    D Q  ELSG GL+ K ++ E VEL+W T  E  N+G+ V +RAA++EEW  +ASY+D+ PLNSKG
Sbjct:   90 MFNENGVAYAPWMVNQIDEEAYVTAKELRKMRKNAQKAADASKE--GAYFTTDLQADELSGLGLNYK-LNGEEVELSWSTDTEPDNLGYKVQKRAARSEEWFTVASYEDWAPLNSKG 203          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2RGG7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGG7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.540e-19
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 1
Query:  112 MFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            M+N++GVAYAPWMV+  D E         + RK+++       +GA+ + D    EL+G+GL  + V +E VEL+W T  E  N+G+ V +R A++E+W +IASY+D+ PL SKG
Sbjct:   76 MYNENGVAYAPWMVNQIDEEAYLAAKELRKMRKKRDREASEAKIGAMVSSDVAADELAGSGLKYRFVGEE-VELSWSTNTEPDNLGYKVQKRVARSEDWIDIASYEDWAPLASKG 189          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2ZH41_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH41_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 4.870e-19
Identity = 52/124 (41.94%), Postives = 68/124 (54.84%), Query Frame = 1
Query:   85 KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPP-LNSKG 453
            KKK    A M+  DG AYAPWMV A            IE        +  +A+G+L  DPQ  EL+G GL  K + DE++ LTW TG+E  N GF++ +R  KT+EW +IA +   P  L SKG
Sbjct:   93 KKKVGGKASMYRSDGTAYAPWMVGAI-----------IEDVDSMGVKSKSDAVGSLRTDPQAQELAGVGLKYKSLGDELL-LTWSTGSERSNQGFVIRKRKGKTDEWIKIADFDSHPAELTSKG 204          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: F0Y2G8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2G8_AURAN)

HSP 1 Score: 92.4 bits (228), Expect = 6.770e-19
Identity = 51/115 (44.35%), Postives = 67/115 (58.26%), Query Frame = 1
Query:  112 MFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGAL-ARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            MFN++GVAYAPWMV+  D + +    A  + +K  E   + E  G +   D    ELSG GL AK V D  VEL W T +EE N GF+V ++     EW+E+ASY  + PL SKG
Sbjct:   69 MFNENGVAYAPWMVNQVDEDAVNIARAMRKDKKRVERLAMLEKQGTVNILDAATSELSGIGLKAKCVDDGEVELLWGTNDEEDNKGFVVEKKLVGRSEWEEVASYSSWSPLKSKG 183          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: A0A7S2ZH05_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZH05_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 9.110e-19
Identity = 52/124 (41.94%), Postives = 68/124 (54.84%), Query Frame = 1
Query:   85 KKKTKPPAWMFNDDGVAYAPWMVDAFDPENLAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPP-LNSKG 453
            KKK    A M+  DG AYAPWMV A            IE        +  +A+G+L  DPQ  EL+G GL  K + DE++ LTW TG+E  N GF++ +R  KT+EW +IA +   P  L SKG
Sbjct:   93 KKKVGGKASMYRSDGTAYAPWMVGAI-----------IEDVDSMGVKSKSDAVGSLRTDPQAQELAGVGLKYKSLGDELL-LTWSTGSERSNQGFVIRKRKGKTDEWIKIADFDSHPAELTSKG 204          
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Match: B8BXV5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXV5_THAPS)

HSP 1 Score: 89.0 bits (219), Expect = 9.930e-19
Identity = 59/125 (47.20%), Postives = 72/125 (57.60%), Query Frame = 1
Query:   91 KTKPPAWMFNDDGVAYAPWMVDAFDPEN----LAKVAASIEARKEKEANTVPEALGALARDPQQMELSGAGLSAKRVSDEMVELTWKTGNEEGNVGFIVSRRAAKTEEWQEIASYKDFPPLNSKG 453
            K K  + + N++GV YAPWM  + D EN    L K   +    +E +A  V    G L RD Q  ELSG GLS K +  E VEL W T +E    GFIV RRAAKT ++  IASYKD+ PL SKG
Sbjct:   49 KNKRMSNLRNENGVDYAPWMGISEDDENKIRALMKERTAARRARELQARDVT---GNLFRDSQAQELSGTGLSYKIIDGE-VELEWATKSEMDTKGFIVKRRAAKTNDYDVIASYKDWGPLASKG 169          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14612.3323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FJQ9_ECTSI3.150e-8690.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z5V8_9STRA2.050e-4865.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1RAY1_HETAK2.240e-2848.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3ZJZ7_9STRA3.040e-2143.48Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2FT64_9STRA5.950e-2047.86Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RGG7_9STRA3.540e-1941.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2ZH41_9RHOD4.870e-1941.94Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
F0Y2G8_AURAN6.770e-1944.35Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2ZH05_9RHOD9.110e-1941.94Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
B8BXV5_THAPS9.930e-1947.20Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14612contigE-fasciculatus_F_contig14612:127..2545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size460
Cds size306
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14612.3323.1prot_E-fasciculatus_F_contig14612.3323.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14612 127..2391 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927948.1360602-CDS-E-fasciculatus_F_contig14612:126..3161622927948.1360602-CDS-E-fasciculatus_F_contig14612:126..316Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14612 127..316 -
1695995762.2820077-CDS-E-fasciculatus_F_contig14612:126..3161695995762.2820077-CDS-E-fasciculatus_F_contig14612:126..316Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14612 127..316 -
1622927948.1521084-CDS-E-fasciculatus_F_contig14612:1423..15221622927948.1521084-CDS-E-fasciculatus_F_contig14612:1423..1522Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14612 1424..1522 -
1695995762.2925634-CDS-E-fasciculatus_F_contig14612:1423..15221695995762.2925634-CDS-E-fasciculatus_F_contig14612:1423..1522Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14612 1424..1522 -
1622927948.1781368-CDS-E-fasciculatus_F_contig14612:2374..23911622927948.1781368-CDS-E-fasciculatus_F_contig14612:2374..2391Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14612 2375..2391 -
1695995762.3052309-CDS-E-fasciculatus_F_contig14612:2374..23911695995762.3052309-CDS-E-fasciculatus_F_contig14612:2374..2391Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14612 2375..2391 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927948.1996467-UTR-E-fasciculatus_F_contig14612:2391..25451622927948.1996467-UTR-E-fasciculatus_F_contig14612:2391..2545Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14612 2392..2545 -
1695995762.3153403-UTR-E-fasciculatus_F_contig14612:2391..25451695995762.3153403-UTR-E-fasciculatus_F_contig14612:2391..2545Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig14612 2392..2545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14612.3323.1

>prot_E-fasciculatus_F_contig14612.3323.1 ID=prot_E-fasciculatus_F_contig14612.3323.1|Name=mRNA_E-fasciculatus_F_contig14612.3323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=102bp
MPSTPRTWLRWRPRSKLARKRRRTRCRRRWEPLHATRNRWNSQAQACPPR
GCRTRWWSSPGRRGTRRGTSVSSSAGGPLRPKSGRRSRRTKTSPHSTPRG
E*
back to top

mRNA from alignment at E-fasciculatus_F_contig14612:127..2545-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14612.3323.1 ID=mRNA_E-fasciculatus_F_contig14612.3323.1|Name=mRNA_E-fasciculatus_F_contig14612.3323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2419bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14612:127..2545- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGGCCTCAGCGCGCAGCACCAGCACCAGCAGCAGCACCAGTTGCAGGAT GACCAAGGAAGAGACGGAGACGGAGGAGGGAGGCAAGAAGAAGACCAAGC CGCCGGCGTGGATGTTCAACGACGACGGCGTTGCCTACGCGCCGTGGATG GTGGATGCCTTCGACCCCGAGGTACCATAGCACTAGTTGGATGGTTTCAT GTACTGTATGCATATACGTTCTTTGTTGTTGTACATACCCCCGTGACCAC CCACGGAGGTTGCCGTGCCTACCCACGGTATGTCGTCTGTTTGGGGACTG TGTTAACCCAGGACCGATGCATATGATGTATGACCTTGGTTATCACACAC ACGTGCTCTTCCAGCACACACGCGAACAACGAGTAAGCACATGCGCGGGC TCTCACGAGGGGCCCTGCACTTGGACCCCCAACAGCATACCCACACGTAC TCTGCAGAACCGATCTTGTATCCAAGTACCCCAAACATTGTTTTCTTCTG TTTTAAGAAATATACAATCAAAGAAAGACAACTCCGTTCATGGTATAACC ATAGTGGAAGGGGATGGATTGAAGTCTTTACAGTAGTGAATGGAGGAAAA AACTGCTGGATACTGGGCTTTTGAGTCTATTTTCTCTGTACCCCAAAAGG TGTCATGATCTGAACGCCTCCAACACTACCCCGGGTCCGAGGGGAGCTCT GTCTGGGCAAGGGTAGCGGAACACAGCCGTAGCCAAAGAGGATGCCATGC CCTTGAATCTTTGGATGTTCACCTGCCGCTTTAGCAGGGAAAACAGGCAA CACCGTCCATCCATCGTGTCCCCGGACCCCGTCCAACGCAGTCAAAAACT CCGTTGCCTGTTGAAATACTCGCTGCTGTCAGGCATTAGGTACTGCTTGG TTGTATCTGGCAATGGCGTCTGTATGGAACAGCAGTTTTGAGATAAATCA GAGCAAGGTTAAGGTTTCATATGACCAAGCAAGGGTACTTTCCAACACTC CTGTCTGCTTCGATTTTTCACAGAACCTGGCTAAGGTGGCGGCCTCGATC GAAGCTCGCAAGGAAAAGGAGGCGAACACGGTGCCGGAGGCGCTGGGAGC CCTTGCACGCGACCCGCAACAGGTAGGCGTGTTGTCGAATCCAACGCCGA GGAGAGTTGTATGGGATGCAAGTGTGCCTCTGCGACGTTGGGGGCTGGCA ACTGCTGTGTTACACGTTCAGCCGTTGTTGACTCGAACGAACAACTCGAT CATGTGGTTTTTATCGATTGTATTATGTTTTTCTGGAAGATAAAATGAGT TTATACAAAAACAAGCGGCCTGACAGGAAGTATGTGGTAGATCGGAGCGG CATGCAGGCCTTCTTTTTTGCTCGCGAGGTATAAGCGAAACGTCAAAAGT CGTCGTTTTTTCGCAGCCCCGAGAGGAGTCGCACCCAAGCCAATCAAATT GTATCCCCGCCCCCTCTCCCTGCCTTCTGCCGTAGCACCGACATGTATTT TGGCTTTTACACAGAAAATAGATTTATTACTTTTGTTTTCTTTCCTAAAA AAAACACACCAAAATTCGTCTCCTCCACAGATACGAGTCTGGGACAGATT TGCAAACTTATTCGTTGCGTTGTGTGATGACCAACGTGCATTTCTGCCGT TCCCCGAGCAGTAGTGTATCTCCCGTGTGCGTAACGGGCTAATTTCGTTA TGTCTTGCCCGAAACCAACAATTTAAAATGCCGCTAACTTAGTTTGGATG GTTGACAACTGAAACAACATTGGAGATGGCTCCTCCAGGAACAGGACAGG GCGGATGCTTACCCTCAGCTGAGATGCACAACAGTCGATGGCTGGCCTAA GGGCACGCAGGCAGGCATCGCGAAAAATGCTGCCCAGCCGGTCGTGTCCC GCATCCACGCAGATGTGTATGAATACCTTTCTTTCCCCAACGCCGTGTAC AAAGCTTCTTGCCGTGAAGGGGGGGGTATCGCTCGAGTGCCTTTGCTGCA GAGTTTTCTGTCTCAAATTAGTCCTCCCATTACACACACATTGGCCAGCC GGTTAGCGCGGTCTTGCTGGCGATAAATCCACACAACCACAGTTTTCGCG TTTATTGTCCCGCTGCTGTCAGATTAACATTGTTCCGCCGGTTAAAGCGC GATCGATGTTTCTCAAAGAAAATACACACAATACCCACCACCACAACCCT GGTTCATCGCCGTCTTTCTATAAATGCAGATGGAACTCTCAGGCGCAGGC CTGTCCGCCAAGAGGGTGTCGGACGAGATGGTGGAGCTCACCTGGAAGAC GGGGAACGAGGAGGGGAACGTCGGTTTCATCGTCAGCAGGCGGGCCGCTA AGACCGAAGAGTGGCAGGAGATCGCGTCGTACAAAGACTTCCCCCCACTC AACTCCAAGGGGTGAGTGA
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14612:127..2545-

>mRNA_E-fasciculatus_F_contig14612.3323.1 ID=mRNA_E-fasciculatus_F_contig14612.3323.1|Name=mRNA_E-fasciculatus_F_contig14612.3323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=612bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14612:127..2545- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCTTCGACCCCGAGATGCCTTCGACCCCGAGAACCTGGCTAAGGTGG
CGGCCTCGATCGAAGCTCGCAAGGAAAAGGAGGCGAACACGGTGCCGGAG
GCGCTGGGAGCCCTTGCACGCGACCCGCAACAGAACCTGGCTAAGGTGGC
GGCCTCGATCGAAGCTCGCAAGGAAAAGGAGGCGAACACGGTGCCGGAGG
CGCTGGGAGCCCTTGCACGCGACCCGCAACAGATGGAACTCTCAGGCGCA
GGCCTGTCCGCCAAGAGGGTGTCGGACGAGATGGTGGAGCTCACCTGGAA
GACGGGGAACGAGGAGGGGAACGTCGGTTTCATCGTCAGCAGGCGGGCCG
CTAAGACCGAAGAGTGGCAGGAGATCGCGTCGTACAAAGACTTCCCCCCA
CTCAACTCCAAGGGGTGAGTGAATGGAACTCTCAGGCGCAGGCCTGTCCG
CCAAGAGGGTGTCGGACGAGATGGTGGAGCTCACCTGGAAGACGGGGAAC
GAGGAGGGGAACGTCGGTTTCATCGTCAGCAGGCGGGCCGCTAAGACCGA
AGAGTGGCAGGAGATCGCGTCGTACAAAGACTTCCCCCCACTCAACTCCA
AGGGGTGAGTGA
back to top