mRNA_E-fasciculatus_F_contig14608.3319.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14608.3319.1
Unique NamemRNA_E-fasciculatus_F_contig14608.3319.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: D8LSJ2_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ2_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 6.280e-143
Identity = 270/409 (66.01%), Postives = 277/409 (67.73%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNYSTKNVGHPYQQXXXXXXPYLETAALVKPGGGGEGTGTGGAMNPRGDILSPVFNRSGAVYRSSPATAXXXXXXXXXTSVLPESSPLRWRTPRQARSQSLREHTSTSSQXXXXXXXXXXXXPSPLAQSLGRTRSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKFSVSARETTGYGAMEEGGXXXXXXXXXXXXXXXXXAGVRVRRPRGASLGEEPRVGEGAVQAYMSLWANGGGGSLVDSPGLTGMTGGGGDSSPGFSGRMGRSSSVVSLLPASEERTRRVILDFSNV 1266
            +QVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPP PNAGAPATGIFGNVYDDSN ST+ VG+P QQ       YLETAALVKP    EG    GAMNPRGDILSPVFN+SGA YRSS ATA         +SVLP SSPL WR+PRQAR QSLREHTSTSSQ             SPLAQSL RTRS G T                                                           A FSV ARETTGYGAMEEGG                 AGVRVRRPRG SLGEEPRVGEGAVQAYMSLWANGGG SL DSPGLTGMTGGG DSSPGFSGRM RSSSVVSLLPAS+ERTRRVILDFSNV
Sbjct:  462 AQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPNAGAPATGIFGNVYDDSNLSTRTVGNPQQQQS-----YLETAALVKPSS--EGIIAAGAMNPRGDILSPVFNKSGAAYRSSSATAAAEAPAA--SSVLPGSSPLHWRSPRQARRQSLREHTSTSSQQQGGASSQGIS--SPLAQSLARTRSVGGTTTATSTGVPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANASSRHYGGSGG---ANFSVPARETTGYGAMEEGGAGGDGGVGSSGRAT---AGVRVRRPRGTSLGEEPRVGEGAVQAYMSLWANGGG-SLADSPGLTGMTGGG-DSSPGFSGRMARSSSVVSLLPASDERTRRVILDFSNV 851          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: D8LSJ4_ECTSI (Sulfate_transp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ4_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 5.840e-141
Identity = 278/409 (67.97%), Postives = 284/409 (69.44%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNYSTKNVGHPYQQXXXXXXPYLETAALVKPGGGGEGTGTGGAMNPRGDILSPVFNRSGAVYRSSPATAXXXXXXXXXTSVLPESSPLRWRTPRQARSQSLREHTSTSSQXXXXXXXXXXXXPSPLAQSLGRTRSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKFSVSARETTGYGAMEEGGXXXXXXXXXXXXXXXXXAGVRVRRPRGASLGEEPRVGEGAVQAYMSLWANGGGGSLVDSPGLTGMTGGGGDSSPGFSGRMGRSSSVVSLLPASEERTRRVILDFSNV 1266
            +QVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPP PNAGAPATGIFGNVYDDSN+ST+ VG+P QQ       YLETAALVKP    EGT   GAMNPRGDILSPVFNRSGAVYRSS  + XXXXXXXXX SVLP SSPL WR+P  ARSQSLREHTSTSSQ             SPLAQSL RTRS G T                                                           A FSV ARETTGYGAMEEGG                 AGVRVRRPRG SLGEEPRVGEGAVQAYMSLWANGGG S  DSPGLTGMTGGG DSSPGFSGRM RSSSVVSLLPASEERTRRVILDFSNV
Sbjct:  427 AQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPNAGAPATGIFGNVYDDSNHSTRTVGNPQQQQS-----YLETAALVKPSS--EGTIAAGAMNPRGDILSPVFNRSGAVYRSS--SXXXXXXXXXXXSVLPGSSPLHWRSP--ARSQSLREHTSTSSQQQGEPSSQGIS--SPLAQSLARTRSVGGTTTATSTGVPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANESSRHDGGSGG---ANFSVPARETTGYGAMEEGGAGGDGGVGSSGRAT---AGVRVRRPRGTSLGEEPRVGEGAVQAYMSLWANGGG-SFADSPGLTGMTGGG-DSSPGFSGRMARSSSVVSLLPASEERTRRVILDFSNV 814          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: A0A6H5KE91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE91_9PHAE)

HSP 1 Score: 402 bits (1032), Expect = 1.880e-129
Identity = 274/419 (65.39%), Postives = 282/419 (67.30%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNYSTKNVGHPYQQXXXXXXPYLETAALVKPGGGGEGTGTGGAMNPRGDILSPVFNRSGAVYRSSPATAXXXXXXXXXTS---------VLPESSPLRWRTPRQARSQSLREHTSTSSQXXXXXXXXXXXXPSPLAQSLGRTRSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKFSVSARETTGYGAMEEGGXXXXXXXXXXXXXXXXXAGVRVRRPRGASLGEEPRVGEGAVQAYMSLWANGGGGSLVDSPGLTGMTGGGGDSSPGFSGRMGRSSSVVSLLPASEERTRRVILDFSNVV 1269
            +QVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPP P  GAPATG++GNVYDDSN ST+ VG+P +Q       YLETAAL KP G  EGT    AMNPRGDILSPVFNRSGAVYRSS    XXXXXXXXX           VLP SSP RWR+PR+ARSQSLREHTSTS  XXXXX        SPLAQSL RTRS G T   X                                                       A FSV  RETTGYGAMEEGG       XXXX       GVRVR  RGASLGEE  VGEGAVQAYMSLWANGGG S  DSPGLTGMTGGG DSSPGFSGRM RS SV SLLPASEERTRRVILDFSNVV
Sbjct:   41 AQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPTPYTGAPATGLYGNVYDDSNRSTRTVGNPQKQLQQQQS-YLETAALFKPSG--EGTIAASAMNPRGDILSPVFNRSGAVYRSSSXXXXXXXXXXXXXXXXXXXXXXXVLPGSSPRRWRSPREARSQSLREHTSTSXXXXXXXSSQGIS--SPLAQSLARTRSVGGTTTTXSTGIPGAGGGRGRPFHRAGGLLPGASEQQETEKQQPAVLANGSSRHDGGSGG---ANFSVPTRETTGYGAMEEGGAGGDGGVXXXXGGA---TGVRVRHSRGASLGEEQGVGEGAVQAYMSLWANGGG-SFADSPGLTGMTGGG-DSSPGFSGRMARSCSVASLLPASEERTRRVILDFSNVV 446          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: D8LSJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ0_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 2.250e-109
Identity = 257/413 (62.23%), Postives = 266/413 (64.41%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNYSTKNVGHPYQQXXXXXXP---YLETAALVKPGGGGEGTGTGGAMNPRGDILSPVFNRSGAVYRSSPATAXXXXXXXXXTSVLPESSPLRWRTPRQARSQSLREHTSTSSQXXXXXXXXXXXXPSPLAQSLGRTRSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKFSVSARETTGYGAMEEGGXXXXXXXXXXXXXXXXXAGVRVRRPRGASLGEEPRVGEGAVQAYMSLWANGGGGSLVDSPGLTGMTGGGGDSSPGFSGRMGRSSSVVSLLPASEERTRRVILDFSNVV 1269
            +QVP VM  RVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAV+ILSDVKD IVWGTD P  PNAGAPATGIFGNVYDDSN+ST++VGHP   XXXXXX    YL+ AA VKP G  EGT   GAM+P GDILSPVFNRSGAVYRSS ATA         +SVLP  SP+                 STSSQ             SPLAQSL RTRSAG T                                                           A FSV  RETTGYGAMEEGG   XXXXXXXXXXXX  AGVRVRR RGASLGEEPRVGEGAVQ YMS WANGGG S VD PGLTG TGGG DSSP FSGR  RS SV SLLPASEERTRRVILDFSNVV
Sbjct:  449 AQVPAVMKTRVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVQILSDVKDGIVWGTDLPATPNAGAPATGIFGNVYDDSNHSTRSVGHPXXXXXXXXXXXXTYLKAAAHVKPSG--EGTTAVGAMSPCGDILSPVFNRSGAVYRSSSATAAVAAP----SSVLPGPSPM-----------------STSSQQQGGASPQGRS--SPLAQSLARTRSAGGTTTTTSTGVYGADGGRGRLFHRAGGLLPGASEHQQAEQEPLAVLANASSRHDGGSGG---ANFSVPTRETTGYGAMEEGGAGGXXXXXXXXXXXXT-AGVRVRRLRGASLGEEPRVGEGAVQEYMSPWANGGG-SFVDCPGLTGRTGGG-DSSPSFSGRGARSPSVASLLPASEERTRRVILDFSNVV 830          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: D7FMW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW9_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 5.230e-58
Identity = 195/410 (47.56%), Postives = 198/410 (48.29%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNYSTKNVGHPYQQXXXXXXPYLETAALVKPGGGGEGTGTGGAMNPRGDILSPVFNRSGAVYRSSPATAXXXXXXXXXTSVLPESSPLRWRTPRQARSQSLREHTSTSSQXXXXXXXXXXXXPSPLAQSLGRTRSAGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKFSVSARETTGYGAMEEGGXXXXXXXXXXXXXXXXXAGVRVRRPRGASLGEEPRVGEGAVQAYMSLWANGGGGSLVDSPGLTGMTGGGGDSSPGFSGRMGRSSSVVSLLPASEERTRRVILDFSNVV 1269
            +QVPTVM ARVKASTVMRTFEERVILKAHQEQ VVLELQ                                                                               GEGT   G +NPRGDILSPVFNRSGAVYRSS ATAXXXXXXXXX    P      W                 SSQ             SPLA SL RTRS G T                                                           A FSV A+ETT Y AMEEGG    XXXXXXXXXX    GVR RRPRGASLGEE RVGEGAVQ YMSLWANGGG S VDSPGLTG TGGG DSSPGFSGR  R  SVVSLLPASEERTRRVILDFSNVV
Sbjct:   41 AQVPTVMKARVKASTVMRTFEERVILKAHQEQAVVLELQP-----------------------------------------------------------------------------SGEGTTAAGVINPRGDILSPVFNRSGAVYRSSSATAXXXXXXXXXXXXXPM-----WTX--------XXXXGGASSQGIS----------SPLAHSLARTRSVGGTCTGVPGAGGGRGRPFHRAGGLLPGASERLEAEQESQAVLANDSTRHDGGRGG-------AHFSVPAQETTDYEAMEEGGAGGDXXXXXXXXXXAA-VGVRARRPRGASLGEEQRVGEGAVQEYMSLWANGGG-SFVDSPGLTGRTGGG-DSSPGFSGRETRCPSVVSLLPASEERTRRVILDFSNVV 340          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: A0A4D9DC98_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DC98_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.720e-9
Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNYSTKNVGH-----PYQQXXXXXXPYLETAALVKPGGGGEGTG 408
            ++ P V+  RV+ S+V+RTFEER IL A+ ++ + L L+GY+FFGSAVKIL+++K+ ++ G        +G P TG      ++   +  ++G      P         P+  T+A +   G GE TG
Sbjct:  459 AEAPVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVLAGHA------SGLPETG----EREEEEEAEADIGGEGGVGPDGAEAMGPLPFSSTSAAMLFRGSGERTG 576          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: W7TKR3_9STRA (Sulfate permease family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKR3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 9.510e-9
Identity = 30/61 (49.18%), Postives = 48/61 (78.69%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRIVWG 222
            ++ P V+  RV+ S+V+RTFEER IL A+ ++ + L L+GY+FFGSAVKIL+++K+ ++ G
Sbjct:  487 AEAPVVLHPRVRHSSVVRTFEERAILSANTDKIITLSLRGYVFFGSAVKILNEIKENVLAG 547          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: A0A7S3GZR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZR3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.790e-7
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLELQGYIFFGSAVKILSDVKDRI 213
            S + +V  A ++ STV+RTFEER  L AH+ + V + L+GYIFFGSAVKIL DVK  +
Sbjct:  451 SSLQSVSCASLQTSTVIRTFEERAALIAHRGKVVTITLKGYIFFGSAVKILEDVKSHV 508          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: A0A7R9UBE4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.670e-6
Identity = 52/155 (33.55%), Postives = 67/155 (43.23%), Query Frame = 1
Query:   40 SQVPTVMTARVKASTVMRTFEERVILKA--HQEQTVVLELQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNYSTKNVGHPYQQXXXXXXPYLETAALVKPGGGGEGTGTGGAMNPRGDILSPVFNRSGAVYRSSPATA 498
            +QVP V ++  + S + RTF+ERVIL    H     +  LQGYIFFGSAV +L+DVK RI W       P+ G  + GI            + V  P         P L T              T G     G    PV+NR G   + SP+ A
Sbjct:  434 AQVPGVKSSFRRTSLITRTFQERVILDTAMHDGIMQIFSLQGYIFFGSAVNLLADVKSRIRW-------PDGGPASLGI------------ERVDSPPTVPKVPSSPSLYTEP------------TDGKFATAGIAAMPVYNRGGG--KGSPSKA 555          
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Match: A0A7S1UB31_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB31_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 3.490e-6
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:   25 FFFFCSQVPTVMTARVKASTVMRTFEERVILK--AHQEQTVVLELQGYIFFGSAVKILSDVKDRI 213
            F F  +++PTV T   + S   RTF+ER+IL    H+ Q  + +LQGYIFFGSAV +L+DVK+R+
Sbjct:  429 FTFGYARLPTVKTNIKRNSLTTRTFQERIILDKATHEGQMQIFQLQGYIFFGSAVNLLADVKERV 493          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14608.3319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LSJ2_ECTSI6.280e-14366.01Sulfate_transp domain-containing protein n=1 Tax=E... [more]
D8LSJ4_ECTSI5.840e-14167.97Sulfate_transp domain-containing protein n=1 Tax=E... [more]
A0A6H5KE91_9PHAE1.880e-12965.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSJ0_ECTSI2.250e-10962.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FMW9_ECTSI5.230e-5847.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9DC98_9STRA7.720e-934.38Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TKR3_9STRA9.510e-949.18Sulfate permease family n=1 Tax=Nannochloropsis ga... [more]
A0A7S3GZR3_9STRA1.790e-755.17Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7R9UBE4_9STRA2.670e-633.55Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UB31_9STRA3.490e-649.23Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14608contigE-fasciculatus_F_contig14608:681..2890 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score444.1
Seed ortholog evalue7.3e-122
Seed eggNOG ortholog2880.D8LSJ2
KEGG koko:K03321
KEGG TC2.A.53.3
EggNOG free text desc.secondary active sulfate transmembrane transporter activity
EggNOG OGsCOG0659@1,KOG0236@2759
Ec32 ortholog descriptionSulphate transporter
Ec32 orthologEc-09_001860.2
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorysignal peptide
Exons3
Model size1284
Cds size1284
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14608.3319.1prot_E-fasciculatus_F_contig14608.3319.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14608 681..2890 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927947.6267157-CDS-E-fasciculatus_F_contig14608:680..8811622927947.6267157-CDS-E-fasciculatus_F_contig14608:680..881Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14608 681..881 -
1695995762.0481796-CDS-E-fasciculatus_F_contig14608:680..8811695995762.0481796-CDS-E-fasciculatus_F_contig14608:680..881Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14608 681..881 -
1622927947.642294-CDS-E-fasciculatus_F_contig14608:1171..20981622927947.642294-CDS-E-fasciculatus_F_contig14608:1171..2098Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14608 1172..2098 -
1695995762.062349-CDS-E-fasciculatus_F_contig14608:1171..20981695995762.062349-CDS-E-fasciculatus_F_contig14608:1171..2098Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14608 1172..2098 -
1622927947.6574645-CDS-E-fasciculatus_F_contig14608:2734..28901622927947.6574645-CDS-E-fasciculatus_F_contig14608:2734..2890Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14608 2735..2890 -
1695995762.0704842-CDS-E-fasciculatus_F_contig14608:2734..28901695995762.0704842-CDS-E-fasciculatus_F_contig14608:2734..2890Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14608 2735..2890 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14608.3319.1

>prot_E-fasciculatus_F_contig14608.3319.1 ID=prot_E-fasciculatus_F_contig14608.3319.1|Name=mRNA_E-fasciculatus_F_contig14608.3319.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=428bp
VIHAISFIFFFFCSQVPTVMTARVKASTVMRTFEERVILKAHQEQTVVLE
LQGYIFFGSAVKILSDVKDRIVWGTDPPPAPNAGAPATGIFGNVYDDSNY
STKNVGHPYQQQQQQQQPYLETAALVKPGGGGEGTGTGGAMNPRGDILSP
VFNRSGAVYRSSPATAAAAAAAAAATSVLPESSPLRWRTPRQARSQSLRE
HTSTSSQQQGGPSSSSQGRPSPLAQSLGRTRSAGATTTSAVAGGGGDGGR
PFHRAGGLLPGASEQQEAEQQQPPAVPANSSSSSSSSRRGGGSGGAKFSV
SARETTGYGAMEEGGAGGDGGASGSGGGAAAAAGVRVRRPRGASLGEEPR
VGEGAVQAYMSLWANGGGGSLVDSPGLTGMTGGGGDSSPGFSGRMGRSSS
VVSLLPASEERTRRVILDFSNVVRKKK*
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mRNA from alignment at E-fasciculatus_F_contig14608:681..2890-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14608.3319.1 ID=mRNA_E-fasciculatus_F_contig14608.3319.1|Name=mRNA_E-fasciculatus_F_contig14608.3319.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2210bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14608:681..2890- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCATTCACGCGATCTCTTTCATTTTTTTCTTTTTCTGTTCCCAGGTTCC CACGGTGATGACGGCGCGTGTGAAGGCGAGCACCGTCATGCGGACGTTCG AGGAGCGCGTGATCCTCAAGGCCCACCAGGAGCAGACGGTGGTCCTCGAG CTACAGGTACCACAAAAAGAAAAACTCGCGTTTTTTTCTTGTGTGAGACT GAGACACACTCTTGATGTCTGTTCCGCATGTAGCATGTGGTATGAGCCCG TCGCGTTCTTTGTTTGCACCACATTTTTTCTCGAAGCAAACAGAGGAGTT GGACCCTTCTCAGTTGCAGCTTACGCCGAAGGCTCGCAAAGTTTGACTGC CGACAGCGCCCCTCCCCTTTCCTTCCTTACTGTTTACCTTACTTTGTCCG GAGGGATGCTTCAAATTCACAACTTGCGAGGGGGCAAATCTGCTCTTTTC AAAGGCACATAGGCTTCTCTGTTTTCCTTTCTCTCGCGCTCTCTCTGTCG TAATTTACCTCCCCGTACCCGCTCCCCGCTCACTTCTATGCTTCCCAACG GCCCTTTTACTCTCTCCAATTCCTCTGGAATGTCGCTACTTTGGATATAA AGAACATCCGGGAATGCTGCGATTTGCATTGCAATATATTTTGAACTAGT TCTTGTAATTCTTCACGACGTAGAATACAACAAAATCTGTTTCACGTTTG ACTTCAACCAATACACCATTTTTTCCATCGATGCGCGCGGGGCCGCCTCT CACGGAAAAAACCACGTGCATAAAACACACACACACACACAGGGCTACAT ATTTTTCGGCTCCGCCGTCAAGATCCTGTCCGACGTCAAGGACCGCATCG TGTGGGGCACCGACCCACCCCCAGCCCCCAACGCCGGGGCCCCCGCCACC GGCATCTTCGGCAACGTCTACGACGACAGCAATTATTCCACCAAAAATGT CGGGCATCCGTACCAGCAGCAGCAGCAGCAGCAGCAGCCGTACCTTGAAA CCGCCGCACTAGTCAAGCCCGGCGGTGGCGGCGAAGGGACCGGTACTGGT GGTGCCATGAACCCCCGCGGAGATATCTTGAGCCCGGTGTTCAACAGGTC CGGAGCGGTGTACCGGTCATCGCCGGCAACGGCGGCGGCTGCTGCTGCTG CTGCTGCGGCCACGTCGGTACTGCCCGAGTCCTCCCCGCTGCGCTGGCGC ACCCCGCGGCAAGCTCGGAGTCAATCGTTGCGGGAACACACGTCGACGTC CTCACAGCAGCAGGGAGGCCCCTCTTCTTCCTCTCAAGGAAGACCGTCAC CCCTAGCTCAGTCGCTGGGGAGAACCAGGTCGGCCGGGGCAACGACGACG AGCGCCGTGGCCGGCGGCGGCGGCGACGGGGGTCGGCCCTTCCACAGAGC CGGCGGCCTGCTGCCAGGCGCGAGCGAGCAGCAGGAGGCGGAGCAGCAGC AGCCGCCGGCTGTGCCCGCGAATAGCAGCAGCAGCAGCAGCAGTAGCAGA CGTGGCGGTGGTAGCGGCGGGGCTAAATTCTCGGTCTCCGCAAGAGAGAC GACTGGCTACGGGGCGATGGAGGAAGGGGGAGCAGGTGGGGACGGGGGCG CGAGCGGCAGCGGCGGTGGAGCGGCGGCGGCGGCGGGGGTGCGCGTGCGA CGCCCGCGCGGGGCCAGCCTCGGCGAGGAACCGAGGGTCGGAGAGGGTGC CGTGCAAGCGTACATGTCGGTGAGAACTAGGGGGATCAGACATGAGACTG ACAGCCCGTTGTCAACCAAGGGGTTGTCGGTCTCGGAGGAAAAGGGGAGT ACGAGCACAGAAAGAGAGATATCGAACCAATAACCAAGAGACAAGTTGTC TTTTTGTAGGCAGAAGAGATCGTGGCATTCACTGCGTGTCGAGTGTGTAT TGGCATCCTACACTTGAAAGGATGTCGCCGTGTTGATCCACCGTCATCGA CCCCCCCATCTTCGGTGTCCCATCTCTCCCTCCCACGCTCGTGTGGCCCC GGGAAACAGCTCTGGGCAAACGGCGGCGGGGGGTCGCTTGTCGACAGCCC AGGCCTTACCGGCATGACGGGCGGCGGCGGCGACAGCAGCCCCGGGTTCT CCGGCCGCATGGGCCGCTCCTCCTCGGTGGTGTCTCTCCTACCGGCCTCC GAAGAGAGAACCCGGCGCGTCATCTTGGACTTCTCGAACGTTGTAAGAAA AAAAAAATAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14608:681..2890-

>mRNA_E-fasciculatus_F_contig14608.3319.1 ID=mRNA_E-fasciculatus_F_contig14608.3319.1|Name=mRNA_E-fasciculatus_F_contig14608.3319.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2568bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14608:681..2890- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCATTCACGCGATCTCTTTCATTTTTTTCTTTTTCTGTTCCCAGGTTCC
CACGGTGATGACGGCGCGTGTGAAGGCGAGCACCGTCATGCGGACGTTCG
AGGAGCGCGTGATCCTCAAGGCCCACCAGGAGCAGACGGTGGTCCTCGAG
CTACAGGTCATTCACGCGATCTCTTTCATTTTTTTCTTTTTCTGTTCCCA
GGTTCCCACGGTGATGACGGCGCGTGTGAAGGCGAGCACCGTCATGCGGA
CGTTCGAGGAGCGCGTGATCCTCAAGGCCCACCAGGAGCAGACGGTGGTC
CTCGAGCTACAGGGCTACATATTTTTCGGCTCCGCCGTCAAGATCCTGTC
CGACGTCAAGGACCGCATCGTGTGGGGCACCGACCCACCCCCAGCCCCCA
ACGCCGGGGCCCCCGCCACCGGCATCTTCGGCAACGTCTACGACGACAGC
AATTATTCCACCAAAAATGTCGGGCATCCGTACCAGCAGCAGCAGCAGCA
GCAGCAGCCGTACCTTGAAACCGCCGCACTAGTCAAGCCCGGCGGTGGCG
GCGAAGGGACCGGTACTGGTGGTGCCATGAACCCCCGCGGAGATATCTTG
AGCCCGGTGTTCAACAGGTCCGGAGCGGTGTACCGGTCATCGCCGGCAAC
GGCGGCGGCTGCTGCTGCTGCTGCTGCGGCCACGTCGGTACTGCCCGAGT
CCTCCCCGCTGCGCTGGCGCACCCCGCGGCAAGCTCGGAGTCAATCGTTG
CGGGAACACACGTCGACGTCCTCACAGCAGCAGGGAGGCCCCTCTTCTTC
CTCTCAAGGAAGACCGTCACCCCTAGCTCAGTCGCTGGGGAGAACCAGGT
CGGCCGGGGCAACGACGACGAGCGCCGTGGCCGGCGGCGGCGGCGACGGG
GGTCGGCCCTTCCACAGAGCCGGCGGCCTGCTGCCAGGCGCGAGCGAGCA
GCAGGAGGCGGAGCAGCAGCAGCCGCCGGCTGTGCCCGCGAATAGCAGCA
GCAGCAGCAGCAGTAGCAGACGTGGCGGTGGTAGCGGCGGGGCTAAATTC
TCGGTCTCCGCAAGAGAGACGACTGGCTACGGGGCGATGGAGGAAGGGGG
AGCAGGTGGGGACGGGGGCGCGAGCGGCAGCGGCGGTGGAGCGGCGGCGG
CGGCGGGGGTGCGCGTGCGACGCCCGCGCGGGGCCAGCCTCGGCGAGGAA
CCGAGGGTCGGAGAGGGTGCCGTGCAAGCGTACATGTCGGGCTACATATT
TTTCGGCTCCGCCGTCAAGATCCTGTCCGACGTCAAGGACCGCATCGTGT
GGGGCACCGACCCACCCCCAGCCCCCAACGCCGGGGCCCCCGCCACCGGC
ATCTTCGGCAACGTCTACGACGACAGCAATTATTCCACCAAAAATGTCGG
GCATCCGTACCAGCAGCAGCAGCAGCAGCAGCAGCCGTACCTTGAAACCG
CCGCACTAGTCAAGCCCGGCGGTGGCGGCGAAGGGACCGGTACTGGTGGT
GCCATGAACCCCCGCGGAGATATCTTGAGCCCGGTGTTCAACAGGTCCGG
AGCGGTGTACCGGTCATCGCCGGCAACGGCGGCGGCTGCTGCTGCTGCTG
CTGCGGCCACGTCGGTACTGCCCGAGTCCTCCCCGCTGCGCTGGCGCACC
CCGCGGCAAGCTCGGAGTCAATCGTTGCGGGAACACACGTCGACGTCCTC
ACAGCAGCAGGGAGGCCCCTCTTCTTCCTCTCAAGGAAGACCGTCACCCC
TAGCTCAGTCGCTGGGGAGAACCAGGTCGGCCGGGGCAACGACGACGAGC
GCCGTGGCCGGCGGCGGCGGCGACGGGGGTCGGCCCTTCCACAGAGCCGG
CGGCCTGCTGCCAGGCGCGAGCGAGCAGCAGGAGGCGGAGCAGCAGCAGC
CGCCGGCTGTGCCCGCGAATAGCAGCAGCAGCAGCAGCAGTAGCAGACGT
GGCGGTGGTAGCGGCGGGGCTAAATTCTCGGTCTCCGCAAGAGAGACGAC
TGGCTACGGGGCGATGGAGGAAGGGGGAGCAGGTGGGGACGGGGGCGCGA
GCGGCAGCGGCGGTGGAGCGGCGGCGGCGGCGGGGGTGCGCGTGCGACGC
CCGCGCGGGGCCAGCCTCGGCGAGGAACCGAGGGTCGGAGAGGGTGCCGT
GCAAGCGTACATGTCGCTCTGGGCAAACGGCGGCGGGGGGTCGCTTGTCG
ACAGCCCAGGCCTTACCGGCATGACGGGCGGCGGCGGCGACAGCAGCCCC
GGGTTCTCCGGCCGCATGGGCCGCTCCTCCTCGGTGGTGTCTCTCCTACC
GGCCTCCGAAGAGAGAACCCGGCGCGTCATCTTGGACTTCTCGAACGTTG
TAAGAAAAAAAAAATAACTCTGGGCAAACGGCGGCGGGGGGTCGCTTGTC
GACAGCCCAGGCCTTACCGGCATGACGGGCGGCGGCGGCGACAGCAGCCC
CGGGTTCTCCGGCCGCATGGGCCGCTCCTCCTCGGTGGTGTCTCTCCTAC
CGGCCTCCGAAGAGAGAACCCGGCGCGTCATCTTGGACTTCTCGAACGTT
GTAAGAAAAAAAAAATAA
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