mRNA_E-fasciculatus_F_contig145.3251.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: D7FPW5_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW5_ECTSI) HSP 1 Score: 222 bits (565), Expect = 3.520e-67 Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 1
Query: 7 EGGDEELSDELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
EG DEELSD+LKAALAMSMQAEDAGVEGAAGPGLPA+FKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE
Sbjct: 531 EGEDEELSDDLKAALAMSMQAEDAGVEGAAGPGLPADFKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 638
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: A0A7S3XWY9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWY9_HETAK) HSP 1 Score: 155 bits (393), Expect = 1.340e-46 Identity = 77/115 (66.96%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 7 EGGDEELSDELKAALAMSMQAEDA-GVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQEG------DDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
EG EE + L+AALA+SMQ A EGAAGPGLP +F+G YELF VVTHKGREADGGHYMGWV+QEG D W VFDD+DVS E++M LKGGGDWHMAYLTFYR+K
Sbjct: 39 EGAGEEEREALEAALALSMQPGAAVAAEGAAGPGLPGDFRGNYELFGVVTHKGREADGGHYMGWVKQEGGRGDPSDKWFVFDDADVSETTEEEVMKLKGGGDWHMAYLTFYRYKN 153
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: A0A7S0AW48_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AW48_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.280e-43 Identity = 76/127 (59.84%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 1 AVEGGDEELSDELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQE-----------------GDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
AV G D E + LKAALAMS++ E V GPGLP NF+G YELFAVVTHKGR+ADGGHYM WVR E DDW VFDD +VSPCKTED++ LKGGGDWHM+YL FYR K+
Sbjct: 38 AVAGDDAEEDEALKAALAMSVEEELTPV----GPGLPDNFQGQYELFAVVTHKGRDADGGHYMAWVRGEKPEGAPEAEKIGDSEDTNDDWYVFDDDEVSPCKTEDVLKLKGGGDWHMSYLNFYRCKK 160
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: K0TKS4_THAOC (USP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TKS4_THAOC) HSP 1 Score: 146 bits (369), Expect = 1.810e-42 Identity = 73/131 (55.73%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 4 VEGGDEELSDELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVR----------------------QEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
++G D+E +L+AALAMS++ E V GPGLP +F+G YELFAVVTHKGR+ADGGHYMGWV+ +E DDW VFDD +VSPCKTEDI+ LKGGGDWHM+YL FYR K+
Sbjct: 64 MDGADDEDDADLRAALAMSVEPELPPV----GPGLPPDFRGLYELFAVVTHKGRDADGGHYMGWVKADNSGRQAAGDDKKREKIGDTEEENDDWYVFDDDEVSPCKTEDILKLKGGGDWHMSYLNFYRAKK 190
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: W7TNR7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNR7_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.140e-42 Identity = 76/107 (71.03%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 13 GDEELSDELKAALAMSM-QAEDAGVEGA-AGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFK 327
G E L+AALAMSM + DA V A GPGLP +FKG YELF VVTHKGR ADGGHYMGWVRQ+GDDWLVFDD DVS CKT +++ L GGGDWHMAYL FYRFK
Sbjct: 406 GSSEEEAALQAALAMSMADSADAAVPPAPCGPGLPMDFKGLYELFGVVTHKGRTADGGHYMGWVRQKGDDWLVFDDEDVSECKTAEVLQLSGGGDWHMAYLCFYRFK 512
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: A0A6V2FVX1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2FVX1_9STRA) HSP 1 Score: 154 bits (388), Expect = 7.350e-42 Identity = 74/114 (64.91%), Postives = 85/114 (74.56%), Query Frame = 1
Query: 34 ELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQE---------------GDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
E+KAALAMS+Q E+ E A GPGLPANF+G YELFAVVTHKGR+ADGGHYMGWV+ E DDW VFDD +VSPCKTED++ LKGGGDWHM+YL FYR K+
Sbjct: 463 EMKAALAMSLQTEEETNE-AVGPGLPANFQGQYELFAVVTHKGRDADGGHYMGWVKAEKQNDDAQKIADTDEMNDDWFVFDDDEVSPCKTEDVLKLKGGGDWHMSYLNFYRAKK 575
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: A0A7S2DH50_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH50_9STRA) HSP 1 Score: 147 bits (372), Expect = 7.380e-42 Identity = 71/110 (64.55%), Postives = 86/110 (78.18%), Query Frame = 1
Query: 16 DEELSDELKAALAMSMQAEDAGVEGAA-----GPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
+E+ ++LKAALA+S A + + G GL +F+G YELFA+VTHKGR ADGGHY+GWVRQEGDDWLVFDD+DVSPCKTED++ LKGGGD+HMAYLTFYR K
Sbjct: 170 EEDEDEDLKAALALSTAMNTADSQPVSNKDRVGYGLDPDFQGNYELFALVTHKGRLADGGHYIGWVRQEGDDWLVFDDADVSPCKTEDVLPLKGGGDYHMAYLTFYRSKN 279
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: M4BKS8_HYAAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BKS8_HYAAE) HSP 1 Score: 151 bits (382), Expect = 1.990e-41 Identity = 69/104 (66.35%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 19 EELSDELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
+E D L+AA A+SM A+ G+E LPANF+G YEL+A++THKGR AD GHYM WVR EGDDW +DD DVSPCKTEDIM LKGGGDWHMAYL FYR K+
Sbjct: 401 QEEKDALEAACALSMGAKSPGIE------LPANFQGNYELYAILTHKGRSADSGHYMAWVRHEGDDWYCYDDDDVSPCKTEDIMKLKGGGDWHMAYLAFYRAKK 498
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: A0A7S1TQP1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQP1_9STRA) HSP 1 Score: 150 bits (379), Expect = 4.970e-41 Identity = 75/108 (69.44%), Postives = 80/108 (74.07%), Query Frame = 1
Query: 7 EGGDEELS---DELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQEGDDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYR 321
E G EE+ DELKAA+AMSM DAG PGLP +FKG YELF VVTHKGREAD GHY+GWVRQEGD WLVFDD V TE I+NLKGGGDWHMAYL FYR
Sbjct: 382 EAGGEEMEVVDDELKAAMAMSMPPVDAG------PGLPDDFKGNYELFGVVTHKGREADAGHYIGWVRQEGDQWLVFDDDHVEEVNTEAILNLKGGGDWHMAYLAFYR 483
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Match: B7G630_PHATC (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G630_PHATC) HSP 1 Score: 150 bits (379), Expect = 5.510e-41 Identity = 66/106 (62.26%), Postives = 83/106 (78.30%), Query Frame = 1
Query: 22 ELSDELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVTHKGREADGGHYMGWVRQEG---DDWLVFDDSDVSPCKTEDIMNLKGGGDWHMAYLTFYRFKE 330
E ++L+AALAMS++ D + GPGLP NF+G YELFAV+THKGR+ADGGHYM WV+ + +DW VFDD +VSPCKTED++ LKGGGDWHM+YL FYR K+
Sbjct: 394 EADEDLQAALAMSLETTDGTAKTPIGPGLPENFQGQYELFAVITHKGRDADGGHYMAWVKADNPTNEDWFVFDDDEVSPCKTEDVLKLKGGGDWHMSYLNFYRAKK 499 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig145.3251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig145.3251.1 >prot_E-fasciculatus_F_contig145.3251.1 ID=prot_E-fasciculatus_F_contig145.3251.1|Name=mRNA_E-fasciculatus_F_contig145.3251.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=111bp AVEGGDEELSDELKAALAMSMQAEDAGVEGAAGPGLPANFKGTYELFAVVback to top mRNA from alignment at E-fasciculatus_F_contig145:72..1061+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig145.3251.1 ID=mRNA_E-fasciculatus_F_contig145.3251.1|Name=mRNA_E-fasciculatus_F_contig145.3251.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=990bp|location=Sequence derived from alignment at E-fasciculatus_F_contig145:72..1061+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig145:72..1061+ >mRNA_E-fasciculatus_F_contig145.3251.1 ID=mRNA_E-fasciculatus_F_contig145.3251.1|Name=mRNA_E-fasciculatus_F_contig145.3251.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=666bp|location=Sequence derived from alignment at E-fasciculatus_F_contig145:72..1061+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |