prot_E-fasciculatus_F_contig14499.3250.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14499.3250.1
Unique Nameprot_E-fasciculatus_F_contig14499.3250.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length42
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14499.3250.1 vs. uniprot
Match: A0A6H5KE21_9PHAE (E2F_TDP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE21_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.760e-8
Identity = 27/35 (77.14%), Postives = 27/35 (77.14%), Query Frame = 0 
Query:    1 MPQGERRYQIYLKSPLGPIDVYVVSQVGTHTAATP 35
            MPQGERRYQIYLKSP GPIDVYVVSQV       P
Sbjct:  201 MPQGERRYQIYLKSPSGPIDVYVVSQVDERIEPGP 235
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BLAST of mRNA_E-fasciculatus_F_contig14499.3250.1 vs. uniprot
Match: D8LEV2_ECTSI (Transcription factor E2F n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV2_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 2.270e-7
Identity = 26/35 (74.29%), Postives = 26/35 (74.29%), Query Frame = 0 
Query:    1 MPQGERRYQIYLKSPLGPIDVYVVSQVGTHTAATP 35
            MP GERRYQIYLKSP GPIDVYVVSQV       P
Sbjct:  223 MPHGERRYQIYLKSPSGPIDVYVVSQVDERIEPGP 257
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14499.3250.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KE21_9PHAE4.760e-877.14E2F_TDP domain-containing protein n=1 Tax=Ectocarp... [more]
D8LEV2_ECTSI2.270e-774.29Transcription factor E2F n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14499contigE-fasciculatus_F_contig14499:3103..3228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14499.3250.1mRNA_E-fasciculatus_F_contig14499.3250.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14499 3103..3258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14499.3250.1 ID=prot_E-fasciculatus_F_contig14499.3250.1|Name=mRNA_E-fasciculatus_F_contig14499.3250.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=42bp
MPQGERRYQIYLKSPLGPIDVYVVSQVGTHTAATPASCMVE*
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