mRNA_E-fasciculatus_F_contig10012.32.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: D7FUN0_ECTSI (Anamorsin homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN0_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 4.780e-142 Identity = 244/281 (86.83%), Postives = 251/281 (89.32%), Query Frame = 1 Query: 169 MEVEEPPLSLAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQARGVVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNG-SXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
MEV+EPPLS APAPAGSKALVVCRR SEEASSAQQWASRSRSDG +VSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQ VVKLLKAGG +NVAASSQGGEAAAAALKRALTFAGFL VAANPED VLSGERAAWETGASAPVRLSFGASKN SRNGTNGNG + XXXXXX +KTWKLA+D XXXXX LIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEM+GG AAGPLPVVSVGD VDDALTSACGNCSK
Sbjct: 1 MEVDEPPLSFAPAPAGSKALVVCRRDSEEASSAQQWASRSRSDGTSVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQ---VVKLLKAGGNINVAASSQGGEAAAAALKRALTFAGFLNVAANPEDPRVLSGERAAWETGASAPVRLSFGASKNDSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGD-VDDALTSACGNCSK 277
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A6H5KDK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK2_9PHAE) HSP 1 Score: 133 bits (335), Expect = 1.750e-34 Identity = 101/136 (74.26%), Postives = 102/136 (75.00%), Query Frame = 1 Query: 424 VVKLLKAGGKVNVAASSQGGE-AAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXD-LIDEDALLESSAPVKRASET 825
VVKLLKAGG VNVAAS +GGE AAAAALKRALTFAGF D VLS ERAAWETGASAPVRLSFGASKNGSRNGTNGNG XXXXXXX XXXXX LIDEDALLESSAPVKRASET
Sbjct: 4 VVKLLKAGGNVNVAASPEGGEVAAAAALKRALTFAGFXXXXXXXXDPRVLSAERAAWETGASAPVRLSFGASKNGSRNGTNGNGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDEDALLESSAPVKRASET 139
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: W7TKP2_9STRA (Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKP2_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.340e-13 Identity = 66/185 (35.68%), Postives = 83/185 (44.86%), Query Frame = 1 Query: 478 GGEAAAAALKRALTFAGFLKVAANP---EDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPV-----KRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
G E A +K L AGF+ V P S L + WE GA+A V L G + TW+L DGE G +LID D+LLE + + KRA G GC TK+RACK+CSCGRAE E G LPV+S ++ +A S+CGNC K
Sbjct: 97 GKEETCAGMKMQLLLAGFVDVEVLPASASSSASLIAHKPQWEVGAAASVSLPVSLPXXXXXXXXXXTGQS-------AATWRLTDVDGEGGEEGGAEGELIDPDSLLEDAEVMAGLAAKRAEREQGQGCETKKRACKNCSCGRAEQEEGRGGVA--------LPVMS--EEELEASVSSCGNCYK 264
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A836CCA2_9STRA (Anamorsin homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.060e-13 Identity = 91/281 (32.38%), Postives = 130/281 (46.26%), Query Frame = 1 Query: 196 LAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAG---EGAVLGQARGVVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXP----SKTWKLAMDDGEEGAGXXXXXDLIDEDALLE--SSAPVKRASETAGDG-CATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
LAP AG KA+VV S + +W S + S + V P A A +++++E+ + A+LG+A G L +GG++ V S G E+ + L +GF+ PE + + AWE GASA ++ A GNG+ + WK+A++D E L+DEDALLE P+KRA+ A G C+TK+RACK+CSCGRAE+E G A P P D +SACGNC +
Sbjct: 11 LAPLTAGHKAIVVSE--SADGGKLSEWCSNNDS---SFVVSP------QAAAGVKNVNSVIIEDPLLLLDDALLGRALGA---LASGGRLLVLGS--GSES----VSSKLVLSGFVDARVTPEG---VEAFKPAWEAGASAQLKFKPKA----------GNGAVSKPQQQQKAAVATAWKVALNDLAEDDFAESDGGLVDEDALLEVAGDVPLKRATPAADAGDCSTKKRACKNCSCGRAELEAAG--------APAPPPE-------DGPGSSACGNCYR 243
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: DRE2_MONBE (Anamorsin homolog n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=DRE2_MONBE) HSP 1 Score: 59.3 bits (142), Expect = 2.130e-6 Identity = 53/171 (30.99%), Postives = 75/171 (43.86%), Query Frame = 1 Query: 499 ALKRALTFAGFLKV-AANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXD-LID-EDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
AL+ ALT GF+ V + E + ++ +E GA+AP++LSF K ++ W +A DD ++ D L+D ED L ++AP E G KRRACK+C+CGRA+ E GPLP S+CGNC
Sbjct: 103 ALRSALTMGGFVNVQVSTSEHALEAHADKPVYEVGAAAPLKLSFAKKKQS---------GAAAPAAQVAEVWTIATDDFDDDDLLENDGDELLDAEDLALATTAPEGDDCEVGAGG---KRRACKNCTCGRADAEAE---QAAKPTLTGPLPA------------SSCGNC 246
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: L1JNK9_GUITC (Anamorsin homolog n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNK9_GUITC) HSP 1 Score: 58.9 bits (141), Expect = 2.430e-6 Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 1 Query: 514 LTFAGFLKVAANPEDSCVL--SGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATK--RRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
L FAGF+ N D ++ S + WE G++ P LS SK ++ K WK++ D+ +E ++DED+LL S +K A + A D C R+ACK+C+CGRAEME NGG AA P + G+ + + C C
Sbjct: 98 LIFAGFVDTTENDGDGVMVETSAIKPPWEVGSAVP--LSIKRSKQEAQE--------------TKKVWKVSADEDDE---------IMDEDSLL-SEKDLKAAPKPASD-CELSGGRKACKNCTCGRAEMEENGGK------AAAAAPTSACGNRLGCDFENCCAQC 231
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: D8R8D5_SELML (Anamorsin homolog n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R8D5_SELML) HSP 1 Score: 58.9 bits (141), Expect = 3.030e-6 Identity = 64/213 (30.05%), Postives = 92/213 (43.19%), Query Frame = 1 Query: 424 VVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAA----------------NPEDSCVLSGERAAWETGASAPV-RLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATK---RRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
V ++LK GG + V S AA++R+L AGF+ + + DS +L ++ AWE G S P+ R + A NGS +WKL D +E DL+DED+LL + +KR A D C R+ACK+C+CGRAE+E G LP D++ + S CG+C
Sbjct: 75 VSRVLKPGGILVVRTSED-----KAAVQRSLVLAGFVSIETMEPVEGLSLADGLSGISLSDSVLLRAQKPAWEAGVSFPIKRKAVAAQDTAVERAVTSNGSSAIA------SWKLPTVDLDED-----DFDLVDEDSLL-TEEDLKRPELPAADDCEVGNAGRKACKNCTCGRAELEEEG-----------KLP-----DELLNNPISQCGSC 254
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A836GQ73_9TRYP (CIAPIN1 domain-containing protein n=1 Tax=Leishmania martiniquensis TaxID=1580590 RepID=A0A836GQ73_9TRYP) HSP 1 Score: 55.8 bits (133), Expect = 3.270e-6 Identity = 37/82 (45.12%), Postives = 44/82 (53.66%), Query Frame = 1 Query: 766 LIDEDALL-ESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
+ DEDALL E VKRA T G+ C T+RRACK+C CGRAE+E A G LP + + CGNCSK
Sbjct: 20 VADEDALLTEEDRVVKRA--TKGEDCTTRRRACKNCVCGRAELERK-------LDAEGKLPPEGI-----EMPPGGCGNCSK 87
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A024GTM7_9STRA (Anamorsin homolog n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GTM7_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 6.830e-6 Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1 Query: 703 KTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASET-AGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
K WKL EEG + IDED+LL+++ V++A++ G KRRACK+C+CGRAE E+ A+GP+ V D + S+CGNC K
Sbjct: 167 KKWKLT----EEG------DEFIDEDSLLDNTEEVRKAAKNDCGVSANGKRRACKNCTCGRAETEI----------ASGPV----VSDQELSQMVSSCGNCFK 245
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A087SQ00_AUXPR (Anamorsin homolog n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQ00_AUXPR) HSP 1 Score: 55.8 bits (133), Expect = 1.210e-5 Identity = 53/173 (30.64%), Postives = 78/173 (45.09%), Query Frame = 1 Query: 487 AAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCS 1005
A+ A L++ LT AG +A P DS V S + AWETGA A + L + WKL++DD ++ D+ID++ LL + V+ A AG G A + ACK+C+CGRAE A P+ + + + TS CG+C+
Sbjct: 28 ASPAGLQKNLTLAGLGTASAGPLDSVVSS--KPAWETGARAAISL-----------------RKKPAAVQAAPAWKLSVDDEDD--------DIIDDEQLLTAEDLVRPAPAAAGCGPAASK-ACKNCTCGRAE-------------ATEPVKLTKA---MLEKPTSGCGSCA 156 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 16 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10012.32.1 >prot_E-fasciculatus_F_contig10012.32.1 ID=prot_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp MSSSRKPALLATVVALGLITAAVCYNKQAARRRSSTGDADTAAAAAAAAAback to top mRNA from alignment at E-fasciculatus_F_contig10012:873..4417+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10012.32.1 ID=mRNA_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3545bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10012:873..4417+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10012:873..4417+ >mRNA_E-fasciculatus_F_contig10012.32.1 ID=mRNA_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10012:873..4417+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |