mRNA_E-fasciculatus_F_contig10012.32.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10012.32.1
Unique NamemRNA_E-fasciculatus_F_contig10012.32.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: D7FUN0_ECTSI (Anamorsin homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUN0_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 4.780e-142
Identity = 244/281 (86.83%), Postives = 251/281 (89.32%), Query Frame = 1 
Query:  169 MEVEEPPLSLAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQARGVVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNG-SXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            MEV+EPPLS APAPAGSKALVVCRR SEEASSAQQWASRSRSDG +VSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQ   VVKLLKAGG +NVAASSQGGEAAAAALKRALTFAGFL VAANPED  VLSGERAAWETGASAPVRLSFGASKN SRNGTNGNG + XXXXXX +KTWKLA+D       XXXXX LIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEM+GG       AAGPLPVVSVGD VDDALTSACGNCSK
Sbjct:    1 MEVDEPPLSFAPAPAGSKALVVCRRDSEEASSAQQWASRSRSDGTSVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQ---VVKLLKAGGNINVAASSQGGEAAAAALKRALTFAGFLNVAANPEDPRVLSGERAAWETGASAPVRLSFGASKNDSRNGTNGNGPAAXXXXXXXNKTWKLALDXXXXXXXXXXXXXLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMSGGVSNTNGGAAGPLPVVSVGD-VDDALTSACGNCSK 277
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A6H5KDK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDK2_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.750e-34
Identity = 101/136 (74.26%), Postives = 102/136 (75.00%), Query Frame = 1 
Query:  424 VVKLLKAGGKVNVAASSQGGE-AAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXD-LIDEDALLESSAPVKRASET 825
            VVKLLKAGG VNVAAS +GGE AAAAALKRALTFAGF        D  VLS ERAAWETGASAPVRLSFGASKNGSRNGTNGNG XXXXXXX                 XXXXX  LIDEDALLESSAPVKRASET
Sbjct:    4 VVKLLKAGGNVNVAASPEGGEVAAAAALKRALTFAGFXXXXXXXXDPRVLSAERAAWETGASAPVRLSFGASKNGSRNGTNGNGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIDEDALLESSAPVKRASET 139
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: W7TKP2_9STRA (Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKP2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.340e-13
Identity = 66/185 (35.68%), Postives = 83/185 (44.86%), Query Frame = 1 
Query:  478 GGEAAAAALKRALTFAGFLKVAANP---EDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPV-----KRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            G E   A +K  L  AGF+ V   P     S  L   +  WE GA+A V L                G         + TW+L   DGE G       +LID D+LLE +  +     KRA    G GC TK+RACK+CSCGRAE E   G           LPV+S  ++  +A  S+CGNC K
Sbjct:   97 GKEETCAGMKMQLLLAGFVDVEVLPASASSSASLIAHKPQWEVGAAASVSLPVSLPXXXXXXXXXXTGQS-------AATWRLTDVDGEGGEEGGAEGELIDPDSLLEDAEVMAGLAAKRAEREQGQGCETKKRACKNCSCGRAEQEEGRGGVA--------LPVMS--EEELEASVSSCGNCYK 264
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A836CCA2_9STRA (Anamorsin homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA2_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.060e-13
Identity = 91/281 (32.38%), Postives = 130/281 (46.26%), Query Frame = 1 
Query:  196 LAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDGATVSVCPPGHLESHARANAGAYDTIVVEEAG---EGAVLGQARGVVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXP----SKTWKLAMDDGEEGAGXXXXXDLIDEDALLE--SSAPVKRASETAGDG-CATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            LAP  AG KA+VV    S +     +W S + S   +  V P       A A     +++++E+     + A+LG+A G    L +GG++ V  S  G E+    +   L  +GF+     PE    +   + AWE GASA ++    A          GNG+            +  WK+A++D  E         L+DEDALLE     P+KRA+  A  G C+TK+RACK+CSCGRAE+E  G        A  P P        D   +SACGNC +
Sbjct:   11 LAPLTAGHKAIVVSE--SADGGKLSEWCSNNDS---SFVVSP------QAAAGVKNVNSVIIEDPLLLLDDALLGRALGA---LASGGRLLVLGS--GSES----VSSKLVLSGFVDARVTPEG---VEAFKPAWEAGASAQLKFKPKA----------GNGAVSKPQQQQKAAVATAWKVALNDLAEDDFAESDGGLVDEDALLEVAGDVPLKRATPAADAGDCSTKKRACKNCSCGRAELEAAG--------APAPPPE-------DGPGSSACGNCYR 243
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: DRE2_MONBE (Anamorsin homolog n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=DRE2_MONBE)

HSP 1 Score: 59.3 bits (142), Expect = 2.130e-6
Identity = 53/171 (30.99%), Postives = 75/171 (43.86%), Query Frame = 1 
Query:  499 ALKRALTFAGFLKV-AANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXD-LID-EDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
            AL+ ALT  GF+ V  +  E +     ++  +E GA+AP++LSF   K                    ++ W +A DD ++        D L+D ED  L ++AP     E    G   KRRACK+C+CGRA+ E             GPLP             S+CGNC
Sbjct:  103 ALRSALTMGGFVNVQVSTSEHALEAHADKPVYEVGAAAPLKLSFAKKKQS---------GAAAPAAQVAEVWTIATDDFDDDDLLENDGDELLDAEDLALATTAPEGDDCEVGAGG---KRRACKNCTCGRADAEAE---QAAKPTLTGPLPA------------SSCGNC 246
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: L1JNK9_GUITC (Anamorsin homolog n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JNK9_GUITC)

HSP 1 Score: 58.9 bits (141), Expect = 2.430e-6
Identity = 53/167 (31.74%), Postives = 77/167 (46.11%), Query Frame = 1 
Query:  514 LTFAGFLKVAANPEDSCVL--SGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATK--RRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
            L FAGF+    N  D  ++  S  +  WE G++ P  LS   SK  ++                 K WK++ D+ +E         ++DED+LL S   +K A + A D C     R+ACK+C+CGRAEME NGG       AA   P  + G+ +     + C  C
Sbjct:   98 LIFAGFVDTTENDGDGVMVETSAIKPPWEVGSAVP--LSIKRSKQEAQE--------------TKKVWKVSADEDDE---------IMDEDSLL-SEKDLKAAPKPASD-CELSGGRKACKNCTCGRAEMEENGGK------AAAAAPTSACGNRLGCDFENCCAQC 231
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: D8R8D5_SELML (Anamorsin homolog n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R8D5_SELML)

HSP 1 Score: 58.9 bits (141), Expect = 3.030e-6
Identity = 64/213 (30.05%), Postives = 92/213 (43.19%), Query Frame = 1 
Query:  424 VVKLLKAGGKVNVAASSQGGEAAAAALKRALTFAGFLKVAA----------------NPEDSCVLSGERAAWETGASAPV-RLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATK---RRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNC 1002
            V ++LK GG + V  S        AA++R+L  AGF+ +                  +  DS +L  ++ AWE G S P+ R +  A           NGS          +WKL   D +E        DL+DED+LL +   +KR    A D C      R+ACK+C+CGRAE+E  G            LP     D++ +   S CG+C
Sbjct:   75 VSRVLKPGGILVVRTSED-----KAAVQRSLVLAGFVSIETMEPVEGLSLADGLSGISLSDSVLLRAQKPAWEAGVSFPIKRKAVAAQDTAVERAVTSNGSSAIA------SWKLPTVDLDED-----DFDLVDEDSLL-TEEDLKRPELPAADDCEVGNAGRKACKNCTCGRAELEEEG-----------KLP-----DELLNNPISQCGSC 254
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A836GQ73_9TRYP (CIAPIN1 domain-containing protein n=1 Tax=Leishmania martiniquensis TaxID=1580590 RepID=A0A836GQ73_9TRYP)

HSP 1 Score: 55.8 bits (133), Expect = 3.270e-6
Identity = 37/82 (45.12%), Postives = 44/82 (53.66%), Query Frame = 1 
Query:  766 LIDEDALL-ESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            + DEDALL E    VKRA  T G+ C T+RRACK+C CGRAE+E           A G LP   +     +     CGNCSK
Sbjct:   20 VADEDALLTEEDRVVKRA--TKGEDCTTRRRACKNCVCGRAELERK-------LDAEGKLPPEGI-----EMPPGGCGNCSK 87
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A024GTM7_9STRA (Anamorsin homolog n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GTM7_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 6.830e-6
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 1 
Query:  703 KTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASET-AGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCSK 1008
            K WKL     EEG       + IDED+LL+++  V++A++   G     KRRACK+C+CGRAE E+          A+GP+    V D     + S+CGNC K
Sbjct:  167 KKWKLT----EEG------DEFIDEDSLLDNTEEVRKAAKNDCGVSANGKRRACKNCTCGRAETEI----------ASGPV----VSDQELSQMVSSCGNCFK 245
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BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Match: A0A087SQ00_AUXPR (Anamorsin homolog n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SQ00_AUXPR)

HSP 1 Score: 55.8 bits (133), Expect = 1.210e-5
Identity = 53/173 (30.64%), Postives = 78/173 (45.09%), Query Frame = 1 
Query:  487 AAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETGASAPVRLSFGASKNGSRNGTNGNGSXXXXXXXPSKTWKLAMDDGEEGAGXXXXXDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMNGGXXXXXXXAAGPLPVVSVGDDVDDALTSACGNCS 1005
            A+ A L++ LT AG    +A P DS V S  + AWETGA A + L                          +  WKL++DD ++        D+ID++ LL +   V+ A   AG G A  + ACK+C+CGRAE             A  P+ +      + +  TS CG+C+
Sbjct:   28 ASPAGLQKNLTLAGLGTASAGPLDSVVSS--KPAWETGARAAISL-----------------RKKPAAVQAAPAWKLSVDDEDD--------DIIDDEQLLTAEDLVRPAPAAAGCGPAASK-ACKNCTCGRAE-------------ATEPVKLTKA---MLEKPTSGCGSCA 156
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10012.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FUN0_ECTSI4.780e-14286.83Anamorsin homolog n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KDK2_9PHAE1.750e-3474.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TKP2_9STRA1.340e-1335.68Anamorsin homolog n=3 Tax=Monodopsidaceae TaxID=42... [more]
A0A836CCA2_9STRA2.060e-1332.38Anamorsin homolog n=1 Tax=Tribonema minus TaxID=30... [more]
DRE2_MONBE2.130e-630.99Anamorsin homolog n=1 Tax=Monosiga brevicollis Tax... [more]
L1JNK9_GUITC2.430e-631.74Anamorsin homolog n=1 Tax=Guillardia theta (strain... [more]
D8R8D5_SELML3.030e-630.05Anamorsin homolog n=2 Tax=Selaginella moellendorff... [more]
A0A836GQ73_9TRYP3.270e-645.12CIAPIN1 domain-containing protein n=1 Tax=Leishman... [more]
A0A024GTM7_9STRA6.830e-638.83Anamorsin homolog n=2 Tax=Albugo candida TaxID=653... [more]
A0A087SQ00_AUXPR1.210e-530.64Anamorsin homolog n=1 Tax=Auxenochlorella protothe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10012contigE-fasciculatus_F_contig10012:873..4417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.0
Seed ortholog evalue1.7e-113
Seed eggNOG ortholog2880.D7FUN0
Preferred nameDRE2
GOsGO:0000003,GO:0001505,GO:0002064,GO:0002065,GO:0002066,GO:0002376,GO:0002520,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005829,GO:0006091,GO:0006790,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0008150,GO:0008152,GO:0009055,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010941,GO:0016043,GO:0016226,GO:0016491,GO:0019222,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022900,GO:0030097,GO:0030154,GO:0030707,GO:0030855,GO:0031163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044572,GO:0044703,GO:0045019,GO:0045428,GO:0048037,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048609,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051704,GO:0055114,GO:0060429,GO:0060548,GO:0065007,GO:0065008,GO:0070013,GO:0071840,GO:0080134,GO:0080135,GO:1900407,GO:1900408,GO:1901031,GO:1901032,GO:1901298,GO:1901299,GO:1902882,GO:1902883,GO:1903201,GO:1903202,GO:1903205,GO:1903206,GO:1903426,GO:1903427,GO:1904406,GO:2000377,GO:2000378,GO:2001023,GO:2001024,GO:2001038,GO:2001039
EggNOG free text desc.metallo-sulfur cluster assembly
EggNOG OGsCOG5636@1,KOG4020@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionAnamorsin
Ec32 orthologEc-26_002090.1
Exons4
Model size1008
Cds size1008
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10012.32.1prot_E-fasciculatus_F_contig10012.32.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10012 873..4417 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927503.7320933-CDS-E-fasciculatus_F_contig10012:872..10551622927503.7320933-CDS-E-fasciculatus_F_contig10012:872..1055Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 873..1055 +
1695995566.6662104-CDS-E-fasciculatus_F_contig10012:872..10551695995566.6662104-CDS-E-fasciculatus_F_contig10012:872..1055Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 873..1055 +
1622927503.744471-CDS-E-fasciculatus_F_contig10012:2527..27671622927503.744471-CDS-E-fasciculatus_F_contig10012:2527..2767Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 2528..2767 +
1695995566.6784062-CDS-E-fasciculatus_F_contig10012:2527..27671695995566.6784062-CDS-E-fasciculatus_F_contig10012:2527..2767Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 2528..2767 +
1622927503.7589889-CDS-E-fasciculatus_F_contig10012:3046..34481622927503.7589889-CDS-E-fasciculatus_F_contig10012:3046..3448Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 3047..3448 +
1695995566.6982682-CDS-E-fasciculatus_F_contig10012:3046..34481695995566.6982682-CDS-E-fasciculatus_F_contig10012:3046..3448Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 3047..3448 +
1622927503.7738397-CDS-E-fasciculatus_F_contig10012:4234..44171622927503.7738397-CDS-E-fasciculatus_F_contig10012:4234..4417Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 4235..4417 +
1695995566.7074575-CDS-E-fasciculatus_F_contig10012:4234..44171695995566.7074575-CDS-E-fasciculatus_F_contig10012:4234..4417Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10012 4235..4417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10012.32.1

>prot_E-fasciculatus_F_contig10012.32.1 ID=prot_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp
MSSSRKPALLATVVALGLITAAVCYNKQAARRRSSTGDADTAAAAAAAAA
DEQRSVMEVEEPPLSLAPAPAGSKALVVCRRGSEEASSAQQWASRSRSDG
ATVSVCPPGHLESHARANAGAYDTIVVEEAGEGAVLGQARGVVKLLKAGG
KVNVAASSQGGEAAAAALKRALTFAGFLKVAANPEDSCVLSGERAAWETG
ASAPVRLSFGASKNGSRNGTNGNGSAAAAAAAPSKTWKLAMDDGEEGAGG
EEDDDLIDEDALLESSAPVKRASETAGDGCATKRRACKDCSCGRAEMEMN
GGGSNNNGGAAGPLPVVSVGDDVDDALTSACGNCSK
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mRNA from alignment at E-fasciculatus_F_contig10012:873..4417+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10012.32.1 ID=mRNA_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3545bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10012:873..4417+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCTCGTCTCGAAAGCCGGCTTTGTTGGCCACCGTGGTTGCCCTGGG
CCTCATCACCGCAGCGGTGTGCTACAACAAACAGGCCGCTCGCCGCCGGA
GCAGCACAGGCGACGCCGATACAGCAGCAGCAGCAGCAGCGGCAGCAGCG
GACGAGCAGAGATCAGTGATGGAGGTAGAGGAGGTGAGAAGAAAGTGCAG
AGTACATGGCAGTGGCGTCGAGTATTACTTCAATTCGAGCAAAATCGAAG
GGGCAACGAGGAGGGCCGGTGGATTGCGTTTGAACGTTTGAACCACAGAG
CCAGAGCCAGGTTTTGTGCGGAGGCTCTGCGGGCCGTTTCGAAAATCGAA
CCTTCCACCTTGCTTGTACGTAGAAATCCTATTGTATCCCACCAAGTGTG
TGGGCTGTGGGTATCGCCGGGTGTGCGTTACACACACAGCGGTGGGGGGG
GACCGAAGGTCTATTAGAGGCGCTCCCATGGGCGAAAGGGATCATACAGC
TCGCACTGGGTTGTATTTTCATGTACATTTGTATTTGAAATATATTACAC
TTAAGTACATCCGGTCCAAGGGTGTGTGTGCTGTCTTACACAACCTCCGG
TATACTACGTGCCCGGTTGGCGGGCACCGAAGTGGCGGCGGCCCCAATGC
TGCTACGGTCATATGCTAGCATGCAAGCAAGATCCTCGCTACCTTTCCCG
GCGCCAGAGCAACAGCATTCGCGTCAGGAAGTAATGGCGGCGGGGGCGGA
AGGGTTGGGAATCGATATGTACTGCTGGCTAGCAGCGGAGGGCCCGTTCG
GCCGGCGCCGCAGGCGCGGATTGCCCGCTGCGGCCGCTGCCCCGCGGGGC
AGCGGCGGGTGGACTTGCCGTGGGATTCGACCACGAGCACGGGCTAGGCA
TGGACGTTCTTTTTCCTGGACTCTGCCTTGTCTTTTGAGAGTTTTTTTGT
TGTTGGAGAAGGGAATATGCCAGAGTTTCAAGTAGCTTGGGGGGGATCTG
CAGCTGGGACTGTAGCGTTCCGTGCTGGAACTCGTTCCCGATGGGATGGG
CTCCCGACCATGCTGCTGGATGTTGCGACTCTCTTGGGTCGTTAAGACGA
TACGCTAAGAGATGAGTGATACCAGCTGACACAAACAGCAGTCTTGCTGA
GCCTGTCGAACAACAGAGGAGACATGGTGTCACTGCGGTGTGGACGTCTC
GCGAGGATCAAACAGAGAGACGCAAGCAGTCGTGCAGATACTACTGCTGT
ACGAATCCAACGCGACCCTATCCTCTGTAGGGTTATGTTTTTCCGGGAAT
ATGTTTGTATCCGTACCCGACGCTTGTGTGAGTGCTGTGACACTTCCGAA
ACCCTACCCGGAGATAATTTCCGAAAGAGAAAAAAAAAACGGGTTGTCAT
TGTTCTTGAGCCAGCGCAGTTGATATTCTTCGGCCATCTTTTTACAGTCT
CTGCAAACATTGTCCACACAAAACACGCACCACGGGAGACCCCACATCTC
CGAACACCGTTACATGCGTTGCCTGCTGTGCCGTCTCTGCTGCTGCGGCG
TTTCTTACCACACTTTACAAATATCATTTTTGTCCGCCATGACGCCCTCT
TCCCTCTGCCGGCGCTAAAACTGCGATACCCCCCCCCCCCCCCTGCCCGC
CGCAGCCGCCGCTGTCCCTCGCGCCGGCCCCGGCGGGCTCCAAGGCCCTC
GTGGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGTCGGCGCAGCAGTGGGC
GTCGCGATCCAGGAGCGATGGCGCGACCGTGAGCGTGTGCCCCCCGGGCC
ACCTGGAGTCGCACGCCCGGGCGAACGCGGGGGCGTACGACACGATCGTG
GTGGAGGAGGCCGGGGAAGGAGCCGTGCTTGGGCAGGCGAGAGGCGTTTT
GGGGGGGGCTGACCCGGGGGGGGCGGCTGTCAAGTGCTCGTTGAGTGGGG
AGGGGGGATGGGGGCAGGCTTATTGGATCTAAGGTGTTGTCGGCACTTCG
TTGTTATCCATGGGAAGTGTTTCGTGATGGAGAACTGCTGTGTTGCGATG
GATAAGAGAGGTATGTGTGTATCCCGCCTCTGCTGCTGCTGGACCACCGC
CCTTCCCGGCGTTGACTCCACAATAAACCCCCCCCCCTCTCCCCCCAATT
CATCAAAATTGACGGTGTTTTCAGGTCGTGAAGCTGCTCAAGGCCGGTGG
TAAGGTCAACGTGGCAGCCTCCTCTCAAGGCGGCGAAGCCGCCGCCGCCG
CCCTCAAACGCGCCCTCACCTTCGCGGGATTCCTTAAAGTCGCTGCCAAC
CCGGAAGACTCCTGTGTCCTTAGTGGGGAGCGGGCGGCGTGGGAGACGGG
AGCATCGGCGCCGGTTCGCCTCTCGTTCGGCGCGTCGAAGAACGGTTCGC
GGAACGGTACCAACGGGAACGGGTCAGCGGCGGCGGCGGCGGCGGCCCCG
AGCAAGACGTGGAAGCTGGCGATGGATGATGGAGAGGAAGGGGCTGGGGG
TGAGGAGGATGACGATCTTATCGACGAGGACGCTCTGCTGGAGAGCTCGG
CCCCCGTCAAGCGGGCGAGCGAAACGGTGAGGATACGGGGGGGGCAAGTA
TTTTTTTATCTACCGTGGCGAACGCGAACGCTCGGCCGTTGTAGATCAAG
TTGGCTGGCTTCTGTTCACCGCTGCGGATGTTGTTTGGTGCTACTTGGTT
GATATCCTGGCGGTCTACCCCACTCAAGAAATCCCCATGTGAAGAGGTTG
CATTCCTTAGGCGAGTTTATCTCACAAGCTTTGGTACAGGTGGCAAGTAA
TGCCTTGCGTCGGTCTCGCGAATACTGATTTCTTGGACCAGGTGAGAGCT
TGCGCCCACACTAAAATTCACCTGCTAGTAGGTTCTAGAGAGGGAGAGGT
TGGGATGTGTTTTCGGTTGGTTGTTTTGAGCTATTCTTGTCTTGCAGCTC
TTTGCTCATAGTGGTTGTCGCCATTTGAACACTTCCTTCCCTGGCCCCTG
AACTCTTATCCGTACATGCTCTATGTGCGTGCCTCTCCCGTATCGGCCGT
TTTGACATATCTTGGGGTTTAGCGTGTGGAATGCTCACGGTAGTCGGGTG
TGTATGCCGGCAGAGGTGTTGGTTGAGTATTTTTGAAAATAACATCAAAT
TTGTTTTTCAAGAGTAAAACTCTCTTGGCAAGAAATGAAATGAAAAGTGC
TTGGGTACTCAGAGTTGGCGCGGGCTGTCTCCACAAGTGTGTCGCCCGAG
CAGTTGTGGTGCGTAAGCAGCAGTGACCGCTGACGAACGTGGACAATCAG
AGCACGTCAATCGGTATTTACAACACCGTTTTACCGTCGTCCTCCGCATG
CATCCTTCACAGGCCGGCGACGGCTGCGCCACCAAGCGACGAGCGTGCAA
AGACTGCTCCTGCGGCCGTGCCGAGATGGAGATGAACGGGGGGGGCAGCA
ACAACAACGGCGGCGCCGCGGGGCCCCTGCCGGTGGTGTCCGTCGGGGAC
GACGTCGACGATGCCCTCACTTCCGCCTGCGGCAACTGCTCCAAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10012:873..4417+

>mRNA_E-fasciculatus_F_contig10012.32.1 ID=mRNA_E-fasciculatus_F_contig10012.32.1|Name=mRNA_E-fasciculatus_F_contig10012.32.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2016bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10012:873..4417+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGTCCTCGTCTCGAAAGCCGGCTTTGTTGGCCACCGTGGTTGCCCTGGG
CCTCATCACCGCAGCGGTGTGCTACAACAAACAGGCCGCTCGCCGCCGGA
GCAGCACAGGCGACGCCGATACAGCAGCAGCAGCAGCAGCGGCAGCAGCG
GACGAGCAGAGATCAGTGATGGAGGTAGAGGAGATGTCCTCGTCTCGAAA
GCCGGCTTTGTTGGCCACCGTGGTTGCCCTGGGCCTCATCACCGCAGCGG
TGTGCTACAACAAACAGGCCGCTCGCCGCCGGAGCAGCACAGGCGACGCC
GATACAGCAGCAGCAGCAGCAGCGGCAGCAGCGGACGAGCAGAGATCAGT
GATGGAGGTAGAGGAGCCGCCGCTGTCCCTCGCGCCGGCCCCGGCGGGCT
CCAAGGCCCTCGTGGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGTCGGCG
CAGCAGTGGGCGTCGCGATCCAGGAGCGATGGCGCGACCGTGAGCGTGTG
CCCCCCGGGCCACCTGGAGTCGCACGCCCGGGCGAACGCGGGGGCGTACG
ACACGATCGTGGTGGAGGAGGCCGGGGAAGGAGCCGTGCTTGGGCAGGCG
AGAGGCCCGCCGCTGTCCCTCGCGCCGGCCCCGGCGGGCTCCAAGGCCCT
CGTGGTCTGCAGAAGGGGTTCCGAGGAGGCGTCGTCGGCGCAGCAGTGGG
CGTCGCGATCCAGGAGCGATGGCGCGACCGTGAGCGTGTGCCCCCCGGGC
CACCTGGAGTCGCACGCCCGGGCGAACGCGGGGGCGTACGACACGATCGT
GGTGGAGGAGGCCGGGGAAGGAGCCGTGCTTGGGCAGGCGAGAGGCGTCG
TGAAGCTGCTCAAGGCCGGTGGTAAGGTCAACGTGGCAGCCTCCTCTCAA
GGCGGCGAAGCCGCCGCCGCCGCCCTCAAACGCGCCCTCACCTTCGCGGG
ATTCCTTAAAGTCGCTGCCAACCCGGAAGACTCCTGTGTCCTTAGTGGGG
AGCGGGCGGCGTGGGAGACGGGAGCATCGGCGCCGGTTCGCCTCTCGTTC
GGCGCGTCGAAGAACGGTTCGCGGAACGGTACCAACGGGAACGGGTCAGC
GGCGGCGGCGGCGGCGGCCCCGAGCAAGACGTGGAAGCTGGCGATGGATG
ATGGAGAGGAAGGGGCTGGGGGTGAGGAGGATGACGATCTTATCGACGAG
GACGCTCTGCTGGAGAGCTCGGCCCCCGTCAAGCGGGCGAGCGAAACGGT
CGTGAAGCTGCTCAAGGCCGGTGGTAAGGTCAACGTGGCAGCCTCCTCTC
AAGGCGGCGAAGCCGCCGCCGCCGCCCTCAAACGCGCCCTCACCTTCGCG
GGATTCCTTAAAGTCGCTGCCAACCCGGAAGACTCCTGTGTCCTTAGTGG
GGAGCGGGCGGCGTGGGAGACGGGAGCATCGGCGCCGGTTCGCCTCTCGT
TCGGCGCGTCGAAGAACGGTTCGCGGAACGGTACCAACGGGAACGGGTCA
GCGGCGGCGGCGGCGGCGGCCCCGAGCAAGACGTGGAAGCTGGCGATGGA
TGATGGAGAGGAAGGGGCTGGGGGTGAGGAGGATGACGATCTTATCGACG
AGGACGCTCTGCTGGAGAGCTCGGCCCCCGTCAAGCGGGCGAGCGAAACG
GCCGGCGACGGCTGCGCCACCAAGCGACGAGCGTGCAAAGACTGCTCCTG
CGGCCGTGCCGAGATGGAGATGAACGGGGGGGGCAGCAACAACAACGGCG
GCGCCGCGGGGCCCCTGCCGGTGGTGTCCGTCGGGGACGACGTCGACGAT
GCCCTCACTTCCGCCTGCGGCAACTGCTCCAAGGCCGGCGACGGCTGCGC
CACCAAGCGACGAGCGTGCAAAGACTGCTCCTGCGGCCGTGCCGAGATGG
AGATGAACGGGGGGGGCAGCAACAACAACGGCGGCGCCGCGGGGCCCCTG
CCGGTGGTGTCCGTCGGGGACGACGTCGACGATGCCCTCACTTCCGCCTG
CGGCAACTGCTCCAAG
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