prot_E-fasciculatus_F_contig1430.3141.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1430.3141.1
Unique Nameprot_E-fasciculatus_F_contig1430.3141.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length166
Homology
BLAST of mRNA_E-fasciculatus_F_contig1430.3141.1 vs. uniprot
Match: A0A8B9BW33_9AVES (Abasic site processing protein HMCES n=1 Tax=Anser brachyrhynchus TaxID=132585 RepID=A0A8B9BW33_9AVES)

HSP 1 Score: 74.3 bits (181), Expect = 1.860e-12
Identity = 51/102 (50.00%), Postives = 60/102 (58.82%), Query Frame = 0
Query:   25 VLEGRSAVPRGAYRSLPQEGKVRDQGGRGRSRVPGRCARIPDRRGARARWQRRPRQQEGPDHPPPHSAGCPQRRGAQQAARRGDHRFRRRAPQHPRGFAPQE 126
            ++ GR+AVPRG       +G++R  GGR  + VPG  A +P  R   A  QR PRQQE   HP   +A  PQRRGAQQAA R DHR  RR  QHP   A QE
Sbjct:  357 LVAGRAAVPRGPRAPAAAQGELRGAGGRRGAGVPGGRAGVPLGRDPGAGGQRGPRQQEDAHHPAAPAARHPQRRGAQQAAGRRDHRAGRRPAQHPGRAAAQE 458          
BLAST of mRNA_E-fasciculatus_F_contig1430.3141.1 vs. uniprot
Match: Q4SU61_TETNG ((spotted green pufferfish) hypothetical protein n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4SU61_TETNG)

HSP 1 Score: 63.9 bits (154), Expect = 1.250e-9
Identity = 47/94 (50.00%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   33 PRGAYRSLPQEGKVRDQGGRGRSRVPGRCARIPDRRGARARWQRRPRQQEGPDHPPPHSAGCPQRRGAQQAARRGDHRFRRRAPQHPRGFAPQE 126
            P G    L ++G   ++G R R+ VPG  A +PD     A  QR PRQQE   HP   +AG  QRRGA+QAA R DHR  RRA QHP G A QE
Sbjct:   27 PVGRVHRLLRKGNYAERGRR-RAGVPGGRAGVPDGGDPGAGRQRCPRQQEDAHHPAAPAAGRAQRRGAEQAAGRSDHRPGRRAAQHPGGAAAQE 119          
BLAST of mRNA_E-fasciculatus_F_contig1430.3141.1 vs. uniprot
Match: H3C9X3_TETNG (Histone H2A n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3C9X3_TETNG)

HSP 1 Score: 58.9 bits (141), Expect = 7.530e-8
Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   75 QRRPRQQEGPDHPPPHSAGCPQRRGAQQAARRGDHRFRRRAPQHPRGFAPQE 126
            +RRPRQQE  DHP   +AG  QRRGA+QAA R DHR  RRA QHP G A QE
Sbjct:   68 ERRPRQQEDQDHPAAPAAGRAQRRGAEQAAGRSDHRPGRRAAQHPGGAATQE 119          
BLAST of mRNA_E-fasciculatus_F_contig1430.3141.1 vs. uniprot
Match: A0A7S2RB11_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB11_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.060e-7
Identity = 52/124 (41.94%), Postives = 59/124 (47.58%), Query Frame = 0
Query:    9 HVRKRKG----RTRKEEHLQVLEGRSAVPRGAYRSLPQEGKVRDQGGRGRSRVPGRCARIPDRRGARARWQRRPRQQEGPDHPPPHSAGCPQRRGAQQAARRGDHRFRRRAPQHPRGFAPQEVQ 128
            H RK +G    RT  ++ LQV +G   VPRGA+  LPQ  +VR     GRS VP R  R+P R   RAR QRRPRQQE P                           RR APQHP    PQE Q
Sbjct:    8 HWRKGQGQGWTRTIFKQVLQVGQGWPPVPRGAHGPLPQARQVRHPCRSGRSGVPRRRPRVPLRGDPRARRQRRPRQQEVPXXXXXXXXXXXXXXXXXXXXXXXXXCLRRCAPQHPHRAPPQEEQ 131          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1430.3141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A8B9BW33_9AVES1.860e-1250.00Abasic site processing protein HMCES n=1 Tax=Anser... [more]
Q4SU61_TETNG1.250e-950.00(spotted green pufferfish) hypothetical protein n=... [more]
H3C9X3_TETNG7.530e-865.38Histone H2A n=2 Tax=Tetraodon nigroviridis TaxID=9... [more]
A0A7S2RB11_9STRA7.060e-741.94Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1430contigE-fasciculatus_F_contig1430:5915..6688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1430.3141.1mRNA_E-fasciculatus_F_contig1430.3141.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1430 5915..6688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1430.3141.1 ID=prot_E-fasciculatus_F_contig1430.3141.1|Name=mRNA_E-fasciculatus_F_contig1430.3141.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=166bp
MSQFNLSKHVRKRKGRTRKEEHLQVLEGRSAVPRGAYRSLPQEGKVRDQG
GRGRSRVPGRCARIPDRRGARARWQRRPRQQEGPDHPPPHSAGCPQRRGA
QQAARRGDHRFRRRAPQHPRGFAPQEVQCRQGQGVGVCFAGLLILLPRPK
VQRMLIHHGISPRAS*
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