mRNA_E-fasciculatus_F_contig14277.3121.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5JLL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL0_9PHAE) HSP 1 Score: 115 bits (287), Expect = 8.070e-28 Identity = 64/93 (68.82%), Postives = 71/93 (76.34%), Query Frame = 3
Query: 3 CRCKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIEDTARPQPPVEIRPQPSPRVVNAFALFLASRKQQESHGAEQNDM 281
CRCKDRKCSLAC RSRCT R ASA VR GG RPTVGA QTGPI+ ARPQPP++ RPQPS RV NA ALF+AS K +ESH AEQ+D+
Sbjct: 265 CRCKDRKCSLACRCRSRCTLRRAASAPVRAGGRS-AFRPTVGASQTGPIDCVARPQPPIDTRPQPSLRVANAMALFIASIKPRESHAAEQSDV 356
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5JR25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR25_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.360e-27 Identity = 62/93 (66.67%), Postives = 71/93 (76.34%), Query Frame = 3
Query: 3 CRCKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIEDTARPQPPVEIRPQPSPRVVNAFALFLASRKQQESHGAEQNDM 281
CRCK++KCSLAC R+RCT R A+A VR GG SRPTVGA QT +E T+RPQPP+E RPQPS V NA ALF AS +QQESHGAEQND+
Sbjct: 358 CRCKNKKCSLACGCRNRCTLRRAAAAPVRAGGRS-ASRPTVGASQTRRVEGTSRPQPPIESRPQPSDSVANAMALFAASMRQQESHGAEQNDV 449
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5KZT5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZT5_9PHAE) HSP 1 Score: 109 bits (272), Expect = 3.730e-26 Identity = 63/90 (70.00%), Postives = 64/90 (71.11%), Query Frame = 3
Query: 9 CKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIEDTARPQPPVEIRPQPSPRVVNAFALFLASRKQQESHGAEQND 278
CKDRKCSLAC R CT R A A VR GG SRPTVGA QTGPIE AR QPPV+ RPQPS V NA LF AS KQQESHGAEQND
Sbjct: 275 CKDRKCSLACGCRGHCTLRRAAPAPVRAGGMS-ASRPTVGASQTGPIEGVARHQPPVDTRPQPSVLVSNAMTLFAASMKQQESHGAEQND 363
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 109 bits (273), Expect = 6.290e-26 Identity = 61/93 (65.59%), Postives = 69/93 (74.19%), Query Frame = 3
Query: 3 CRCKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIEDTARPQPPVEIRPQPSPRVVNAFALFLASRKQQESHGAEQNDM 281
CRCK++KCSLAC R+RCT RVA A VR G SRPTVGAPQT +E T RPQP +E RP+PS V NA ALF AS +QQESHGAEQND+
Sbjct: 870 CRCKNKKCSLACGCRNRCTLRRVAPAPVRAAGRS-ASRPTVGAPQTSRVEGTPRPQPHIESRPRPSYSVANAMALFAASMRQQESHGAEQNDV 961
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 109 bits (273), Expect = 6.410e-26 Identity = 61/93 (65.59%), Postives = 69/93 (74.19%), Query Frame = 3
Query: 3 CRCKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIEDTARPQPPVEIRPQPSPRVVNAFALFLASRKQQESHGAEQNDM 281
CRCK++KCSLAC R+RCT RVA A VR G SRPTVGAPQT +E T RPQP +E RP+PS V NA ALF AS +QQESHGAEQND+
Sbjct: 1889 CRCKNKKCSLACGCRNRCTLRRVAPAPVRAAGRS-ASRPTVGAPQTSRVEGTPRPQPHIESRPRPSYSVANAMALFAASMRQQESHGAEQNDV 1980
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5L5C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C8_9PHAE) HSP 1 Score: 104 bits (259), Expect = 7.020e-25 Identity = 58/93 (62.37%), Postives = 67/93 (72.04%), Query Frame = 3
Query: 3 CRCKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIEDTARPQPPVEIRPQPSPRVVNAFALFLASRKQQESHGAEQNDM 281
CRCK++KCSLAC +RCT R A A VR GG S PTVGA QT +E T+RPQPP+E RP+PS NA ALF AS +QQESHGAEQND+
Sbjct: 182 CRCKNKKCSLACGCSNRCTLRRAAPAPVRAGGRS-ASPPTVGASQTRRVEGTSRPQPPIESRPRPSYSAANAMALFAASMRQQESHGAEQNDV 273
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5K0U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0U7_9PHAE) HSP 1 Score: 106 bits (264), Expect = 9.220e-25 Identity = 61/92 (66.30%), Postives = 63/92 (68.48%), Query Frame = 3
Query: 3 CRCKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIEDTARPQPPVEIRPQPSPRVVNAFALFLASRKQQESHGAEQND 278
CRCKDRKCSLAC R CT A VR GG SRPTV A QTGPIE ARPQPP++ RPQPS NA ALF AS KQ ESHGAEQND
Sbjct: 400 CRCKDRKCSLACGCRGLCTLRWAVPAPVRAGGMS-ASRPTVDASQTGPIEGVARPQPPIDTRPQPSGLDANAMALFAASMKQHESHGAEQND 490
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5JJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH5_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 4.150e-18 Identity = 54/86 (62.79%), Postives = 58/86 (67.44%), Query Frame = 3
Query: 3 CRCKDRKCSLACD*RSRCTPCRVASASVRPGGGGPVSRPTVGAPQTGPIED----TARPQPPVEIRPQPSPRVVNAFALFLASRKQ 248
CRCKDRKCSLAC SRCT R A A VR GG SRPTVG QTGPIE ARPQ P++ RPQPS RV N+ AL +AS KQ
Sbjct: 497 CRCKDRKCSLACGRISRCTLRRAAPAHVRAGGRS-ASRPTVGTFQTGPIEGPIEGVARPQLPIDTRPQPSLRVANSIALLVASMKQ 581
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Match: A0A6H5JK56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK56_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.560e-17 Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 19 ESARSLATEEVVAPHVGWRRHPCDQGGGDLCPGLRWVLLKLGRSRIPPDPNHLS-RFDHSLPLVLSMPSHSFSPRGSSRNRME 264
ESARSL E VAP+VG RRHPC++GGG L P LRW+LLKLGRSR+ PDPNH S R +++ L ++ S RG+ ++ ME
Sbjct: 902 ESARSLVAAEAVAPYVGRRRHPCEEGGG-LRPSLRWLLLKLGRSRVSPDPNHPSLRVANAMALFIASMKQKES-RGAEQSDME 982 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14277.3121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14277.3121.1 >prot_E-fasciculatus_F_contig14277.3121.1 ID=prot_E-fasciculatus_F_contig14277.3121.1|Name=mRNA_E-fasciculatus_F_contig14277.3121.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=94bp GAGARTESARSLATEEVVAPHVGWRRHPCDQGGGDLCPGLRWVLLKLGRSback to top mRNA from alignment at E-fasciculatus_F_contig14277:1385..1666- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14277.3121.1 ID=mRNA_E-fasciculatus_F_contig14277.3121.1|Name=mRNA_E-fasciculatus_F_contig14277.3121.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=282bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14277:1385..1666- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14277:1385..1666- >mRNA_E-fasciculatus_F_contig14277.3121.1 ID=mRNA_E-fasciculatus_F_contig14277.3121.1|Name=mRNA_E-fasciculatus_F_contig14277.3121.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=564bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14277:1385..1666- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |