mRNA_E-fasciculatus_F_contig14272.3120.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: A0A6H5KG61_9PHAE (FA_desaturase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KG61_9PHAE) HSP 1 Score: 459 bits (1182), Expect = 3.380e-160 Identity = 219/228 (96.05%), Postives = 220/228 (96.49%), Query Frame = 1
Query: 1 FVAALFLATAFIPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPFYHNEMLW-WVG 681
FVA+LFL TA IPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWT ISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLP QLALLAYACHAVNTIPLTPLEF GFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSF SAWRLETDRLRDRNLPFYHNEMLW WV
Sbjct: 74 FVASLFLGTAVIPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWTAISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPAQLALLAYACHAVNTIPLTPLEFLGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFASAWRLETDRLRDRNLPFYHNEMLWYWVA 301
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: A0A836CE88_9STRA (Fatty acid desaturase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE88_9STRA) HSP 1 Score: 236 bits (602), Expect = 4.340e-70 Identity = 116/222 (52.25%), Postives = 147/222 (66.22%), Query Frame = 1
Query: 1 FVAALFLATAFIPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPFYHNEM 666
FV A F +A IPD G +P P + HL +P A KG+H GG W YWAF LP D +VGVDTFN A Y L ER+ FR+ + IF ++ALL ++ V T LT E G+ VSV VY GG GI ++HEL+H++ + E+ LGR + ++ YGHF VEHN GHH+ VAT EDPATARFGESF++FLPRCVV SF SA +E RLR LP++HNE+
Sbjct: 295 FVTAAFALSAAIPDPGTAPWPTYAHLCLPIIAAKGLHAGGAWACSLIYWAFVLLPVLDALVGVDTFNHARAVYATLAERRAFRVTTCIFPLVEVALLLWSFREVATRELTVAEAVGYSVSVGVYAGGFGILIAHELLHRNTKFERLLGRIIIALMCYGHFNVEHNHGHHRTVATPEDPATARFGESFWSFLPRCVVNSFRSAVTIENARLRAEGLPWHHNEV 516
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: A0A377GK50_9GAMM (Alkane 1-monooxygenase 2 n=3 Tax=Legionellaceae TaxID=444 RepID=A0A377GK50_9GAMM) HSP 1 Score: 180 bits (456), Expect = 9.890e-52 Identity = 90/205 (43.90%), Postives = 131/205 (63.90%), Query Frame = 1
Query: 67 FMHLAIPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPFYH-NEMLWWV 678
++ + +PF G + GG +T + F F +P+ D V VD N + +L + K+F+I +WI++P Q + YA + + +PLT LEF GF +S+ + TGGIGITL+HEL+HK++ ++Q L + + V + YGHF++EH RGHH VAT +DPAT+R GES Y FLPR +VGSF SA +E RL P+YH N WW+
Sbjct: 13 YLLVMLPFI---GFYFGGFYTFLPFIILFSMVPWMD-VWLVDPSNPDRTQEHILLKDKYFKILTWIYVPLQCCFVIYAAYLIVHVPLTALEFIGFSLSIGLLTGGIGITLAHELMHKNSMVDQLLSKILLVSVCYGHFFIEHVRGHHVHVATPKDPATSRLGESLYQFLPRTIVGSFRSALNIERMRLNRLGYPWYHLNNQFWWI 213
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: A0A378L8H5_9GAMM (Alkane monooxygenase n=1 Tax=Legionella steigerwaltii TaxID=460 RepID=A0A378L8H5_9GAMM) HSP 1 Score: 178 bits (452), Expect = 4.010e-51 Identity = 87/205 (42.44%), Postives = 131/205 (63.90%), Query Frame = 1
Query: 67 FMHLAIPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPFYH-NEMLWWV 678
++ + +PF G + G +T + F+ F +P D ++ VD N + +L + ++F++ +WI++P Q + ++ + V PLT EF GF +S+ + TGGIGITL+HEL+HK++R +Q LG+A+ V + YGHF++EH RGHH VAT +DPAT+R GES Y FLPR +VGSF SA +E RL + P YH N WW+
Sbjct: 13 YLLVLLPF---MGFYFGSFYTFLPFFVLFTMIPLMDVLI-VDQSNPDSTQENMLLKDQYFKLLTWIYVPLQYCFMIFSAYLVVHFPLTVTEFIGFSLSIGLLTGGIGITLAHELMHKNSRTDQILGKALLVSVCYGHFFIEHVRGHHVHVATPKDPATSRLGESLYHFLPRTIVGSFRSALHIERKRLSRQGYPRYHLNNQFWWI 213
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: UPI00042A423E (alkane 1-monooxygenase n=1 Tax=Hugenholtzia roseola TaxID=1002 RepID=UPI00042A423E) HSP 1 Score: 176 bits (447), Expect = 2.940e-50 Identity = 81/205 (39.51%), Postives = 130/205 (63.41%), Query Frame = 1
Query: 64 YFMHLAIPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPFYHNEMLWWV 678
+F+ +P F++ G + GG ++ ++ F +P D+++G DT N + K E+K++R ++I++ Q A+L +AC+ + PL GF + +A GGIGIT++HEL HK+ +IEQ+ + + + +SY HF++EHN+GHH VAT DPA++R E+ YAF R VVG + SAW++E DRL LPFY N+ML++
Sbjct: 10 FFLAFLLPLFSILGYYVGGAANWLTVFFVFVLIPLFDYLIGKDTQNVEKEQEKQFSEQKYYRFITFIWVYVQWAMLFWACYVIAFGTWQPLHLVGFTLGIACVMGGIGITVAHELGHKNTKIEQFYSQILLLSVSYMHFFIEHNKGHHVHVATPLDPASSRKDETVYAFWLRSVVGGYRSAWKIENDRLARAKLPFYRNQMLYYT 214
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: A0A7G4RHJ9_9GAMM (Alkane 1-monooxygenase n=1 Tax=Legionella sp. PC997 TaxID=2755562 RepID=A0A7G4RHJ9_9GAMM) HSP 1 Score: 174 bits (441), Expect = 1.850e-49 Identity = 83/205 (40.49%), Postives = 131/205 (63.90%), Query Frame = 1
Query: 67 FMHLAIPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPFYH-NEMLWWV 678
++ + +PF G + GG +T + F+ F +P+ D + +D N E +L + ++F++ +WI++P Q + A + + +PLT EF GF +S+ + TGGIGITL+HEL+HK+++++Q L + + V + YGHF++EH RGHH VAT +DPAT+R GES Y FLPR ++GSF SA +E RL+ P+YH WW+
Sbjct: 13 YLLVILPFI---GFYYGGFYTFLPFFILFTLVPWMDIWL-LDPSNPNPPEEHLLLKAQYFKLLTWIYVPLQCCFIILAAYLIAHVPLTAKEFIGFSLSIGLLTGGIGITLAHELMHKNSQVDQLLSKILLVSVCYGHFFIEHVRGHHVHVATSKDPATSRLGESLYQFLPRTIMGSFRSASNIERKRLKRLGYPWYHVKNQFWWI 213
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: S3UMY7_9LEPT (Putative alkane 1-monooxygenase n=4 Tax=Leptospira wolffii TaxID=409998 RepID=S3UMY7_9LEPT) HSP 1 Score: 174 bits (441), Expect = 3.080e-49 Identity = 85/189 (44.97%), Postives = 123/189 (65.08%), Query Frame = 1
Query: 64 YFMHLAIPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRL 630
+ + IP AV G + GGG+ +S F LP D +VG D N ++ E VL++ +FR ++ + Q AL+ +A V + L+ LE+ GFV+S+ + TGGIGIT++HEL HK+ +IEQW + + + + Y HF++EHNRGHH V+T EDPAT+R GESF++F PR V+GS SAW+LE RL
Sbjct: 9 FLIAFLIPLMAVAGYYLGGGFNFLSLAVVFGILPILDVLVGPDASNPKEEEVPVLQQEFYFRFLTYAWAWVQFALVVWALWEVQSHSLSTLEWVGFVLSIGINTGGIGITVAHELGHKNTKIEQWYSKFILMTVCYMHFFIEHNRGHHVNVSTHEDPATSRRGESFFSFYPRTVLGSLASAWKLEKKRL 197
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: A0A5F2B5P6_9LEPT (Alkane 1-monooxygenase n=7 Tax=Leptospira TaxID=171 RepID=A0A5F2B5P6_9LEPT) HSP 1 Score: 174 bits (440), Expect = 3.940e-49 Identity = 86/198 (43.43%), Postives = 126/198 (63.64%), Query Frame = 1
Query: 82 IPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRD--RNLPFYHNEML 669
+P FAV G + GG + ++F F LP D V+G D N + E L+ +FR ++++ Q L+ +A + V T L+ LE++GFV+++ + TGGIGIT++HEL HKS +IEQW + + + + Y HF++EHNRGHH V+T EDPA++R GESFY F PR V GS+ SAW+LE RL ++ NEM+
Sbjct: 15 VPAFAVLGYYLGGAYNFLTFAIVFGLLPILDVVIGADPSNPAEEEVPALQNEFYFRFLTYVWAWVQFGLVLWALYEVQTKNLSTLEWWGFVLAIGINTGGIGITVAHELGHKSKKIEQWYSKFILMTVCYMHFFIEHNRGHHVNVSTHEDPASSRKGESFYRFYPRTVFGSYFSAWKLEAKRLSKAGKSALSLENEMI 212
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: UPI001ABD0E37 (Alkane 1-monooxygenase n=2 Tax=Roseivirga sp. E12 TaxID=2819237 RepID=UPI001ABD0E37) HSP 1 Score: 173 bits (439), Expect = 4.690e-49 Identity = 81/201 (40.30%), Postives = 129/201 (64.18%), Query Frame = 1
Query: 82 IPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPF--YHNEMLWWV 678
IP A+ G + GG W ++ + F F+P AD+++G D N D + ++ E+ ++R+ ++I+ QL L + + + P+ GF++S ++ TGGIGIT++HEL HK +++E+ R + + + Y HFY+EHNRGHH VAT DPAT+R GE+FYAF R V+GS+ SAW+LE RL + + F ++NEM+W+
Sbjct: 15 IPLLAILGFYLGGYWNFMASVFVFVFIPLADWIIGKDPENMTDEKAILVSEQFYYRLITYIWTFFQLGFLMWGAFVIAESAMEPIFLIGFILSFSLVTGGIGITVAHELGHKKSKLERVYSRIILMTVCYMHFYIEHNRGHHVYVATPRDPATSRKGENFYAFWLRSVIGSYFSAWKLERSRLERKGIKFWSFYNEMIWYT 215
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Match: A0A7Y7BGN3_9BACT (Alkane 1-monooxygenase n=2 Tax=Cytophagia bacterium TaxID=2026730 RepID=A0A7Y7BGN3_9BACT) HSP 1 Score: 172 bits (437), Expect = 9.080e-49 Identity = 84/199 (42.21%), Postives = 127/199 (63.82%), Query Frame = 1
Query: 82 IPFFAVKGVHEGGGWTGISFYWAFFFLPFADFVVGVDTFNKRDAEYKVLRERKWFRIASWIFLPTQLALLAYACHAVNTIPLTPLEFFGFVVSVAVYTGGIGITLSHELVHKSNRIEQWLGRAMCVMISYGHFYVEHNRGHHKLVATDEDPATARFGESFYAFLPRCVVGSFGSAWRLETDRLRDRNLPF--YHNEMLW 672
IP + G + GG W ++ + F +P AD+++G D N + E ++ E+ ++R ++I+ Q+A L + + T+PLT E+ GFVVS A+ TGGIGIT++HEL HK +++E++ + + + + Y HFY+EHNRGHH VAT DPAT+R E+F F R V GS+ SAWRLE +RLR R L + N+M+W
Sbjct: 15 IPSLTILGFYLGGYWNYLTILFVFIIIPLADYLIGEDPENLSEDESMLIAEQFYYRFITFIWAFFQVAFLIWGVWMIATVPLTVTEWIGFVVSFALVTGGIGITVAHELGHKKSKLERFYAKLLLMTVCYMHFYIEHNRGHHVYVATPRDPATSRKNEAFPKFWVRSVFGSYFSAWRLEKERLRKRKLGIWSFDNQMIW 213 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14272.3120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14272.3120.1 >prot_E-fasciculatus_F_contig14272.3120.1 ID=prot_E-fasciculatus_F_contig14272.3120.1|Name=mRNA_E-fasciculatus_F_contig14272.3120.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=232bp FVAALFLATAFIPDSGDSPSPYFMHLAIPFFAVKGVHEGGGWTGISFYWAback to top mRNA from alignment at E-fasciculatus_F_contig14272:105..3084+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14272.3120.1 ID=mRNA_E-fasciculatus_F_contig14272.3120.1|Name=mRNA_E-fasciculatus_F_contig14272.3120.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2980bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14272:105..3084+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14272:105..3084+ >mRNA_E-fasciculatus_F_contig14272.3120.1 ID=mRNA_E-fasciculatus_F_contig14272.3120.1|Name=mRNA_E-fasciculatus_F_contig14272.3120.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1392bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14272:105..3084+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |