mRNA_E-fasciculatus_F_contig1425.3109.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: D8LUB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB0_ECTSI) HSP 1 Score: 265 bits (678), Expect = 4.290e-85 Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGSCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSMAEAAAAEDGNRLIHVASYEAWDA 361
CYNQCSGNGEC+PQG CDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLC+CHEGFTGRACERMSCPNDCN HGQCLSMAEAAAAEDGNRLIHVASYEAWDA
Sbjct: 28 CYNQCSGNGECDPQGFCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCICHEGFTGRACERMSCPNDCNGHGQCLSMAEAAAAEDGNRLIHVASYEAWDA 147
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: A0A7S3JZB7_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JZB7_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.380e-37 Identity = 69/130 (53.08%), Postives = 82/130 (63.08%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGSCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSMAEAAAAEDG---NRLIHV-------ASYEAWDA 361
C+ C+ NG CN +G CDC++G+ G DCSF CP AW+DIASG D+AH A CSN G CN +G+C C F G ACERM CPNDC+ G CLS+AEAAA DG NR +H SY WDA
Sbjct: 19 CHKNCNKNGLCNTEGRCDCFEGWKGADCSFRTCPQGRAWSDIASGEDEAHGYAECSNRGNCNTRSGMCECDTLFEGNACERMKCPNDCSEKGMCLSLAEAAATFDGYTLNRSMHRYQEYSLGVSYGVWDA 148
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: A0A7S1UCW7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCW7_9STRA) HSP 1 Score: 129 bits (325), Expect = 1.460e-32 Identity = 57/98 (58.16%), Postives = 67/98 (68.37%), Query Frame = 2
Query: 2 CYNQCSGNGEC-NPQGSCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSM 292
C N C+G+GEC N + C C+DGY G DCS CP+ AW D+A GTDDAHN+A CSNMG C+ TG C+C GFTG ACERM C + CN G C SM
Sbjct: 23 CPNMCNGHGECKNAERVCTCFDGYTGGDCSLRLCPTHEAWVDVAQGTDDAHNEAECSNMGICDTATGTCICRTGFTGAACERMECGSACNGRGTCESM 120
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: A0A482S5I4_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5I4_9ARCH) HSP 1 Score: 120 bits (302), Expect = 3.080e-32 Identity = 61/121 (50.41%), Postives = 71/121 (58.68%), Query Frame = 2
Query: 2 CYNQCSGNGECN-PQGSCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSMAEAAAAEDGNRLIHVASYEAWDA 361
C N CS +G C+ P C+C+DGY G DCS CP AWAD D+AH A CSN G C+ TGLCVC EGF G ACER SCPN+CN G+C SM+ A +D A WDA
Sbjct: 33 CPNACSKHGRCHSPSRQCECFDGYTGADCSLRICPFDRAWADKGIQDDNAHRPAECSNKGLCDRTTGLCVCQEGFEGIACERQSCPNNCNGVGECQSMSFYALTKDPGSGSVYAYNNVWDA 153
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: A0A0A7CMC0_9STRA (Secreted protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CMC0_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.390e-31 Identity = 63/120 (52.50%), Postives = 75/120 (62.50%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGSCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSMAEAAAAEDGNRLIHVASYEAWDA 361
C N CSG+G+C QG C C Y G DCS+++CP AWAD TD+AHN AVCSNMG C+ TGLC C GFTG AC+RMSC +CN+ G CLSM + A +D I WDA
Sbjct: 22 CPNDCSGHGQCLFQGVCQCSRSYYGADCSYIKCPMGNAWADYTLATDNAHNLAVCSNMGTCDATTGLCTCIPGFTGAACDRMSC--NCNSRGTCLSMNQYALTKDPGLGIINPYTTNWDA 139
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: A0A5D6XKJ3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKJ3_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.540e-31 Identity = 55/100 (55.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGS---CDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSM 292
C N CSG G C +G+ C C+ G+ G DCS CP+ PAW+D+A TD AH AVCSN G C+ +G C C GFTGRACERM+CPN+C+ HG C SM
Sbjct: 28 CPNACSGRGVCTSRGNGCICACFKGFIGDDCSLRTCPTGPAWSDVAVATDRAHQPAVCSNRGTCDASSGRCSCDAGFTGRACERMACPNECSKHGDCRSM 127
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: A0A1V9YUC9_9STRA (Tenascin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YUC9_9STRA) HSP 1 Score: 125 bits (315), Expect = 3.950e-31 Identity = 63/120 (52.50%), Postives = 75/120 (62.50%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGSCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSMAEAAAAEDGNRLIHVASYEAWDA 361
C N CSG+G+C QG C C Y G DCS+++CP AWAD TD+AHN AVCSNMG C+ TGLC C GFTG AC+RMSC +CN+ G CLSM + A +D I WDA
Sbjct: 336 CPNDCSGHGQCLFQGVCQCSRSYYGADCSYIKCPMGNAWADYTLATDNAHNLAVCSNMGTCDATTGLCTCIPGFTGAACDRMSC--NCNSRGTCLSMNQYALTKDPGLGIINPYTTNWDA 453
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: A0A6A3M2Y4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3M2Y4_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.620e-30 Identity = 57/122 (46.72%), Postives = 70/122 (57.38%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGS---CDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSMAEAAAAEDGNRLIHVASYEAWD 358
C N CS +G C +G+ C C++G+ G DCS CP+ PAW D+A TD AH CSN G C+ TG+C C GF+G AC RMSCPNDC HG+C SM A +D V WD
Sbjct: 21 CPNTCSDHGTCTTKGNGYLCSCYNGFTGGDCSRRTCPTGPAWNDLAIATDRAHQPVACSNRGTCDYTTGVCTCDVGFSGLACNRMSCPNDCGKHGECRSMKLNAQRKDKGLPPSVVYDSVWD 142
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: F0WWC6_9STRA (Mastigoneme putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWC6_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.010e-30 Identity = 56/121 (46.28%), Postives = 70/121 (57.85%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGSCDCWDGYDGWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSMAEAAAAEDGNRLIHVAS--YEAWD 358
C N+CSG+G C CDC + G DCS CP AW D A GT+DAH A C+N G CN + GLCVC +GFTG+ C R+ CP+DCN HG C + + A+ R+ V Y WD
Sbjct: 48 CPNKCSGHGRCKANDVCDCMQNWGGGDCSLRVCPYTRAWHDTAIGTNDAHYYAECANRGICNRDKGLCVCDDGFTGKGCRRLGCPDDCNGHGTCEYIEDLASDSFDKRVNGVPGQKYTLWD 168
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Match: F0YK13_AURAN (EGF-like domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK13_AURAN) HSP 1 Score: 115 bits (289), Expect = 3.590e-30 Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 2
Query: 2 CYNQCSGNGECNPQGSCDCWDGYD-GWDCSFLRCPSAPAWADIASGTDDAHNDAVCSNMGYCNGETGLCVCHEGFTGRACERMSCPNDCNAHGQCLSM 292
C N CSG+G+C + C C+DG+D DCS C AWAD A D AH+ A CSN G CN +TG C C +G+TG AC+R +CPNDCNA+G CL++
Sbjct: 13 CPNMCSGHGDCGAENVCSCFDGFDYAPDCSLRTCSKGIAWADKAYAVDLAHSMAECSNAGLCNRDTGKCECFDGYTGLACQRSACPNDCNANGMCLTL 110 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1425.3109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1425.3109.1 >prot_E-fasciculatus_F_contig1425.3109.1 ID=prot_E-fasciculatus_F_contig1425.3109.1|Name=mRNA_E-fasciculatus_F_contig1425.3109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=121bp MLQPVLRKRRVQPAGFLRLLGRLRRVGLFVLEVSVSPSLGGYSFWNRRRPback to top mRNA from alignment at E-fasciculatus_F_contig1425:6362..6979- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1425.3109.1 ID=mRNA_E-fasciculatus_F_contig1425.3109.1|Name=mRNA_E-fasciculatus_F_contig1425.3109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=618bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1425:6362..6979- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1425:6362..6979- >mRNA_E-fasciculatus_F_contig1425.3109.1 ID=mRNA_E-fasciculatus_F_contig1425.3109.1|Name=mRNA_E-fasciculatus_F_contig1425.3109.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=726bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1425:6362..6979- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |