mRNA_E-fasciculatus_F_contig14216.3082.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A6H5JW07_9PHAE (UTP15_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JW07_9PHAE) HSP 1 Score: 482 bits (1240), Expect = 1.830e-167 Identity = 238/252 (94.44%), Postives = 239/252 (94.84%), Query Frame = 1
Query: 4 VQTHNAPVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTVIDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
VQTHNAPVSC+HFSATAPHDFAVTCSTHVSLHAA TGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTVIDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISG TRQ K NVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV
Sbjct: 35 VQTHNAPVSCIHFSATAPHDFAVTCSTHVSLHAAVTGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTVIDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGSYDHTVKMWDTRQPKRNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 286
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A835Z7W5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W5_9STRA) HSP 1 Score: 254 bits (648), Expect = 3.100e-78 Identity = 131/254 (51.57%), Postives = 174/254 (68.50%), Query Frame = 1
Query: 4 VQTHNAPVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTVI--DVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
V+TH+A + +H+S AP+D AV+C +HVS+ + ATG ++R++ RF VAYS R DG+L+ GD G+VI D +K +LR F H A R VRWS DGL+LAS SDDK++RLWDLPT V +R+GH DYVRA+ AS +S D W++G R A G V + HGAPVEA L LPGG L SAGGN +K +WD +GGG +L+H ++HQKT+TCLAL+G+ +RLLTGGLD VKI +L ++V
Sbjct: 35 VETHDAHCTSLHYSPAAPYDLAVSCGSHVSIRSGATGAKLRAISRFQGVAYSGVFRGDGRLIAGGDAKGSVIVADATSKAMLRTFAGHAAAVRAVRWSADGLRLASASDDKSVRLWDLPTGAHVGMREGHTDYVRAMDASAASADAWVTGGYDGTVRLWDARAA-GAVRVMEHGAPVEAVLCLPGGSLVASAGGNVLK--IWDAMGGG--KLVHECSHHQKTITCLALNGSRTRLLTGGLDGLVKICSLSTYQV 283
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A1X2II15_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2II15_9FUNG) HSP 1 Score: 228 bits (582), Expect = 5.650e-68 Identity = 121/249 (48.59%), Postives = 164/249 (65.86%), Query Frame = 1
Query: 19 APVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
A + ++FS APHDFA+ ST V ++++ T + +++ RF +AYSA R DGKL+ GD TG V DV ++ ILR FREH P V ++S + + S SDDKT+R+WD+PT T+V V +GH DYVR+ S +P+ ++G RQ + V+ + HGAPVE+ L PGGG VSAGG +K VWDLL GG R LHTL+NHQKTVT LA + T +R+LTG LD+HVKIYN+E++KV
Sbjct: 38 ASIPSIYFSPVAPHDFALASSTRVQIYSSKTHQPKKTISRFKDLAYSACFRHDGKLLVAGDATGLVQLFDVNSRAILRTFREHSMPVHVTKFSNNKTNIMSASDDKTVRIWDIPTETSVNVFEGHDDYVRSGVVSDDNPNLVLTGAYDQTVKLWDMRQNE-CVMTIQHGAPVESLLMYPGGGAIVSAGGPTLK--VWDLLSGG--RCLHTLSNHQKTVTSLAFNNTATRILTGSLDQHVKIYNVEDYKV 281
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A1X2H797_SYNRA (WD40-repeat-containing domain protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H797_SYNRA) HSP 1 Score: 224 bits (571), Expect = 1.010e-66 Identity = 116/247 (46.96%), Postives = 159/247 (64.37%), Query Frame = 1
Query: 25 VSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
VS V+FS AP+DFA+ ST V ++++ T + +++ RF +AYSA R DGKL+ GD TG V DV ++ ILR FREH P RV ++S + Q+ + SDD+T+RLWD+P ++ V + H DYVRA S +P ++G TRQ G V+ + H APVE+ L PGGG VSAGG +K VWDLL GG R +H ++N QKTVT L D T SRL+TG LD+HVK+YN++++KV
Sbjct: 40 VSSVYFSPVAPYDFAIASSTRVQIYSSKTHQPKKTISRFKDIAYSASFRQDGKLVVAGDETGLVQVFDVNSRAILRTFREHTLPVRVTKFSSENTQIMTASDDRTVRLWDIPAEKSIHVFEDHQDYVRAGVVSQDNPHMLVTGSYDQTIKIWDTRQ-NGCVMTMQHDAPVESVLMYPGGGAVVSAGGPGIK--VWDLLSGG--RCMHAVSNQQKTVTSLCFDSTASRLVTGSLDQHVKVYNVQDYKV 281
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A5D6XGD7_9STRA (UTP15_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGD7_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.950e-65 Identity = 121/252 (48.02%), Postives = 156/252 (61.90%), Query Frame = 1
Query: 22 PVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNV----LELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
PV+ + S APH A+T ST + L++ AT ++ RF V YS RSDG+L+ G V +D+ T+ ILR F+ H A R R+S D + + S SDDKT R WDLPT V + H DYVR+ AASPSS W +G R A +V + L+HGAPVEA L +PGGGL +SAGGN VK VWD+L GG RLLH ++HQKT+T + LDGTGSRLLTG LD H+KIY+L+ ++V
Sbjct: 43 PVTHIDVSPVAPHAVAITTSTRIHLYSTATNEVTKTFSRFRDVVYSGTFRSDGRLLVAGGEAPVVQVLDIGTRAILRTFKGHTAAVRSTRFSSDNVHVLSCSDDKTARYWDLPTGKPVALLGAHKDYVRSSAASPSSQHIWATGSYDHTVKLWDLRAADQSVAASTMSLNHGAPVEATLIMPGGGLLMSAGGNVVK--VWDILSGG--RLLHAFSSHQKTITSIGLDGTGSRLLTGSLDGHLKIYDLKTYEV 290
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A484EDC8_BRELC (UTP15_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDC8_BRELC) HSP 1 Score: 220 bits (561), Expect = 2.400e-65 Identity = 113/252 (44.84%), Postives = 160/252 (63.49%), Query Frame = 1
Query: 22 PVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTG--TVIDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNV----LELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
PV+ + S PH A+T ST + L++ T I++ RF V YS RSDGKL+ G V+D+KT+ ILR+F+ H A TR R+S D + + S SDDKT R WDLPT + + H+DYVR+ A+PSS + W +G R + V + L+HGAPVEAC+ +PGG L +SAGGN +K VWD+L GG R+LH+ ++HQKT+TCL LDG+G+RL++G LD H+KIY+L+ +++
Sbjct: 43 PVTHIDVSPVTPHHVAITSSTRIHLYSTTTNEIIKTFSRFRDVVYSGTFRSDGKLLVAGGEASHVQVLDIKTRAILRSFKGHTAATRSTRFSSDNVHVLSCSDDKTARYWDLPTGKPLALLGEHSDYVRSSGANPSSHNIWATGSYDHTVKLWDLRTSDQTVSKSSMSLNHGAPVEACMIMPGGSLLLSAGGNSIK--VWDILSGG--RILHSFSSHQKTITCLGLDGSGTRLMSGSLDGHLKIYDLKTYEL 290
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A8K1FPI2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FPI2_PYTOL) HSP 1 Score: 220 bits (560), Expect = 3.960e-65 Identity = 118/252 (46.83%), Postives = 156/252 (61.90%), Query Frame = 1
Query: 22 PVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQA----KGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
PV+ + S +APH+ A+T ST + L++ + + I+S RF V YS RSDGKL+ G V +D+ T+ ILR F+ H A R R+S D + S SDDKT R WDLPT + + H DYVR AASPSS W +G R + + + L HGAPVEAC +PGGGL +SAGGN VK VWDLL GG R+LH+ ++HQKT+T + LDGTG+RLLTG LD H+KIY+L+ ++V
Sbjct: 43 PVTHIDVSPSAPHNIAITTSTRIHLYSTLSNQIIKSFSRFRDVVYSGTFRSDGKLIVAGGEAPQVQVLDINTRAILRTFKGHTAAIRSTRFSTDNTHVLSCSDDKTSRYWDLPTGKPLALLGEHTDYVRCSAASPSSQSIWATGSYDHTVKLWDLRASDQTMSSSTMSLDHGAPVEACFMMPGGGLLMSAGGNVVK--VWDLLSGG--RMLHSFSSHQKTITSIGLDGTGTRLLTGSLDGHLKIYDLKTYEV 290
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A1X2GWQ2_9FUNG (WD40 repeat-like protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GWQ2_9FUNG) HSP 1 Score: 219 bits (559), Expect = 6.360e-65 Identity = 123/247 (49.80%), Postives = 168/247 (68.02%), Query Frame = 1
Query: 25 VSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
+ ++FS APHDF VT ST V +++A T + +++ RF +AYS R DGKL+ GD TG V DV ++ ILR FREHK P V +++ + L S SDDKT+R+WD+PT ++V V +GH DY+R+ S +P+ ++G XXXXXXXX RQ V+ + HGAPVE+ L PGGG VSAGG VK VWDLL GG R L +L+NHQKTVT L+ +G+ SRL+TG LD VK+YN+++++V
Sbjct: 40 IPSIYFSPVAPHDFVVTSSTRVQVYSAKTHQPKKTISRFKDLAYSGSFRHDGKLIVAGDATGLVQIFDVNSRAILRTFREHKMPVHVTKFAKNNQHLMSASDDKTVRIWDIPTESSVNVFEGHDDYIRSGVVSDDNPNLVLTGSYXXXXXXXXMRQDD-CVMTMQHGAPVESILMFPGGGAVVSAGGPHVK--VWDLLSGG--RCLQSLSNHQKTVTSLSFNGSASRLITGSLDHQVKVYNVQDYQV 281
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A507E144_9FUNG (UTP15_C domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E144_9FUNG) HSP 1 Score: 218 bits (556), Expect = 9.180e-65 Identity = 124/249 (49.80%), Postives = 165/249 (66.27%), Query Frame = 1
Query: 19 APVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
A V+ +HFS AP+DFAVT ST V +++ +T +++ RF AYS +R DGKLM GD TG V D+ ++ ILR + H P V ++S D +Q+ SGSDDKT+R+WD+ T V + H DY+RA S +P + XXXXXXXXXX R + + HGAPVE+ L PG GL SAGGN+VK +WD+LGGG R L TLANHQKT+TC+ DGTGSR+LTG LD H+K+Y++ ++KV
Sbjct: 39 AAVTSIHFSPVAPYDFAVTSSTRVQIYSTSTHSVKKTISRFKDTAYSGYIRGDGKLMVAGDATGQVQLFDLGSRAILRTMKGHDGPVHVAKFSPDHMQVLSGSDDKTVRVWDVATEKEVAIFSEHEDYIRAGLVSQENPHLIVXXXXXXXXXXXXLRSTS-CAMTMRHGAPVESLLMFPGSGLVASAGGNQVK--LWDILGGG--RHLQTLANHQKTITCMTFDGTGSRILTGSLDHHLKVYSVRDYKV 282
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Match: A0A1Y2GYS6_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GYS6_9FUNG) HSP 1 Score: 218 bits (556), Expect = 2.670e-64 Identity = 126/249 (50.60%), Postives = 171/249 (68.67%), Query Frame = 1
Query: 19 APVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVAYSAQLRSDGKLMGTGDHTGTV--IDVKTKGILRAFREHKAPTRVVRWSCDGLQLASGSDDKTLRLWDLPTSTAVQVRQGHADYVRALAASPSSPDTWISGXXXXXXXXXXTRQAKGNVLELSHGAPVEACLFLPGGGLCVSAGGNEVKASVWDLLGGGGGRLLHTLANHQKTVTCLALDGTGSRLLTGGLDRHVKIYNLENFKV 759
A VS VHFS T P+DFAVT ST V ++++ T + +++ RF VAYS +R+DGKL+ GD TG + DV ++ ILR FREHK P V ++S D Q+ S SDDKT+R+WD+P+ T + + GH DY+R+ S +P I XXXXXXXXXX + +G V+ ++HG+PVEA P GG+ VSAGG +K V+D+L GG R +H L+NHQKTVT L D + SRLLTG LD+HVKIYN++++ V
Sbjct: 40 AAVSSVHFSETTPYDFAVTASTRVQIYSSKTHQVKKTISRFKDVAYSGTIRADGKLVVAGDATGLIQIFDVSSRAILRTFREHKHPVHVTKFSSDKTQILSASDDKTVRIWDMPSETPLTIFTGHEDYIRSGMVSHDNPHL-IXXXXXXXXXXXXXXRTQGCVMTMNHGSPVEAVEMFPDGGVVVSAGGPSIK--VFDILAGG--RPMHALSNHQKTVTSLCFDNSHSRLLTGSLDQHVKIYNVQDYSV 283 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14216.3082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14216.3082.1 >prot_E-fasciculatus_F_contig14216.3082.1 ID=prot_E-fasciculatus_F_contig14216.3082.1|Name=mRNA_E-fasciculatus_F_contig14216.3082.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=253bp FVQTHNAPVSCVHFSATAPHDFAVTCSTHVSLHAAATGRQIRSVGRFDHVback to top mRNA from alignment at E-fasciculatus_F_contig14216:138..2826+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14216.3082.1 ID=mRNA_E-fasciculatus_F_contig14216.3082.1|Name=mRNA_E-fasciculatus_F_contig14216.3082.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2689bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14216:138..2826+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14216:138..2826+ >mRNA_E-fasciculatus_F_contig14216.3082.1 ID=mRNA_E-fasciculatus_F_contig14216.3082.1|Name=mRNA_E-fasciculatus_F_contig14216.3082.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1518bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14216:138..2826+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |