prot_E-fasciculatus_F_contig1421.3079.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1421.3079.1
Unique Nameprot_E-fasciculatus_F_contig1421.3079.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length148
Homology
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: D8LNR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR1_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 7.550e-85
Identity = 131/149 (87.92%), Postives = 135/149 (90.60%), Query Frame = 0
Query:    1 MEASSYTLPAAFCFIAVQLTFQARRQATPKRPKRGKVKGGXXXXXXXXXX--SAATSQGVHLPTDVAFKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLACERYL 147
            MEASSYTLPAAFCFIAVQLTFQA RQATPKRPKRGKVKGG            SAATSQGV+LPTDVAFKTFIL+A+KDLHGEVGSLAYPVDV+SWDAVSGEGRLRVPARSLVPIRAALS VGSCGDVPCAIDVREVSPFLAGLACERYL
Sbjct:    1 MEASSYTLPAAFCFIAVQLTFQATRQATPKRPKRGKVKGGGTTQRQQQAPQGSAATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSFVGSCGDVPCAIDVREVSPFLAGLACERYL 149          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: A0A6P7YEG8_9AMPH (ribonuclease P protein subunit p14 n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7YEG8_9AMPH)

HSP 1 Score: 70.5 bits (171), Expect = 9.610e-13
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0
Query:   56 QGVHLPTDVAFKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            +GVHL     FK  ILSAL+DLHGEVG+ A P D++++D  S    LR+  R LV + +AL+L+GS  +  CA  V + SPFL  LA
Sbjct:   38 KGVHLNAP-HFKQLILSALRDLHGEVGA-ALPFDILTFDEKSFSAILRISNRGLVKLWSALTLLGSYQNHKCAFRVLQTSPFLLALA 122          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: UPI001CF96997 (ribonuclease P protein subunit p14 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF96997)

HSP 1 Score: 68.6 bits (166), Expect = 5.080e-12
Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   63 DVAFKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            D  FK  I+SALKDLHGEVG+ + P DV+ +D  S    LRV +  LV + +AL+L+GS     CA  V +VSPFL  LA
Sbjct:   42 DAHFKQLIISALKDLHGEVGA-SLPFDVLKFDEKSLSAILRVYSSGLVKLWSALTLLGSYHGKRCAFRVEQVSPFLLSLA 120          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: A0A674IF97_TERCA (Ribonuclease P/MRP subunit p14 n=1 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=A0A674IF97_TERCA)

HSP 1 Score: 68.2 bits (165), Expect = 6.830e-12
Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   66 FKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            FK  ILSALK+LHGEVG+ A PVDV++++  +    LRVP+  LV + +AL+L+GS  +  CA  V + SPFL  L+
Sbjct:   43 FKQLILSALKELHGEVGA-ALPVDVLTYEEKTLSAILRVPSSGLVKLWSALTLLGSYQNRKCAFRVIQTSPFLLALS 118          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: A0A3B3QVM6_9TELE (Ribonuclease P/MRP subunit p14 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3QVM6_9TELE)

HSP 1 Score: 67.4 bits (163), Expect = 1.420e-11
Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   66 FKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            FK  I+SAL+DL+GEVG+ A+P DV+ +D  S    LRV +  LV + +AL+L+GS  +  CA+ V +VSPFL  L+
Sbjct:   45 FKQLIISALRDLYGEVGA-AFPFDVLKFDEASLTAILRVYSSGLVKLWSALTLLGSYHNESCAVRVTQVSPFLLALS 120          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: A0A452GFN8_9SAUR (Ribonuclease P/MRP subunit p14 n=4 Tax=Testudinoidea TaxID=8486 RepID=A0A452GFN8_9SAUR)

HSP 1 Score: 67.4 bits (163), Expect = 1.480e-11
Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   66 FKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            FK  I+SALK+LHGEVG+ A PVDV++++  +    LRVP+  LV + +AL+L+GS  +  CA  V + SPFL  L+
Sbjct:   47 FKQLIISALKELHGEVGA-ALPVDVLTYEEKTLSAILRVPSSGLVKLWSALTLLGSYQNRKCAFRVIQTSPFLLALS 122          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: A0A401P2T2_SCYTO (Uncharacterized protein n=4 Tax=Galeoidea TaxID=119195 RepID=A0A401P2T2_SCYTO)

HSP 1 Score: 67.0 bits (162), Expect = 1.950e-11
Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 0
Query:   66 FKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            FK  I+SALKDLHGE+G+ A PVDV+ ++  +    LRV +  LV + +AL+L+GS  +  CA  V +VSPFL  L+
Sbjct:   44 FKQLIVSALKDLHGEIGA-ALPVDVLRFEGETLTSILRVKSNGLVKLWSALTLLGSYQNQKCAFRVTQVSPFLLALS 119          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: UPI001556DC98 (ribonuclease P protein subunit p14 n=1 Tax=Trachemys scripta elegans TaxID=31138 RepID=UPI001556DC98)

HSP 1 Score: 67.0 bits (162), Expect = 2.090e-11
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0
Query:   66 FKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            FK  ++SALK+LHGEVG+ A PVDV++++  +    LRVP+  LV + +AL+L+GS  +  CA  V + SPFL  L+
Sbjct:   47 FKQLVISALKELHGEVGA-ALPVDVLTYEEKTLSAILRVPSSGLVKLWSALTLLGSYQNRKCAFRVIQTSPFLLALS 122          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: A0A5A9NSM2_9TELE (Ribonuclease P protein subunit p14 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NSM2_9TELE)

HSP 1 Score: 66.2 bits (160), Expect = 3.860e-11
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 0
Query:   62 TDVAFKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            +D  FK  I+SALK+L+GEVG+ A+P D++ +D  S +  LRV  + LV + +AL+L+GS  +  CA  V +VSPFL  L+
Sbjct:   35 SDAQFKQLIISALKELYGEVGA-AFPFDLLKFDPSSLKAILRVYNKGLVKLWSALTLLGSYQNEACAFRVIQVSPFLLALS 114          
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Match: A0A8J6EM83_ELECQ (Uncharacterized protein n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EM83_ELECQ)

HSP 1 Score: 65.9 bits (159), Expect = 5.560e-11
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   64 VAFKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEGRLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLA 142
            V  K+ ILSALK+LHGEVG+ +YP+DV+ +D  +    LR+ +  LV +  +L++VG      C+I V + SPFL  LA
Sbjct:   43 VQLKSLILSALKELHGEVGA-SYPLDVLKFDGKTSSAILRIKSSGLVKLWTSLTMVGQYQGQLCSIRVLQTSPFLLALA 120          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1421.3079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNR1_ECTSI7.550e-8587.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6P7YEG8_9AMPH9.610e-1348.28ribonuclease P protein subunit p14 n=2 Tax=Gymnoph... [more]
UPI001CF969975.080e-1250.00ribonuclease P protein subunit p14 n=1 Tax=Protopt... [more]
A0A674IF97_TERCA6.830e-1249.35Ribonuclease P/MRP subunit p14 n=1 Tax=Terrapene c... [more]
A0A3B3QVM6_9TELE1.420e-1148.05Ribonuclease P/MRP subunit p14 n=2 Tax=Paramormyro... [more]
A0A452GFN8_9SAUR1.480e-1148.05Ribonuclease P/MRP subunit p14 n=4 Tax=Testudinoid... [more]
A0A401P2T2_SCYTO1.950e-1148.05Uncharacterized protein n=4 Tax=Galeoidea TaxID=11... [more]
UPI001556DC982.090e-1146.75ribonuclease P protein subunit p14 n=1 Tax=Trachem... [more]
A0A5A9NSM2_9TELE3.860e-1145.68Ribonuclease P protein subunit p14 n=1 Tax=Triplop... [more]
A0A8J6EM83_ELECQ5.560e-1144.30Uncharacterized protein n=1 Tax=Eleutherodactylus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038085Rnp2-like domain superfamilyGENE3D3.30.70.3250coord: 56..146
e-value: 1.9E-6
score: 29.7
IPR038085Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 62..140
IPR002759Ribonuclease P/MRP protein subunitPFAMPF01900RNase_P_Rpp14coord: 64..135
e-value: 3.4E-5
score: 24.0
NoneNo IPR availablePANTHERPTHR15441FAMILY NOT NAMEDcoord: 62..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1421contigE-fasciculatus_F_contig1421:12156..14363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1421.3079.1mRNA_E-fasciculatus_F_contig1421.3079.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1421 12156..14363 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1421.3079.1 ID=prot_E-fasciculatus_F_contig1421.3079.1|Name=mRNA_E-fasciculatus_F_contig1421.3079.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=148bp
MEASSYTLPAAFCFIAVQLTFQARRQATPKRPKRGKVKGGGTTQQQQQQG
SAATSQGVHLPTDVAFKTFILSALKDLHGEVGSLAYPVDVMSWDAVSGEG
RLRVPARSLVPIRAALSLVGSCGDVPCAIDVREVSPFLAGLACERYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002759RNase_P/MRP_subunit
IPR038085Rnp2-like_sf