mRNA_E-fasciculatus_F_contig14208.3076.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 417 bits (1072), Expect = 7.180e-140 Identity = 236/294 (80.27%), Postives = 249/294 (84.69%), Query Frame = 1
Query: 22 STRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTTVR-GGSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSF-PTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
ST RRASG SSGL C+SSM+ E ED LEEGKLGEALA TTT R GGSAG+VAASA IG+ V TS+ADANGAVAP TW DREPTNSSV TT + +VSND GGNR D VRRGQ E G D GRDGG R+RSHKQDID WDFERI RTPLLA AFEDYSK+ALCHES+LFLSEVSRYQNGDYA TRAS GS PTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEE+FEDVNEEERRMIFRRAYLAVKRMLE NLLLRFLNTDRFKSV MQK +TQ M+D
Sbjct: 309 STARRASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAVT-TSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVD 601
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 335 bits (858), Expect = 1.110e-108 Identity = 198/294 (67.35%), Postives = 221/294 (75.17%), Query Frame = 1
Query: 22 STRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTTVRGGSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGR--DGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
ST R ASG SSG D S I SE+ A LEEG LG L KDETTT G +V ASA +G VI TSTAD N AVA TW +REP N+SV T SS VSNDTS GGNRRD V+RG RER GR GGGR R +++++ W+FER+ARTPLLA AFEDYSKRALCHES LFL+EVSRYQ+ DYATPT+ + S P+QFGTFCYIT+TFIKAGSPEEVNISD ++K IL LY KGEE FEDVNEEERR+IF RAYL VK MLE NLL RFLNTDRFKSV MQ+ N Q MMD
Sbjct: 227 STVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTA--GDVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMD 518
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 308 bits (789), Expect = 2.150e-100 Identity = 164/189 (86.77%), Postives = 169/189 (89.42%), Query Frame = 1
Query: 334 STGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGS-FPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
S GGNR D VRRGQ ERG D GRDGG R+RSHKQDID WDFERI RTPLLA AFEDYSKRALCHES+LFLSEVSRYQNGDYAT RAS GS FPTQFGTFCYITDTFIKAGS EEVNISDKERKLILALYHKGEE+FEDVN EERRMIFRRAYLAVKRMLE NLLLRFLNTDRFKS+ MQK NTQ M+D
Sbjct: 171 SIGGNRLDAVRRGQTERGDDRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVD 359
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 311 bits (796), Expect = 1.280e-99 Identity = 164/189 (86.77%), Postives = 170/189 (89.95%), Query Frame = 1
Query: 334 STGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGS-FPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
S GGNR D VRRGQ ERG D GRDGG R+RSHKQDID WDFERI RTPLLA AFEDYSKRALCHES+LFLSEVSRYQNGDYAT RAS GS FPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEE+FEDVN+ ERRMIFRRAYLAVKRMLE NLLLRFLNTDRFKS+ MQK NTQ M+D
Sbjct: 310 SIGGNRLDAVRRGQSERGDDRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVD 498
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 284 bits (727), Expect = 8.060e-89 Identity = 178/296 (60.14%), Postives = 207/296 (69.93%), Query Frame = 1
Query: 19 SSTRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTT--VRGGSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTR-SHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
S + R ASG S SS I +SED E+ +LG D T V GGS G VA SA +G VI TS+ADANGAVAP W RE T ++ +T+ V +S+ G RRD V+RGQR RG S +++++ WDFER+ RTPLLAAAFEDYSKRALCHES LFLSEVSRYQN DYATPT A+ G+ PTQFGTFC+ITDTFIKAG+PEEVNI RKLIL LY KGEE FE+VNEEERRM+F+R+YLAVK MLE NLL RFLNTD+FKSV Q+ N QAMMD
Sbjct: 248 SHSTRSASGISPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTS----VPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMD 535
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 284 bits (726), Expect = 7.310e-88 Identity = 180/297 (60.61%), Postives = 210/297 (70.71%), Query Frame = 1
Query: 19 SSTRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTT--VRGGSAGHVAASAAI-GRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTR-SHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
S + R ASG S SS I +S+D E+ +LG D T V GGS G VA S+A+ G VI TSTADAN VAPRTW RE T ++ +T+ V + + G RRD V+RGQR RG S +++++ WDFER+ RTPLLAAAFEDYSKRALCHES LFLSEVSRYQN DYATPT A+ G+ PTQFGTFCYITDTFIKAG+PEEVNISDK+RKLIL LY KGEE FE+VNEEERRM+F+R+YL VK MLE NLL RFLNTD+FKSV Q+ N QAMMD
Sbjct: 319 SHSTRSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADAN-VVAPRTWKGREMTIANGSTS----VPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAA-GTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMD 609
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 249 bits (637), Expect = 3.160e-76 Identity = 165/290 (56.90%), Postives = 185/290 (63.79%), Query Frame = 1
Query: 31 RRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTTVRG-GSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPT-QFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMM 891
RR G SS +G S G+SE+ A LEEG+ KD TT G G G V SAAIGR TADA+GAVAP TW +REPTNSSV SS VSND ST G RR +R QR RG R R+RS +++++ WDFERIA TPLLAAAFEDYSKRALCHES LFLSEVSRYQN +Y PTRAS S P QFG+FCYITDTFIKAGS EEVNI RMIF RAY VK MLE NL+LRFLNTDRFK+V +Q+ N +AMM
Sbjct: 201 RRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRG-RRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMM 462
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI) HSP 1 Score: 239 bits (610), Expect = 1.500e-74 Identity = 134/196 (68.37%), Postives = 149/196 (76.02%), Query Frame = 1
Query: 337 TGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQD---IDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTR-ASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMDTQTMI 909
TGGNRRD ++RGQR R G QD ++ W+FER+ARTPLLAAAFEDYSKRALCHES LFLSEVSRYQ+ DYAT R +S S PTQFGTFCYITDTFIK GSPEEVNISD ++K IL +YHKGEE F VNEE+RRMIF AYL VK MLE NLL RFLNTDRFKSV MQ+ N QAMMD+ M+
Sbjct: 80 TGGNRRDALQRGQRNSTRGRGXXXXXXXXXXXQDRGVMEVWNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGVNEEDRRMIFSPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPML 275
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 187 bits (475), Expect = 5.340e-51 Identity = 117/194 (60.31%), Postives = 127/194 (65.46%), Query Frame = 1
Query: 334 STGGNRRDPVRRGQRER-----GRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSF-PTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
STGGNRRD ++RGQR G + ++ W FER+ARTPLLA AFEDYSKRALCHES LFLSEVS YQN DYAT TRAS GS PTQFGT CYITDTF KAGSPEEVN SD ++K I FE+ F AYL VK MLE NLL RFLNTDRFKSV MQ+ N QAMMD
Sbjct: 442 STGGNRRDALQRGQRNSTCGHGGXXXXXXXXXXXXXGRGVMEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAI----------FEND--------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMD 617
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI) HSP 1 Score: 172 bits (436), Expect = 2.320e-50 Identity = 97/153 (63.40%), Postives = 107/153 (69.93%), Query Frame = 1
Query: 439 IDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPT-QFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMM 891
++ WDFERIA TPLLAAAFEDYSKRALCHES LFLSEVSRYQN +Y PTRAS S P QFG+FCYITDTFIKAGSPEEVNI RMIF RA+ VK MLE NL+LRFLNTDRFK+V +Q+ N +AMM
Sbjct: 1 MEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNI---------------------------RMIFSRAHRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMM 126 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14208.3076.1 >prot_E-fasciculatus_F_contig14208.3076.1 ID=prot_E-fasciculatus_F_contig14208.3076.1|Name=mRNA_E-fasciculatus_F_contig14208.3076.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=310bp PPHEFASSTRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDEback to top mRNA from alignment at E-fasciculatus_F_contig14208:2..2970+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14208.3076.1 ID=mRNA_E-fasciculatus_F_contig14208.3076.1|Name=mRNA_E-fasciculatus_F_contig14208.3076.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2969bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14208:2..2970+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14208:2..2970+ >mRNA_E-fasciculatus_F_contig14208.3076.1 ID=mRNA_E-fasciculatus_F_contig14208.3076.1|Name=mRNA_E-fasciculatus_F_contig14208.3076.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1860bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14208:2..2970+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |