mRNA_E-fasciculatus_F_contig14208.3076.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14208.3076.1
Unique NamemRNA_E-fasciculatus_F_contig14208.3076.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE)

HSP 1 Score: 417 bits (1072), Expect = 7.180e-140
Identity = 236/294 (80.27%), Postives = 249/294 (84.69%), Query Frame = 1
Query:   22 STRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTTVR-GGSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSF-PTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
            ST RRASG SSGL C+SSM+  E ED   LEEGKLGEALA   TTT R GGSAG+VAASA IG+ V  TS+ADANGAVAP TW DREPTNSSV TT + +VSND   GGNR D VRRGQ E G D GRDGG R+RSHKQDID WDFERI RTPLLA AFEDYSK+ALCHES+LFLSEVSRYQNGDYA  TRAS GS  PTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEE+FEDVNEEERRMIFRRAYLAVKRMLE NLLLRFLNTDRFKSV MQK +TQ M+D
Sbjct:  309 STARRASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAVT-TSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVD 601          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 1.110e-108
Identity = 198/294 (67.35%), Postives = 221/294 (75.17%), Query Frame = 1
Query:   22 STRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTTVRGGSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGR--DGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
            ST R ASG SSG   D S I   SE+ A LEEG LG  L KDETTT   G   +V ASA +G  VI TSTAD N AVA  TW +REP N+SV T  SS VSNDTS GGNRRD V+RG RER    GR   GGGR R  +++++ W+FER+ARTPLLA AFEDYSKRALCHES LFL+EVSRYQ+ DYATPT+ +  S P+QFGTFCYIT+TFIKAGSPEEVNISD ++K IL LY KGEE FEDVNEEERR+IF RAYL VK MLE NLL RFLNTDRFKSV MQ+ N Q MMD
Sbjct:  227 STVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTA--GDVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMD 518          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 2.150e-100
Identity = 164/189 (86.77%), Postives = 169/189 (89.42%), Query Frame = 1
Query:  334 STGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGS-FPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
            S GGNR D VRRGQ ERG D GRDGG R+RSHKQDID WDFERI RTPLLA AFEDYSKRALCHES+LFLSEVSRYQNGDYAT  RAS GS FPTQFGTFCYITDTFIKAGS EEVNISDKERKLILALYHKGEE+FEDVN EERRMIFRRAYLAVKRMLE NLLLRFLNTDRFKS+ MQK NTQ M+D
Sbjct:  171 SIGGNRLDAVRRGQTERGDDRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVD 359          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.280e-99
Identity = 164/189 (86.77%), Postives = 170/189 (89.95%), Query Frame = 1
Query:  334 STGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGS-FPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
            S GGNR D VRRGQ ERG D GRDGG R+RSHKQDID WDFERI RTPLLA AFEDYSKRALCHES+LFLSEVSRYQNGDYAT  RAS GS FPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEE+FEDVN+ ERRMIFRRAYLAVKRMLE NLLLRFLNTDRFKS+ MQK NTQ M+D
Sbjct:  310 SIGGNRLDAVRRGQSERGDDRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVD 498          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 8.060e-89
Identity = 178/296 (60.14%), Postives = 207/296 (69.93%), Query Frame = 1
Query:   19 SSTRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTT--VRGGSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTR-SHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
            S + R ASG S      SS I  +SED    E+ +LG     D T    V GGS G VA SA +G  VI TS+ADANGAVAP  W  RE T ++ +T+    V   +S+ G RRD V+RGQR RG             S +++++ WDFER+ RTPLLAAAFEDYSKRALCHES LFLSEVSRYQN DYATPT A+ G+ PTQFGTFC+ITDTFIKAG+PEEVNI    RKLIL LY KGEE FE+VNEEERRM+F+R+YLAVK MLE NLL RFLNTD+FKSV  Q+ N QAMMD
Sbjct:  248 SHSTRSASGISPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTS----VPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMD 535          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 7.310e-88
Identity = 180/297 (60.61%), Postives = 210/297 (70.71%), Query Frame = 1
Query:   19 SSTRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTT--VRGGSAGHVAASAAI-GRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTR-SHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
            S + R ASG S      SS I  +S+D    E+ +LG     D T    V GGS G VA S+A+ G  VI TSTADAN  VAPRTW  RE T ++ +T+    V   + + G RRD V+RGQR RG             S +++++ WDFER+ RTPLLAAAFEDYSKRALCHES LFLSEVSRYQN DYATPT A+ G+ PTQFGTFCYITDTFIKAG+PEEVNISDK+RKLIL LY KGEE FE+VNEEERRM+F+R+YL VK MLE NLL RFLNTD+FKSV  Q+ N QAMMD
Sbjct:  319 SHSTRSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADAN-VVAPRTWKGREMTIANGSTS----VPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAA-GTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMD 609          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 3.160e-76
Identity = 165/290 (56.90%), Postives = 185/290 (63.79%), Query Frame = 1
Query:   31 RRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDETTTVRG-GSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVTTTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPT-QFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMM 891
            RR  G SS +G  S    G+SE+ A LEEG+      KD TT   G G  G V  SAAIGR      TADA+GAVAP TW +REPTNSSV    SS VSND ST G RR   +R QR RG    R    R+RS +++++ WDFERIA TPLLAAAFEDYSKRALCHES LFLSEVSRYQN +Y  PTRAS  S P  QFG+FCYITDTFIKAGS EEVNI                           RMIF RAY  VK MLE NL+LRFLNTDRFK+V +Q+ N +AMM
Sbjct:  201 RRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRG-RRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMM 462          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.500e-74
Identity = 134/196 (68.37%), Postives = 149/196 (76.02%), Query Frame = 1
Query:  337 TGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQD---IDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTR-ASPGSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMDTQTMI 909
            TGGNRRD ++RGQR   R  G           QD   ++ W+FER+ARTPLLAAAFEDYSKRALCHES LFLSEVSRYQ+ DYAT  R +S  S PTQFGTFCYITDTFIK GSPEEVNISD ++K IL +YHKGEE F  VNEE+RRMIF  AYL VK MLE NLL RFLNTDRFKSV MQ+ N QAMMD+  M+
Sbjct:   80 TGGNRRDALQRGQRNSTRGRGXXXXXXXXXXXQDRGVMEVWNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGVNEEDRRMIFSPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPML 275          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 5.340e-51
Identity = 117/194 (60.31%), Postives = 127/194 (65.46%), Query Frame = 1
Query:  334 STGGNRRDPVRRGQRER-----GRDLGRDGGGRTRSHKQDIDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSF-PTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMMD 894
            STGGNRRD ++RGQR       G              +  ++ W FER+ARTPLLA AFEDYSKRALCHES LFLSEVS YQN DYAT TRAS GS  PTQFGT CYITDTF KAGSPEEVN SD ++K I          FE+         F  AYL VK MLE NLL RFLNTDRFKSV MQ+ N QAMMD
Sbjct:  442 STGGNRRDALQRGQRNSTCGHGGXXXXXXXXXXXXXGRGVMEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAI----------FEND--------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMD 617          
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.320e-50
Identity = 97/153 (63.40%), Postives = 107/153 (69.93%), Query Frame = 1
Query:  439 IDAWDFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASPGSFPT-QFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDVNEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQK-NTQAMM 891
            ++ WDFERIA TPLLAAAFEDYSKRALCHES LFLSEVSRYQN +Y  PTRAS  S P  QFG+FCYITDTFIKAGSPEEVNI                           RMIF RA+  VK MLE NL+LRFLNTDRFK+V +Q+ N +AMM
Sbjct:    1 MEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNI---------------------------RMIFSRAHRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMM 126          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14208.3076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JE98_9PHAE7.180e-14080.27RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T7_ECTSI1.110e-10867.35RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FTW2_ECTSI2.150e-10086.77RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW0_ECTSI1.280e-9986.77RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5LEP9_9PHAE8.060e-8960.14RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T8_ECTSI7.310e-8860.61RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW1_ECTSI3.160e-7656.90RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2T5_ECTSI1.500e-7468.37RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LA03_9PHAE5.340e-5160.31RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTV9_ECTSI2.320e-5063.40RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14208contigE-fasciculatus_F_contig14208:2..2970 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.6
Seed ortholog evalue1.9e-10
Seed eggNOG ortholog2880.D8LLA9
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2D0MX@1,2SERP@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size930
Cds size930
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14208.3076.1prot_E-fasciculatus_F_contig14208.3076.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14208 2..2970 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927911.1116362-CDS-E-fasciculatus_F_contig14208:1..5581622927911.1116362-CDS-E-fasciculatus_F_contig14208:1..558Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 2..558 +
1695995748.289353-CDS-E-fasciculatus_F_contig14208:1..5581695995748.289353-CDS-E-fasciculatus_F_contig14208:1..558Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 2..558 +
1622927911.1219873-CDS-E-fasciculatus_F_contig14208:1634..17631622927911.1219873-CDS-E-fasciculatus_F_contig14208:1634..1763Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 1635..1763 +
1695995748.302723-CDS-E-fasciculatus_F_contig14208:1634..17631695995748.302723-CDS-E-fasciculatus_F_contig14208:1634..1763Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 1635..1763 +
1622927911.1335547-CDS-E-fasciculatus_F_contig14208:2289..23701622927911.1335547-CDS-E-fasciculatus_F_contig14208:2289..2370Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 2290..2370 +
1695995748.313456-CDS-E-fasciculatus_F_contig14208:2289..23701695995748.313456-CDS-E-fasciculatus_F_contig14208:2289..2370Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 2290..2370 +
1622927911.1456337-CDS-E-fasciculatus_F_contig14208:2807..29701622927911.1456337-CDS-E-fasciculatus_F_contig14208:2807..2970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 2808..2970 +
1695995748.3232903-CDS-E-fasciculatus_F_contig14208:2807..29701695995748.3232903-CDS-E-fasciculatus_F_contig14208:2807..2970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14208 2808..2970 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14208.3076.1

>prot_E-fasciculatus_F_contig14208.3076.1 ID=prot_E-fasciculatus_F_contig14208.3076.1|Name=mRNA_E-fasciculatus_F_contig14208.3076.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=310bp
PPHEFASSTRRRASGSSSGLGCDSSMISGESEDGAMLEEGKLGEALAKDE
TTTVRGGSAGHVAASAAIGRCVIATSTADANGAVAPRTWIDREPTNSSVT
TTVSSYVSNDTSTGGNRRDPVRRGQRERGRDLGRDGGGRTRSHKQDIDAW
DFERIARTPLLAAAFEDYSKRALCHESYLFLSEVSRYQNGDYATPTRASP
GSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEEVFEDV
NEEERRMIFRRAYLAVKRMLETNLLLRFLNTDRFKSVSMQKNTQAMMDTQ
TMIASTPLR*
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mRNA from alignment at E-fasciculatus_F_contig14208:2..2970+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14208.3076.1 ID=mRNA_E-fasciculatus_F_contig14208.3076.1|Name=mRNA_E-fasciculatus_F_contig14208.3076.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2969bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14208:2..2970+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCCCTCACGAATTCGCTAGCAGCACGAGGAGAAGAGCGTCGGGGTCTTC TTCAGGATTGGGCTGCGACTCGTCAATGATATCTGGCGAAAGCGAAGATG GAGCCATGCTCGAGGAAGGGAAGCTTGGAGAGGCCCTAGCCAAGGACGAA ACAACAACAGTACGGGGAGGTAGCGCTGGCCATGTCGCCGCCTCGGCCGC GATCGGCAGGTGTGTGATTGCCACATCCACCGCCGACGCCAACGGTGCTG TCGCTCCCCGCACGTGGATCGACCGGGAACCAACAAATTCCTCCGTCACG ACGACTGTGTCATCGTACGTATCCAATGACACCAGCACCGGTGGCAATCG ACGTGATCCTGTCCGAAGGGGGCAGAGAGAGAGAGGCCGCGACCTCGGCC GCGATGGCGGTGGTCGAACTCGCTCGCATAAACAGGACATAGACGCGTGG GACTTCGAGCGGATTGCGAGGACGCCCCTGCTGGCCGCCGCGTTCGAAGA CTACTCCAAGAGGGCGCTTTGCCACGAGTCGTACCTCTTTCTGAGCGAGG TTTCTCGGTGAGTAAAGTCCGGGGGGGGGCGGCACAAATGAGCAGAGAGA CACCCCACCAGAGGGAGAAGGGATAGTGCGGTGGTAATTATGGTGTGCTG ATGTCGTGCGCATGCTGGTTGTTCCCTCATCCTGTTTGTGACCTTGTTTT CCGACACTATGGCGTGGATTGGATGTCCTGGTGCGCTGTAGCCAGTGAAG ATAGCAGCAGTCCTGCTGTATGATCCTAAAGTCGGCGGGCACCCTGCGGA TCCCTTACGTTTCGAAGGCGTACGGTGTCTCCGAGTATTTCCTGCGGTCT GCGCCGCCATGGATTCCTACGTAATCGGCTTGAGTCACCTATATGAAACC CGTGGGTCGCTGCGGGGTTCCCTTCCACGGCGAACGCTGTATGCCCCAAG AGTGTTGCACCCCCATGCCGGGAAGATATCCATGGACATTTTTATGAAAC CGCCGTCACGAGAGTAGAGTTTCTTCGGTGGGACATTTGAGCGGCCGTTC CGACTGTGGCACTGGGGCGTGCCTGTTTAGCAGGCTGCGCACTGTCCTCA GCTCCGCGTACTGTATTCAGTTCTGCGTACTGCACTTACCTCTGTAACAG AGTTGTTGCCTGCATCACCTTCCTGCCGCTGAGGTCAAAACGGGCTGTTA GAAAGCGTGTGAAGGGCAAAACGCATTTTGTCGTGATGAAATGGCGAAGC CCTTCCCGCCGCATACAGCCCGGCTGCGCGCTTCAGGACACCTCTTTGTA GCCACCTTGCCATCGCTTCGCAGTCACGCTCTTTGTCTCGCGTGGACAAG CGCGTGCTAAGCGCGACGCAGAATCGAGCGCATGGGACACCTACTTCGCG CTTTCTTTTCTTGTTGCATACAACTCAGCGAAAAGACACTTCGCCGAAAA TTTCATATCGTCTCCGGAGTATTGTCATCGATGTTTCCCTGTGCGTTGCT GGTACGTTTCAATATTGGAGCCAATGAACATCTCATCGAGCTACAAGTCT GTTTGAGGATTGCTTCGACCCCAGCATTCACTCTCGGTCAAATCGACGCC CGAAACCCTTTTTTCTCTCTTTTTTCGCGTCAGGTACCAGAACGGCGACT ATGCCACGCCAACAAGAGCATCTCCGGGGTCATTTCCGACTCAGTTCGGC ACGTTCTGCTACATCACGGACACCTTCATCAAGGCCGGCTCACCTGAGGA AGTAAACATCAGGTGAGCTGCAACAGAGAACGGCGAGCACGACTCAGAAC ACGATCAAAGAAGTGGATGTTAAGTTTTCGTATTTGCGAACGCCACCAAA CCTTCGTCTGGTCGGACGTGATGCTATCATCGCGGCGGCGATTGCATTCA AGCCAGTTCGGAATCGGCGTTTATTTCAGGGATTGTTGTCGGGACTCGAG GTGAGGCTGGGTGACGATTGGTCCAGCACGCCATGCGGTGTAAGAGGCTT CAGTAATTTGGTCTTCTGCAGTACCAGCATGAACGTGGAGCAAAGGGCCA CCCCAGTTCACGATCCGGCCACAAACCTCATATCAGTTCGACATGGGTAC CATGTTTTCCCCCAGGCTTCCTTTGAGAGGGCATCAGTTCCGATCGACCC GCACGACGTTCCGGGTGATTCGTGTCTGTGGAGCTCCTTTGCCGATTGCC TTCTGTTGGCTGTTGTGCTGCTCGACTTTGTGACAAAGGGCCCCGTTCGT TGCTCCCATGCTTGTTTCGTAACTGTCTCGTACTGCAGCGACAAGGAAAG GAAGCTGATACTCGCGTTGTACCACAAGGGTGAAGAGGTCTTCGAGGACG TCAACGAGGAGGAGAGAAGGTAAACGACAATATTCATGACAGGAGAAAAG CGCGTGTTGACACAGACTCTTTTCCGACGCTTGTCCGTACTCGCGTGCCT TTTCGTTGGTCGTGGAAGATATATCATGTAGTTCTGATTGGCGTCATCTC ACTTTCCCAGACATCAGAGGAAGAGAGTGTTTTTCAAGCATCAAACCACG TTAGTATTTTCCGTAAAAGTGTCGTATCCTCCGGCACTGTGACCCACGCG CAAGCACCTGGATGGTGCGCGTGAAGGAGATTCTGTTGGATATGGTGGGG CCGCCGATCCCGTCCGCCCAGGATTCACGTAGAACCGTGTGCTCGTTTTG ACAAGGGGTGGATAACGGCCAGGGCCAAGGCAGTGCGGCAGAGCTGAAAG CCCGAACTCCCCCCCCGTTAACCACAGCCCATACACCTCAAAATCACGGC TCTCAGGATGATCTTCAGACGAGCGTATCTGGCAGTGAAGCGTATGCTGG AAACCAATCTTCTCCTCCGCTTTCTGAACACGGACCGCTTCAAGAGCGTG AGCATGCAGAAGAATACCCAGGCTATGATGGACACCCAGACTATGATAGC CTCCACGCCCCTGCGCTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14208:2..2970+

>mRNA_E-fasciculatus_F_contig14208.3076.1 ID=mRNA_E-fasciculatus_F_contig14208.3076.1|Name=mRNA_E-fasciculatus_F_contig14208.3076.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1860bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14208:2..2970+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CCCCCTCACGAATTCGCTAGCAGCACGAGGAGAAGAGCGTCGGGGTCTTC
TTCAGGATTGGGCTGCGACTCGTCAATGATATCTGGCGAAAGCGAAGATG
GAGCCATGCTCGAGGAAGGGAAGCTTGGAGAGGCCCTAGCCAAGGACGAA
ACAACAACAGTACGGGGAGGTAGCGCTGGCCATGTCGCCGCCTCGGCCGC
GATCGGCAGGTGTGTGATTGCCACATCCACCGCCGACGCCAACGGTGCTG
TCGCTCCCCGCACGTGGATCGACCGGGAACCAACAAATTCCTCCGTCACG
ACGACTGTGTCATCGTACGTATCCAATGACACCAGCACCGGTGGCAATCG
ACGTGATCCTGTCCGAAGGGGGCAGAGAGAGAGAGGCCGCGACCTCGGCC
GCGATGGCGGTGGTCGAACTCGCTCGCATAAACAGGACATAGACGCGTGG
GACTTCGAGCGGATTGCGAGGACGCCCCTGCTGGCCGCCGCGTTCGAAGA
CTACTCCAAGAGGGCGCTTTGCCACGAGTCGTACCTCTTTCTGAGCGAGG
TTTCTCGCCCCCTCACGAATTCGCTAGCAGCACGAGGAGAAGAGCGTCGG
GGTCTTCTTCAGGATTGGGCTGCGACTCGTCAATGATATCTGGCGAAAGC
GAAGATGGAGCCATGCTCGAGGAAGGGAAGCTTGGAGAGGCCCTAGCCAA
GGACGAAACAACAACAGTACGGGGAGGTAGCGCTGGCCATGTCGCCGCCT
CGGCCGCGATCGGCAGGTGTGTGATTGCCACATCCACCGCCGACGCCAAC
GGTGCTGTCGCTCCCCGCACGTGGATCGACCGGGAACCAACAAATTCCTC
CGTCACGACGACTGTGTCATCGTACGTATCCAATGACACCAGCACCGGTG
GCAATCGACGTGATCCTGTCCGAAGGGGGCAGAGAGAGAGAGGCCGCGAC
CTCGGCCGCGATGGCGGTGGTCGAACTCGCTCGCATAAACAGGACATAGA
CGCGTGGGACTTCGAGCGGATTGCGAGGACGCCCCTGCTGGCCGCCGCGT
TCGAAGACTACTCCAAGAGGGCGCTTTGCCACGAGTCGTACCTCTTTCTG
AGCGAGGTTTCTCGGTACCAGAACGGCGACTATGCCACGCCAACAAGAGC
ATCTCCGGGGTCATTTCCGACTCAGTTCGGCACGTTCTGCTACATCACGG
ACACCTTCATCAAGGCCGGCTCACCTGAGGAAGTAAACATCAGGTACCAG
AACGGCGACTATGCCACGCCAACAAGAGCATCTCCGGGGTCATTTCCGAC
TCAGTTCGGCACGTTCTGCTACATCACGGACACCTTCATCAAGGCCGGCT
CACCTGAGGAAGTAAACATCAGCGACAAGGAAAGGAAGCTGATACTCGCG
TTGTACCACAAGGGTGAAGAGGTCTTCGAGGACGTCAACGAGGAGGAGAG
AAGCGACAAGGAAAGGAAGCTGATACTCGCGTTGTACCACAAGGGTGAAG
AGGTCTTCGAGGACGTCAACGAGGAGGAGAGAAGGATGATCTTCAGACGA
GCGTATCTGGCAGTGAAGCGTATGCTGGAAACCAATCTTCTCCTCCGCTT
TCTGAACACGGACCGCTTCAAGAGCGTGAGCATGCAGAAGAATACCCAGG
CTATGATGGACACCCAGACTATGATAGCCTCCACGCCCCTGCGCTAGGAT
GATCTTCAGACGAGCGTATCTGGCAGTGAAGCGTATGCTGGAAACCAATC
TTCTCCTCCGCTTTCTGAACACGGACCGCTTCAAGAGCGTGAGCATGCAG
AAGAATACCCAGGCTATGATGGACACCCAGACTATGATAGCCTCCACGCC
CCTGCGCTAG
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