prot_E-fasciculatus_F_contig10010.30.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10010.30.1
Unique Nameprot_E-fasciculatus_F_contig10010.30.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length179
Homology
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D8LI44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI44_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 1.320e-112
Identity = 159/179 (88.83%), Postives = 167/179 (93.30%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQVGRLPIIHHFKHHCTRRCGVYCFLTT 179
            MWRPWAQVALLTVPWC PAVVYTADEDL PFNETRNWCESYRPVE FTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQL+FLLVTGTVV PLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLE+LRTEFEKFAE+R+A+ELPDFYQ G L II  FK + TR+CG+YCF TT
Sbjct:    1 MWRPWAQVALLTVPWCFPAVVYTADEDLAPFNETRNWCESYRPVESFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNFFMKSSFRDQLSLEDLRTEFEKFAEQRLAKELPDFYQGGCLLIIQTFKPY-TRKCGMYCFSTT 178          
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: A0A6H5K1F7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F7_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 4.150e-77
Identity = 141/251 (56.18%), Postives = 146/251 (58.17%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFF-------------------------------------------------------------------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQV 154
            MWRPWAQVALLT+PWC PAVVYT DEDL PFNETRNWCESYRPV+ FTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQL+FLLVTGTVV PLQHAILDHRHEIRRIWVLYHN F                                                                                                 MKSSFRDQLSLEELRTEF KFAE+R+ARELPDFYQ 
Sbjct:  430 MWRPWAQVALLTLPWCFPAVVYTTDEDLAPFNETRNWCESYRPVQSFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLTFLLVTGTVVFPLQHAILDHRHEIRRIWVLYHNLFDSLVLFWPPIAEPMYRYLTGDEEYLHSYTHGFSTLPTPAQVQDSIPEHVVLDTELRQNILQPVTGCIAFVVFPSLHSCAVTAAIAHFPSSCFPFVSQMKSSFRDQLSLEELRTEFGKFAEERLARELPDFYQA 680          
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D7G0B4_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B4_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 3.000e-71
Identity = 117/194 (60.31%), Postives = 132/194 (68.04%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFF----------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQV 154
            MW PWAQV LLTVPWC+PAV YT D+ L+ FNE RNWCE YRP++ FTY+L   LIA AFVLVYQMRKVRKQMNEY LQVFQL+FLL+TG+VV PLQH +LD++H IRRIWVLYHNF                                         MK S RDQLSL+ELRTEF+KFAE RMARELP+FYQ 
Sbjct:   67 MWPPWAQVLLLTVPWCIPAVAYTIDDHLSRFNEVRNWCEIYRPIDTFTYILGSSLIASAFVLVYQMRKVRKQMNEYRLQVFQLAFLLLTGSVVFPLQHLLLDNKHGIRRIWVLYHNFLDSLVLFWPPIAEPMYRYLTGDVDYLNSYTQGFSTLPTPAQMKGSLRDQLSLDELRTEFQKFAENRMARELPEFYQA 260          
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D7G7J3_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J3_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.430e-38
Identity = 83/194 (42.78%), Postives = 105/194 (54.12%), Query Frame = 0
Query:    1 MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRHEIRRIWVLYHNFF----------------------------------------MKSSFRDQLSLEELRTEFEKFAEKRMARELPDFYQV 154
            MW  WAQVALL++PW +P V Y+    L+ FNE  NWC+    ++   YV  G+ I GAF L +QMR+VRKQMN Y +QV QL FL VTGT++ PL    L     IRR W++Y N                                          M+S  +DQLSLEELR EFEKFA+ ++ARELPDFY+ 
Sbjct:   97 MWPAWAQVALLSIPWLVPVVAYSIKPSLSEFNELGNWCDINVAIDTALYVYGGVPIIGAFFLSFQMRRVRKQMNFYRMQVLQLLFLFVTGTIIFPLLEESLHSN--IRRTWIMYDNIVSSIILFWPPIIEPLYRKLSGDEDYLYSYTKGFSQLPTPAQMRSCLKDQLSLEELRCEFEKFADSKVARELPDFYKA 288          
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Match: D7FTZ5_ECTSI (Signal transducer, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTZ5_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 1.630e-7
Identity = 54/189 (28.57%), Postives = 83/189 (43.92%), Query Frame = 0
Query:    7 QVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYVLDG----LLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAILDHRH-EIRRIWVLYHNFFMK-------------------------SSFRDQLSLEELRTEFEKFAEKRMARELPDFY--QVGRLPIIHHF 163
            QV LL+    +P ++   D DL  F+ET N C +          +D     +++    V   Q+R VRKQ NEY    + LS L +       +   ILD  H  +RR+ + +  F MK                         ++   QLS+E+LR EF ++ E ++A EL DFY   + R  I+ +F
Sbjct:  103 QVLLLSSTGLIPLLLAILDPDLFFFDETANSCGTSTGATRVVLGMDAFGFSMILCLWLVCARQLRWVRKQFNEYEAMKWTLSCLTILLFSYAIVVAIILDGHHCYVRRVAIAWEPFKMKLTGNAEYLYSFTQGFSEMPSPAQLKANLAQQLSVEQLRVEFRRYIEAKVAHELVDFYLDSLDREEIMEYF 291          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10010.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LI44_ECTSI1.320e-11288.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K1F7_9PHAE4.150e-7756.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B4_ECTSI3.000e-7160.31RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G7J3_ECTSI1.430e-3842.78RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTZ5_ECTSI1.630e-728.57Signal transducer, putative n=1 Tax=Ectocarpus sil... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..64
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..179
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..23
score: 0.664
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 44..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10010contigE-fasciculatus_F_contig10010:59..4285 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10010.30.1mRNA_E-fasciculatus_F_contig10010.30.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10010 59..4285 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10010.30.1 ID=prot_E-fasciculatus_F_contig10010.30.1|Name=mRNA_E-fasciculatus_F_contig10010.30.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp
MWRPWAQVALLTVPWCLPAVVYTADEDLTPFNETRNWCESYRPVEYFTYV
LDGLLIAGAFVLVYQMRKVRKQMNEYHLQVFQLSFLLVTGTVVLPLQHAI
LDHRHEIRRIWVLYHNFFMKSSFRDQLSLEELRTEFEKFAEKRMARELPD
FYQVGRLPIIHHFKHHCTRRCGVYCFLTT
back to top