mRNA_E-fasciculatus_F_contig1415.3041.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1415.3041.1
Unique NamemRNA_E-fasciculatus_F_contig1415.3041.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1415.3041.1 vs. uniprot
Match: D7FQG5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG5_ECTSI)

HSP 1 Score: 1160 bits (3001), Expect = 0.000e+0
Identity = 704/875 (80.46%), Postives = 722/875 (82.51%), Query Frame = 2
Query:    2 ARRSSEGGVADGGELGWSTGPDYLLVLRSRHCQTLGLVELREEAKSGLIVENSSLQDALLAVTRSLGWESLRTCWLETCLAARSDHERHTLASEALRFVIANGGHVKAASFMLGVGGADANGVDSRLLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTRAAAARGGKLWSPLEMAEEACTEGGALDDASVAVG---------PAALYVLRGLVCLQCNLKLPRPERCGTCKLTFCKSCRGSHFCAGGXXXXXXXXXXXXXXX-----------RARLESTTLWELGSAIGDDWEELFNEGNANARGGVARGAGVEEDGWKPGGLRRSGPGTITSTEEIMEASVGSSCLSLSSSPVPWETMPSALLGTWERRPQTTVPKDRHRLFDNSAAFVRACFPAQQTWLQHHMEEEMGLSLGGTLSRHGWGGPFKDLGLDGEHFNPEIMQAASSTELHRHMSWVMAESGVPWEANDDAWCCPECFILFSLNVFRHHCRGCGQVYCSAHAPPTPVPPDDRPLKLCWSCVLEGAVPLPASLLEXXXXXXXXX--VFDENSILGMSPNTARGIAAEQELLSPTVASMNLDAATAXXXXXXXXXXXXXXYIAPPQPDPDCLSGQAGSERKQRGHRA---------KAGSVGGSIEGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLSALVSLIEVVASPTSPMRSXXXXXXXXXK-PDVHASGRPPQSPAKPPAVAAETRGDDAGDAPGVXXXXXXXENWRAGWSTPPPSGEGLAIEAQQQPSGGRGQEAESSPLRLRKEYDSGSESRXXXXXXXXXXXXGGFNSHSTAGSLAESVDDGYGANGNARGVVDEAALFEETPPAELGFPSERPWALGFGN 2530
            A+RSSEGGVAD GELGWSTGPDYLLVLRSRHCQTLGLVELREEAKSGLIVE+SSLQDALLAVTRSLGW+SLRTCWLETCLAARSDHERHTLAS+ALRFVIANGGHVKAASFMLGVGGADAN VDSRLLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTRAAAARGGKLWSPLEMAEEACTEGGALDD +   G         PA  + L G                           RG+    GGXXXXXXXXXXXXXXX           R RLES TLWELGSAIGDDWEELFNEGNANARGGVARG+GVEED WKPGGLRR GPGTITSTEEIMEASVG SCLS+SSSPVPWETMPS LLGTWERRPQTTVPKDRHRLFDNSAAFVRACFPAQ TWLQHHMEEEMGLSLGGTLSRHGWGGPFK LG+DGEHFNPEIMQAASST LHRHMSWVMAESGVPWEANDDAWCCPECFILFSLNVFRHHCRGCGQVYCSAH PPTPVP DDRPLKLCWSCVLEGAVPLPASL+EXXXXXXXXX  VFDEN ILGMSP++ARGIAAEQELLSPTVA MNLDAATA              YIAPPQ +PD L GQ GSE                 KAGS+GGSIEGG      XXXXXXXXXXXXXXXXXXXXXX     FLSALVSLIEVVASPTSPMRS  XXXXXXXK PDV   GRPPQSPAKP AVAAET  +DAGDAPGV       +NWRAGWST P SGEGLAIEAQQQPSGGRG+EAESSPLRLRKEYD      XXXXXXXXXXXXGGFNSHST GSLAESVDDG GANGNA GV D AA FEETPP ELGFPSERPWALGFGN
Sbjct:  251 AKRSSEGGVADAGELGWSTGPDYLLVLRSRHCQTLGLVELREEAKSGLIVEHSSLQDALLAVTRSLGWDSLRTCWLETCLAARSDHERHTLASQALRFVIANGGHVKAASFMLGVGGADANEVDSRLLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTRAAAARGGKLWSPLEMAEEACTEGGALDDGAALGGGPIRAAGSNPARAWELGG---------------------------RGAANVEGGXXXXXXXXXXXXXXXXXXXXXXXXXXRDRLESATLWELGSAIGDDWEELFNEGNANARGGVARGSGVEEDSWKPGGLRRPGPGTITSTEEIMEASVGPSCLSMSSSPVPWETMPSVLLGTWERRPQTTVPKDRHRLFDNSAAFVRACFPAQ-TWLQHHMEEEMGLSLGGTLSRHGWGGPFKGLGMDGEHFNPEIMQAASSTGLHRHMSWVMAESGVPWEANDDAWCCPECFILFSLNVFRHHCRGCGQVYCSAHTPPTPVPSDDRPLKLCWSCVLEGAVPLPASLVEXXXXXXXXXXXVFDENPILGMSPSSARGIAAEQELLSPTVAVMNLDAATAAAAAGAA-------YIAPPQHNPDYLRGQTGSEXXXXXXXXXXXXXXXXXKAGSIGGSIEGGX-----XXXXXXXXXXXXXXXXXXXXXXVGGSGFLSALVSLIEVVASPTSPMRSRGXXXXXXXKKPDV-VPGRPPQSPAKPLAVAAETGVEDAGDAPGVGKGGG--QNWRAGWSTLPASGEGLAIEAQQQPSGGRGEEAESSPLRLRKEYDXXXXXXXXXXXXXXXXXXGGFNSHSTGGSLAESVDDGGGANGNAHGVADGAASFEETPPPELGFPSERPWALGFGN 1082          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1415.3041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQG5_ECTSI0.000e+080.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1415contigE-fasciculatus_F_contig1415:2..5122 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score964.5
Seed ortholog evalue2.7e-278
Seed eggNOG ortholog2880.D7FQG5
KEGG koko:K20242
EggNOG free text desc.regulation of vesicle fusion
EggNOG OGsKOG4436@1,KOG4436@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-01_006180.1
Exons8
Model size3019
Cds size2199
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1415.3041.1prot_E-fasciculatus_F_contig1415.3041.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1415 583..4636 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927906.1485176-UTR-E-fasciculatus_F_contig1415:1..1701622927906.1485176-UTR-E-fasciculatus_F_contig1415:1..170Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1415 2..170 +
1695995746.4115577-UTR-E-fasciculatus_F_contig1415:1..1701695995746.4115577-UTR-E-fasciculatus_F_contig1415:1..170Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1415 2..170 +
1622927906.1749253-UTR-E-fasciculatus_F_contig1415:417..5821622927906.1749253-UTR-E-fasciculatus_F_contig1415:417..582Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1415 418..582 +
1695995746.427233-UTR-E-fasciculatus_F_contig1415:417..5821695995746.427233-UTR-E-fasciculatus_F_contig1415:417..582Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1415 418..582 +
1622927906.560581-UTR-E-fasciculatus_F_contig1415:4636..51221622927906.560581-UTR-E-fasciculatus_F_contig1415:4636..5122Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1415 4637..5122 +
1695995746.5204794-UTR-E-fasciculatus_F_contig1415:4636..51221695995746.5204794-UTR-E-fasciculatus_F_contig1415:4636..5122Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1415 4637..5122 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927906.192746-CDS-E-fasciculatus_F_contig1415:582..8171622927906.192746-CDS-E-fasciculatus_F_contig1415:582..817Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 583..817 +
1695995746.4419165-CDS-E-fasciculatus_F_contig1415:582..8171695995746.4419165-CDS-E-fasciculatus_F_contig1415:582..817Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 583..817 +
1622927906.208817-CDS-E-fasciculatus_F_contig1415:994..11371622927906.208817-CDS-E-fasciculatus_F_contig1415:994..1137Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 995..1137 +
1695995746.4564948-CDS-E-fasciculatus_F_contig1415:994..11371695995746.4564948-CDS-E-fasciculatus_F_contig1415:994..1137Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 995..1137 +
1622927906.2236564-CDS-E-fasciculatus_F_contig1415:1205..13371622927906.2236564-CDS-E-fasciculatus_F_contig1415:1205..1337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 1206..1337 +
1695995746.4676526-CDS-E-fasciculatus_F_contig1415:1205..13371695995746.4676526-CDS-E-fasciculatus_F_contig1415:1205..1337Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 1206..1337 +
1622927906.2348287-CDS-E-fasciculatus_F_contig1415:1797..20941622927906.2348287-CDS-E-fasciculatus_F_contig1415:1797..2094Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 1798..2094 +
1695995746.4823303-CDS-E-fasciculatus_F_contig1415:1797..20941695995746.4823303-CDS-E-fasciculatus_F_contig1415:1797..2094Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 1798..2094 +
1622927906.5161638-CDS-E-fasciculatus_F_contig1415:2458..25551622927906.5161638-CDS-E-fasciculatus_F_contig1415:2458..2555Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 2459..2555 +
1695995746.4907143-CDS-E-fasciculatus_F_contig1415:2458..25551695995746.4907143-CDS-E-fasciculatus_F_contig1415:2458..2555Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 2459..2555 +
1622927906.5303934-CDS-E-fasciculatus_F_contig1415:2932..31021622927906.5303934-CDS-E-fasciculatus_F_contig1415:2932..3102Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 2933..3102 +
1695995746.4993472-CDS-E-fasciculatus_F_contig1415:2932..31021695995746.4993472-CDS-E-fasciculatus_F_contig1415:2932..3102Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 2933..3102 +
1622927906.543473-CDS-E-fasciculatus_F_contig1415:3511..46361622927906.543473-CDS-E-fasciculatus_F_contig1415:3511..4636Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 3512..4636 +
1695995746.509587-CDS-E-fasciculatus_F_contig1415:3511..46361695995746.509587-CDS-E-fasciculatus_F_contig1415:3511..4636Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1415 3512..4636 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1415.3041.1

>prot_E-fasciculatus_F_contig1415.3041.1 ID=prot_E-fasciculatus_F_contig1415.3041.1|Name=mRNA_E-fasciculatus_F_contig1415.3041.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=733bp
MLGVGGADANGVDSRLLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTR
AAAARGGKLWSPLEMAEEACTEGGALDDASVAVGPAALYVLRGLVCLQCN
LKLPRPERCGTCKLTFCKSCRGSHFCAGGGGSGSRSADSGGGGGRARLES
TTLWELGSAIGDDWEELFNEGNANARGGVARGAGVEEDGWKPGGLRRSGP
GTITSTEEIMEASVGSSCLSLSSSPVPWETMPSALLGTWERRPQTTVPKD
RHRLFDNSAAFVRACFPAQQTWLQHHMEEEMGLSLGGTLSRHGWGGPFKD
LGLDGEHFNPEIMQAASSTELHRHMSWVMAESGVPWEANDDAWCCPECFI
LFSLNVFRHHCRGCGQVYCSAHAPPTPVPPDDRPLKLCWSCVLEGAVPLP
ASLLEEDDDDDDDDVFDENSILGMSPNTARGIAAEQELLSPTVASMNLDA
ATAAAAAGAAAAAAGAAYIAPPQPDPDCLSGQAGSERKQRGHRAKAGSVG
GSIEGGRGGGGRGGGGGGGDEERKQQGHRKKAASVGGGGFLSALVSLIEV
VASPTSPMRSRGGGGGGGKKPDVHASGRPPQSPAKPPAVAAETRGDDAGD
APGVGGGGGGGENWRAGWSTPPPSGEGLAIEAQQQPSGGRGQEAESSPLR
LRKEYDSGSESRTQLSPLRLRKEFGGFNSHSTAGSLAESVDDGYGANGNA
RGVVDEAALFEETPPAELGFPSERPWALGFGN*
back to top

mRNA from alignment at E-fasciculatus_F_contig1415:2..5122+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1415.3041.1 ID=mRNA_E-fasciculatus_F_contig1415.3041.1|Name=mRNA_E-fasciculatus_F_contig1415.3041.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=5121bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1415:2..5122+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGCGAGGCGGTCGAGCGAAGGAGGCGTCGCCGACGGCGGGGAGCTGGGCT GGTCCACTGGGCCTGACTATTTGCTTGTGCTCCGTTCCCGCCACTGCCAG ACGTTGGGCCTGGTGGAGCTGAGGGAAGAGGCCAAGAGCGGCCTGATCGT GGAGAACTCTTCGCTGCAGGTGAAGAGCGGAACTAGGAGGGGGGGGGGTC GATGTGTGAGGTGTGTCCCGCCTATGGCAAACAAGCGAGTGTGCGGGACG CCAGCACCGGCGCAGAAACACACTCGTCGTGGCGTGTTTTTTTTGTCGGA CCTCGTCCCATTCTTGTCGCTTGCCTGACATTACACCACACCCATGCCTT TCTACTGCTGCCTGCCGCTGTTTTCACTGCTGTTGCTGTGATCCGTGTGC CCTGGATGATGCGCAGGACGCCCTGCTGGCGGTGACCCGGTCTCTCGGCT GGGAGAGCCTGCGGACCTGCTGGTTGGAGACCTGTCTCGCCGCCCGGAGC GACCACGAGCGACACACCCTCGCGAGCGAGGCCCTGCGGTTCGTGATAGC CAACGGGGGCCACGTGAAGGCGGCCTCGTTCATGCTCGGGGTGGGCGGGG CGGACGCGAACGGGGTGGACTCGCGCCTCCTGTCTCCACTCCACCTCGTG GCAATGTTCAACCGCCCGGACATCGCGAGGGTGCTGCTCATGTGCGGGGC GTCTCCCCGGCTGGTCGGAGGGGTCACCCGGGCCGCGGCGGCGCGGGGAG GGAAGCTCTGGTCCCCCTTGGAGATGGCGGAGGAGGCGTGCACGGAAGGA GGTGCTCTGGACGATGGTGAGAGAGGTGACATCGTTAGGGGGGGGTCTCT TCGAGAGCGGCCGAGTTGAAAGCATGTTTTGTTCTGCAGGCTGCGAATGT GTCCGTCGTTACAACCTTTTTCACGCGTCGTGCTTTTACTGTTGCTGTTC TACGGTTTTGCTTGCTTTCCTTTCCTGCACGGTGCCGCTGCAGCGAGTGT CGCGGTAGGGCCCGCGGCGCTGTACGTCCTTCGGGGCCTGGTGTGTCTCC AGTGCAACCTGAAGCTGCCGAGACCCGAGCGGTGCGGGACTTGCAAGCTC ACCTTCTGCAAGTCGTGCCGCGGCAGCCACTTCTGCGTGGGGAAGCTCAA CCTGCCTCGAGGAGTTGCAGAGATTGGGGAAGGCGGTGGCGGCGGCCGTA CCAGGCCGGGGGGGGGGGTAGTGGTTCGAGAAGCGCCGATTCAGGCGGAG GTGGCGGAAGGGCTAGGCTTGAGAGCACCACGCTATGGGAGTTGGGAAGC GCGATTGGGGACGACTGGGAAGAGCTGTTTAACGAGGTGAGGAGGGAGCA AAGAAGGGAGGAGGCGGGGCAAGCTCATGGTGCAGGCGTTGGGTCTTCAA TGGAGATATGGGGTGGGGGGAGAGGTATCTGACGGTACGAAGTCGCTAGC AAGTGAATAGAGGGGGGGTGGAACGGGTGGACATTCCGAATGACAAACCG GTGTTGGGGCCGAGCCCCTAGTCTCGGGCTACCTGAAGCGGCCCGGACAC CACCACGAAATATCTATCTTACCACTACCACATCCCGCCTGAAAACTTCC CGCATCCTTGTCCAGTTCAAAAGCAGCTAGCTTTAACTGGCCCGGCCCTG TCTGGTGCAACTCATTCGTAGCTGCGACGCCCCCAAGACGTTAGCTTACC CTTTTCCGCTGCTCCTGATGGGATGACCCGCACTGATTTTCTTCCCCCGC TGCTTTCTGGTTCGCGAAACGACAAAAAAAAAACCGTTACATATAGGGAA ACGCAAACGCCCGAGGTGGAGTTGCGCGCGGAGCGGGTGTGGAGGAGGAT GGCTGGAAGCCGGGGGGGCTCCGACGGTCGGGACCCGGGACGATCACTTC GACCGAGGAGATCATGGAGGCTAGCGTCGGGTCGTCGTGCCTGTCCTTGT CCTCTTCCCCCGTCCCGTGGGAGACGATGCCTTCGGCCCTGCTGGGCACG TGGGAGCGGAGGCCGCAGACGACGGTCCCTAAGGACCGGCACAGGCTGTT CGACAACTCGGCCGCCTTCGTTCGCGCCTGCTTTCCCGCTCAGGTGGGCG TTGGTGTCCTTGTTGTTGTTGTTGCTGTTGTGGTTGTTGTTGCTGCTGCT GCTGTTTTTGTTAATGTTGTCACCAAGCACTGTTTGTTGTGCGGGTGTTC CTTCGGCTCCGGCGTGGACCATGCCCATCAGCAGGATCTGCACTGGTGTT GTGCCGTTCCCTCTAGAAAGGAGACAGTTCAATAGTCCCGGCTCTTGCCA AGCAGGGGCGATGAGAGGACAGTGGCGGGGGGTTCGTTAGTGTGTAGCCC TCAAGGATTGGCGTCCACGTGGAGCTGTGCGTTTTTTTCACGTAAAAAAT CTCCGATTACGCGCGTTCGTTCTCTCGAAACTGCCGCGTCCGTGGTTTTG ACGCGAGCAGACATGGCTGCAGCATCACATGGAAGAGGAGATGGGGCTAT CGCTTGGAGGCACGCTTTCTCGGCACGGCTGGGGCGGACCCTTCAAGGAT TTGGGTGAGACAGCGCAATCCTGTTCTGCACCGCAGGGGCGCACCAAACG GCTGCGCCGTGCGTGCAGTTTTCCCAAGCTTGCAGTTTCTGAATATTGGT GGCACGTACCCCGGGCGCATACGAAGTGTATGTAAACATTTGACATTCTC AGGACTCGTTTGGTAATCCTGGTACCACACAGGCCCGCAAGTATCCCTTC CCGAAGACCATGTGTGAACACCCACCTTGTCGCCCACATATCCCCCACGT TGATCCTTTACAACCTCTTAGCCTCTTGTAGATATGCCTAGTCTTTGACT GCATGACGGAAGGAAGGAAGCCCGCGAATGAGTGTAACCCCTCTCCCCCC CTTATGTCTCGGCAAATGTCCCGAACAACAGGACTGGATGGCGAGCACTT CAATCCCGAAATCATGCAAGCGGCTAGCTCGACGGAGCTACATAGACACA TGAGCTGGGTGATGGCCGAGTCGGGGGTTCCGTGGGAGGCGAACGATGAC GCCTGGTGCTGCCCGGAGTGCTTCATTTTGTTCTCCCTCAACGTGTTCAG GGTGAGAAAGAGCGTGATCCCGCCAAAGCGAGAAGCGGCGAGAGAGGGAT GGCGGGAGGGAGGGAGGGAGAGAACAAATACTATTAACAACCAACGAGAT ACTTATCGACGACATTCACGATGTGGTTGGAGGTTGGGATTCGCGAAGTT TCGGCTCACATATAGAGAGCAGGACCCGTCCCTCCTCAGGGAGATGCTTC GCCAGGAGGTTTGAGGGTCATCCTGCTTAGAGGACAAAGGCTGATGAAGG CAGCAGAAAGAAACCGATTGAAGTTGACACAAACTGTCGGCGAGTCCGCC GTATCATGCCACCTCGTTTCGTTCTTTTCTGGTGTGCTTTCGTCAACCCC ACGCTTTGCATTGTGACTCATGCCCCCCCGCATCCCCTCTCCTACCTCTC CCTCGCTCAGCACCACTGCCGGGGTTGCGGCCAAGTCTACTGCAGCGCCC ACGCCCCGCCCACGCCTGTACCGCCCGATGACCGACCCCTCAAGCTGTGC TGGTCGTGCGTCCTGGAAGGGGCGGTTCCTCTCCCGGCTTCCCTGCTCGA AGAGGACGACGACGACGACGACGACGACGTTTTCGACGAGAATTCAATTC TCGGTATGTCCCCGAACACTGCTCGGGGAATAGCGGCGGAGCAAGAACTC TTGTCCCCTACCGTAGCCTCGATGAACTTGGACGCCGCGACCGCAGCTGC TGCCGCCGGGGCCGCAGCTGCTGCTGCCGGGGCCGCGTACATCGCGCCGC CGCAACCGGACCCCGACTGCCTGAGCGGGCAAGCTGGCAGCGAGCGAAAG CAACGAGGGCACAGGGCGAAAGCGGGCAGCGTCGGCGGCAGTATCGAGGG AGGGCGCGGCGGCGGCGGCCGCGGCGGCGGCGGCGGCGGCGGCGACGAGG AGCGAAAGCAGCAAGGGCACCGGAAGAAAGCGGCCAGTGTCGGCGGCGGC GGTTTCCTGTCCGCCCTTGTGTCTCTGATAGAGGTCGTGGCCAGCCCTAC TTCTCCCATGCGGTCGCGCGGCGGCGGCGGCGGCGGCGGTAAGAAGCCCG ATGTGCATGCATCCGGGCGCCCACCTCAATCTCCCGCGAAGCCGCCGGCC GTCGCCGCTGAAACTCGAGGGGACGATGCCGGCGACGCCCCGGGTGTAGG AGGAGGAGGAGGAGGAGGAGAGAACTGGCGAGCGGGTTGGTCTACGCCGC CTCCCTCCGGAGAGGGTCTGGCGATAGAAGCCCAACAGCAGCCCTCGGGG GGCAGGGGCCAAGAAGCCGAGTCGTCTCCTTTGCGGCTGCGGAAGGAGTA CGACTCGGGGTCGGAAAGCCGCACCCAGTTGTCCCCACTAAGGCTACGGA AGGAGTTCGGCGGCTTCAACTCGCACTCCACGGCGGGCTCCTTGGCCGAG TCTGTCGACGACGGTTACGGAGCGAACGGGAACGCGCGCGGAGTTGTGGA TGAAGCGGCGTTGTTCGAAGAGACCCCGCCGGCGGAGCTGGGCTTCCCGA GTGAACGGCCGTGGGCCCTCGGGTTCGGGAATTAGATCAGATCACGGTTG GTTTGCCGACGACCGTGCCAACAGGATTACTGTAGAGTATTTATTCTTGT GTAACTATCACAAACCACCGCATTCGGCTATCAAGAGTGGCTTGGCTCTC TGCTGAGAGCGATGCGAAAAAACATGTGTATATTATTGTTTGGGGTGGAC ATGAATGCGGTGCTCTTTCTGTGTCTTGTCCAGTTGGTTTTCGCTCCCGT GTGAAATGAAAGTGTTGGGTGTTTTTGGCCCGCGTCGTCTCCTGTCAAGG AGTCTCGGTTTTTGACAGTAATTGTTTGCTGCTGTGTTGTATTGTAGTTG CTGCTGGTGTTGGTTCGTGTTTGTTTCATTCTTTTAGAAACGGCTCTGGC ATTGGCGTAGCGCTTCCCCTTACGTGTCCTTCTAGGCAGTGAATTTTACG GTGCCCGCAGTTTTTTTCGCGCGTTTACGAGCGCAAGCATGATGAAAATG CGATAGGTCAAAAGAACCCGG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1415:2..5122+

>mRNA_E-fasciculatus_F_contig1415.3041.1 ID=mRNA_E-fasciculatus_F_contig1415.3041.1|Name=mRNA_E-fasciculatus_F_contig1415.3041.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=4398bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1415:2..5122+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCTCGGGGTGGGCGGGGCGGACGCGAACGGGGTGGACTCGCGCCTCCT
GTCTCCACTCCACCTCGTGGCAATGTTCAACCGCCCGGACATCGCGAGGG
TGCTGCTCATGTGCGGGGCGTCTCCCCGGCTGGTCGGAGGGGTCACCCGG
GCCGCGGCGGCGCGGGGAGGGAAGCTCTGGTCCCCCTTGGAGATGGCGGA
GGAGGCGTGCACGGAAGGAGGTGCTCTGGACGATGATGCTCGGGGTGGGC
GGGGCGGACGCGAACGGGGTGGACTCGCGCCTCCTGTCTCCACTCCACCT
CGTGGCAATGTTCAACCGCCCGGACATCGCGAGGGTGCTGCTCATGTGCG
GGGCGTCTCCCCGGCTGGTCGGAGGGGTCACCCGGGCCGCGGCGGCGCGG
GGAGGGAAGCTCTGGTCCCCCTTGGAGATGGCGGAGGAGGCGTGCACGGA
AGGAGGTGCTCTGGACGATGCGAGTGTCGCGGTAGGGCCCGCGGCGCTGT
ACGTCCTTCGGGGCCTGGTGTGTCTCCAGTGCAACCTGAAGCTGCCGAGA
CCCGAGCGGTGCGGGACTTGCAAGCTCACCTTCTGCAAGTCGTGCCGCGG
CAGCCACTTCTGCCGAGTGTCGCGGTAGGGCCCGCGGCGCTGTACGTCCT
TCGGGGCCTGGTGTGTCTCCAGTGCAACCTGAAGCTGCCGAGACCCGAGC
GGTGCGGGACTTGCAAGCTCACCTTCTGCAAGTCGTGCCGCGGCAGCCAC
TTCTGCGCCGGGGGGGGGGGTAGTGGTTCGAGAAGCGCCGATTCAGGCGG
AGGTGGCGGAAGGGCTAGGCTTGAGAGCACCACGCTATGGGAGTTGGGAA
GCGCGATTGGGGACGACTGGGAAGAGCTGTTTAACGAGGCCGGGGGGGGG
GGTAGTGGTTCGAGAAGCGCCGATTCAGGCGGAGGTGGCGGAAGGGCTAG
GCTTGAGAGCACCACGCTATGGGAGTTGGGAAGCGCGATTGGGGACGACT
GGGAAGAGCTGTTTAACGAGGGAAACGCAAACGCCCGAGGTGGAGTTGCG
CGCGGAGCGGGTGTGGAGGAGGATGGCTGGAAGCCGGGGGGGCTCCGACG
GTCGGGACCCGGGACGATCACTTCGACCGAGGAGATCATGGAGGCTAGCG
TCGGGTCGTCGTGCCTGTCCTTGTCCTCTTCCCCCGTCCCGTGGGAGACG
ATGCCTTCGGCCCTGCTGGGCACGTGGGAGCGGAGGCCGCAGACGACGGT
CCCTAAGGACCGGCACAGGCTGTTCGACAACTCGGCCGCCTTCGTTCGCG
CCTGCTTTCCCGCTCAGGGAAACGCAAACGCCCGAGGTGGAGTTGCGCGC
GGAGCGGGTGTGGAGGAGGATGGCTGGAAGCCGGGGGGGCTCCGACGGTC
GGGACCCGGGACGATCACTTCGACCGAGGAGATCATGGAGGCTAGCGTCG
GGTCGTCGTGCCTGTCCTTGTCCTCTTCCCCCGTCCCGTGGGAGACGATG
CCTTCGGCCCTGCTGGGCACGTGGGAGCGGAGGCCGCAGACGACGGTCCC
TAAGGACCGGCACAGGCTGTTCGACAACTCGGCCGCCTTCGTTCGCGCCT
GCTTTCCCGCTCAGCAGACATGGCTGCAGCATCACATGGAAGAGGAGATG
GGGCTATCGCTTGGAGGCACGCTTTCTCGGCACGGCTGGGGCGGACCCTT
CAAGGATTTGGCAGACATGGCTGCAGCATCACATGGAAGAGGAGATGGGG
CTATCGCTTGGAGGCACGCTTTCTCGGCACGGCTGGGGCGGACCCTTCAA
GGATTTGGGACTGGATGGCGAGCACTTCAATCCCGAAATCATGCAAGCGG
CTAGCTCGACGGAGCTACATAGACACATGAGCTGGGTGATGGCCGAGTCG
GGGGTTCCGTGGGAGGCGAACGATGACGCCTGGTGCTGCCCGGAGTGCTT
CATTTTGTTCTCCCTCAACGTGTTCAGGGACTGGATGGCGAGCACTTCAA
TCCCGAAATCATGCAAGCGGCTAGCTCGACGGAGCTACATAGACACATGA
GCTGGGTGATGGCCGAGTCGGGGGTTCCGTGGGAGGCGAACGATGACGCC
TGGTGCTGCCCGGAGTGCTTCATTTTGTTCTCCCTCAACGTGTTCAGGCA
CCACTGCCGGGGTTGCGGCCAAGTCTACTGCAGCGCCCACGCCCCGCCCA
CGCCTGTACCGCCCGATGACCGACCCCTCAAGCTGTGCTGGTCGTGCGTC
CTGGAAGGGGCGGTTCCTCTCCCGGCTTCCCTGCTCGAAGAGGACGACGA
CGACGACGACGACGACGTTTTCGACGAGAATTCAATTCTCGGTATGTCCC
CGAACACTGCTCGGGGAATAGCGGCGGAGCAAGAACTCTTGTCCCCTACC
GTAGCCTCGATGAACTTGGACGCCGCGACCGCAGCTGCTGCCGCCGGGGC
CGCAGCTGCTGCTGCCGGGGCCGCGTACATCGCGCCGCCGCAACCGGACC
CCGACTGCCTGAGCGGGCAAGCTGGCAGCGAGCGAAAGCAACGAGGGCAC
AGGGCGAAAGCGGGCAGCGTCGGCGGCAGTATCGAGGGAGGGCGCGGCGG
CGGCGGCCGCGGCGGCGGCGGCGGCGGCGGCGACGAGGAGCGAAAGCAGC
AAGGGCACCGGAAGAAAGCGGCCAGTGTCGGCGGCGGCGGTTTCCTGTCC
GCCCTTGTGTCTCTGATAGAGGTCGTGGCCAGCCCTACTTCTCCCATGCG
GTCGCGCGGCGGCGGCGGCGGCGGCGGTAAGAAGCCCGATGTGCATGCAT
CCGGGCGCCCACCTCAATCTCCCGCGAAGCCGCCGGCCGTCGCCGCTGAA
ACTCGAGGGGACGATGCCGGCGACGCCCCGGGTGTAGGAGGAGGAGGAGG
AGGAGGAGAGAACTGGCGAGCGGGTTGGTCTACGCCGCCTCCCTCCGGAG
AGGGTCTGGCGATAGAAGCCCAACAGCAGCCCTCGGGGGGCAGGGGCCAA
GAAGCCGAGTCGTCTCCTTTGCGGCTGCGGAAGGAGTACGACTCGGGGTC
GGAAAGCCGCACCCAGTTGTCCCCACTAAGGCTACGGAAGGAGTTCGGCG
GCTTCAACTCGCACTCCACGGCGGGCTCCTTGGCCGAGTCTGTCGACGAC
GGTTACGGAGCGAACGGGAACGCGCGCGGAGTTGTGGATGAAGCGGCGTT
GTTCGAAGAGACCCCGCCGGCGGAGCTGGGCTTCCCGAGTGAACGGCCGT
GGGCCCTCGGGTTCGGGAATTAGCACCACTGCCGGGGTTGCGGCCAAGTC
TACTGCAGCGCCCACGCCCCGCCCACGCCTGTACCGCCCGATGACCGACC
CCTCAAGCTGTGCTGGTCGTGCGTCCTGGAAGGGGCGGTTCCTCTCCCGG
CTTCCCTGCTCGAAGAGGACGACGACGACGACGACGACGACGTTTTCGAC
GAGAATTCAATTCTCGGTATGTCCCCGAACACTGCTCGGGGAATAGCGGC
GGAGCAAGAACTCTTGTCCCCTACCGTAGCCTCGATGAACTTGGACGCCG
CGACCGCAGCTGCTGCCGCCGGGGCCGCAGCTGCTGCTGCCGGGGCCGCG
TACATCGCGCCGCCGCAACCGGACCCCGACTGCCTGAGCGGGCAAGCTGG
CAGCGAGCGAAAGCAACGAGGGCACAGGGCGAAAGCGGGCAGCGTCGGCG
GCAGTATCGAGGGAGGGCGCGGCGGCGGCGGCCGCGGCGGCGGCGGCGGC
GGCGGCGACGAGGAGCGAAAGCAGCAAGGGCACCGGAAGAAAGCGGCCAG
TGTCGGCGGCGGCGGTTTCCTGTCCGCCCTTGTGTCTCTGATAGAGGTCG
TGGCCAGCCCTACTTCTCCCATGCGGTCGCGCGGCGGCGGCGGCGGCGGC
GGTAAGAAGCCCGATGTGCATGCATCCGGGCGCCCACCTCAATCTCCCGC
GAAGCCGCCGGCCGTCGCCGCTGAAACTCGAGGGGACGATGCCGGCGACG
CCCCGGGTGTAGGAGGAGGAGGAGGAGGAGGAGAGAACTGGCGAGCGGGT
TGGTCTACGCCGCCTCCCTCCGGAGAGGGTCTGGCGATAGAAGCCCAACA
GCAGCCCTCGGGGGGCAGGGGCCAAGAAGCCGAGTCGTCTCCTTTGCGGC
TGCGGAAGGAGTACGACTCGGGGTCGGAAAGCCGCACCCAGTTGTCCCCA
CTAAGGCTACGGAAGGAGTTCGGCGGCTTCAACTCGCACTCCACGGCGGG
CTCCTTGGCCGAGTCTGTCGACGACGGTTACGGAGCGAACGGGAACGCGC
GCGGAGTTGTGGATGAAGCGGCGTTGTTCGAAGAGACCCCGCCGGCGGAG
CTGGGCTTCCCGAGTGAACGGCCGTGGGCCCTCGGGTTCGGGAATTAG
back to top