prot_E-fasciculatus_F_contig14105.3006.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14105.3006.1
Unique Nameprot_E-fasciculatus_F_contig14105.3006.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length210
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14105.3006.1 vs. uniprot
Match: D8LM09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM09_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 6.270e-125
Identity = 198/210 (94.29%), Postives = 202/210 (96.19%), Query Frame = 0 
Query:    1 MRSYAVAAFFLASVVESFHVSTVGRPHEFRSRSSSRAGGASLSPLRMGAPSLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAADRAGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQELYDLGAPDTSGFPAVDTDEARLIVAAFGKDGPPVAAKRLTVKGRQFPVTVELTADDLAFPLTKDAWRL 210
            MRSYAVAAFFLASVVESFHVSTVGRPHEF S  SS   GAS+SPL MGAPSLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAADRAGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQ+LYDLGAPDT+GFPAVDTD+ARLIVAAFGKDGPPVAAKRL VKGRQFPVTVELTADDLAFPLTKDAWRL
Sbjct:    1 MRSYAVAAFFLASVVESFHVSTVGRPHEFHSSRSSSRAGASVSPLLMGAPSLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAADRAGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPDTTGFPAVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRL 210
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14105.3006.1 vs. uniprot
Match: A0A836CAJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.670e-30
Identity = 59/117 (50.43%), Postives = 86/117 (73.50%), Query Frame = 0 
Query:   92 QELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQELYDLGAPDTSGFPAVDTDEARLIVAAFGKDGPPVAAKRLTVKGRQFPVTVELTADDLAFPLTKDAW 208
            ++++P + L ++ T  Q  R++ E Q+ L+ D   + G+LIARV+VSIK + + LG PD   FP +DT++ARLIV AFG+ GPPVA++R+ +KG +FP  +ELTADDLAFPLTK+ W
Sbjct:   96 EDINPVQQLAQQATAEQVTRVRAEQQEVLRRDALREPGELIARVVVSIKSDAFPLGFPDVGPFPELDTEDARLIVTAFGRSGPPVASRRVPLKGLKFPALLELTADDLAFPLTKEVW 212
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14105.3006.1 vs. uniprot
Match: A0A4D9DAT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAT9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.640e-9
Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0 
Query:  130 DLIARVLVSIKQ-ELYDLGAPDTSGFP--AVDTDEARLIVAAFGKDGPPVAAKRLTVKGRQFPVTVELTADDLAFPLTKDAWR 209
            D+IA+  V + + E Y LG P+  G    A++ D A L++  +G++G PVAAK++ ++G QFP   ELT ++L FPLTK+ W 
Sbjct:  147 DVIAKGTVRLPEIEGYPLG-PERPGVINYALENDNAALLITCYGREGGPVAAKKIQLRGLQFPYNFELTFNNLLFPLTKETWE 228
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14105.3006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM09_ECTSI6.270e-12594.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAJ8_9STRA1.670e-3050.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DAT9_9STRA2.640e-942.17Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.543

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14105contigE-fasciculatus_F_contig14105:1..2812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14105.3006.1mRNA_E-fasciculatus_F_contig14105.3006.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14105 1..2812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14105.3006.1 ID=prot_E-fasciculatus_F_contig14105.3006.1|Name=mRNA_E-fasciculatus_F_contig14105.3006.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=210bp
MRSYAVAAFFLASVVESFHVSTVGRPHEFRSRSSSRAGGASLSPLRMGAP
SLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAADRAGAQELSPAEML
VKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQELYDLGAPD
TSGFPAVDTDEARLIVAAFGKDGPPVAAKRLTVKGRQFPVTVELTADDLA
FPLTKDAWRL
back to top