mRNA_E-fasciculatus_F_contig14080.2982.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: D7G275_ECTSI (Phosphatidate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G275_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.140e-27 Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 1
Query: 25 HTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKGAAA--EGGVALPRGPVLCPPEVLF 192
H DVSTLFSKISGNGYKILYLTNRPLPDWHAK+GAAA EGGVALPRGPVLCPPEVLF
Sbjct: 1194 HKDVSTLFSKISGNGYKILYLTNRPLPDWHAKRGAAAAAEGGVALPRGPVLCPPEVLF 1251
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: A0A6H5JPH1_9PHAE (LNS2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH1_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.140e-27 Identity = 54/58 (93.10%), Postives = 55/58 (94.83%), Query Frame = 1
Query: 25 HTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKGAAA--EGGVALPRGPVLCPPEVLF 192
H DVSTLFSKISGNGYKILYLTNRPLPDWHAK+GAAA EGGVALPRGPVLCPPEVLF
Sbjct: 1454 HKDVSTLFSKISGNGYKILYLTNRPLPDWHAKRGAAAAAEGGVALPRGPVLCPPEVLF 1511
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: T0MFM9_9MICR (Smp2 protein n=1 Tax=Nosema apis BRL 01 TaxID=1037528 RepID=T0MFM9_9MICR) HSP 1 Score: 50.4 bits (119), Expect = 1.360e-5 Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 1
Query: 25 HTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKGAAA---EGGVALPRGPVLCPPEVLF 192
H +++LFSK+ +GYKI+YLT RPL + K + G LP GPV+ P+ LF
Sbjct: 400 HVGIASLFSKLYRSGYKIMYLTARPLQQSFSTKNYLTNIDQNGAKLPEGPVILSPDGLF 458
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: R0MRQ2_NOSB1 (Nuclear elongation and deformation protein 1 n=3 Tax=Opisthokonta TaxID=33154 RepID=R0MRQ2_NOSB1) HSP 1 Score: 50.4 bits (119), Expect = 1.360e-5 Identity = 27/59 (45.76%), Postives = 35/59 (59.32%), Query Frame = 1
Query: 25 HTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKG---AAAEGGVALPRGPVLCPPEVLF 192
H +++LF+KI +GYKILYLT RPL A K + G LP GPVL P+ +F
Sbjct: 415 HGGIASLFTKIKKHGYKILYLTARPLQQSFATKNYLRRVNQDGYNLPEGPVLLSPDGVF 473
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: A0A2V3III9_9FLOR (Phosphatidate phosphatase PAH2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III9_9FLOR) HSP 1 Score: 49.7 bits (117), Expect = 2.520e-5 Identity = 27/66 (40.91%), Postives = 35/66 (53.03%), Query Frame = 1
Query: 1 PTIDRCMQHTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKG---AAAEGGVALPRGPVLCPPEVL 189
P + R V+ L+S+I NGYKILYLT RP+ + + +GG LP GPVL P L
Sbjct: 238 PAVGRDWSQDGVAGLYSQIEKNGYKILYLTARPIGQASQTRAFLHSVTQGGAKLPNGPVLMSPNRL 303
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: A0A0B2UMS3_9MICR (Smp2-like plasmid maintenance protein n=1 Tax=Ordospora colligata OC4 TaxID=1354746 RepID=A0A0B2UMS3_9MICR) HSP 1 Score: 49.3 bits (116), Expect = 3.480e-5 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 25 HTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKG---AAAEGGVALPRGPVLCPPEVLF 192
H V++L++KI NGYKI+YLT RPL + K + + G LP GPV+ P+ +F
Sbjct: 418 HNGVASLYTKIVKNGYKIVYLTARPLEQSSSTKSYLKSICQDGCRLPDGPVILSPDGVF 476
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: A0A7R8W0V4_9CRUS (Phosphatidate phosphatase n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W0V4_9CRUS) HSP 1 Score: 49.3 bits (116), Expect = 3.530e-5 Identity = 27/67 (40.30%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 1 PTIDRCMQHTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKG---AAAEGGVALPRGPVLCPPEVLF 192
P I R +DV+ LF+KIS NGY+ LYL+ R + H + + +G V LP GP+L P L
Sbjct: 871 PIIGRDWSQSDVAQLFTKISRNGYRFLYLSARAIGQAHITREYLRSIRQGDVCLPNGPLLLNPASLI 937
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: A0A4W4FSU9_ELEEL (Phosphatidate phosphatase n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4FSU9_ELEEL) HSP 1 Score: 48.9 bits (115), Expect = 4.780e-5 Identity = 25/67 (37.31%), Postives = 37/67 (55.22%), Query Frame = 1
Query: 1 PTIDRCMQHTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKGA---AAEGGVALPRGPVLCPPEVLF 192
PT+ + H +++LF K+S NGYK +Y + R + + +G E G LP+GPVL P LF
Sbjct: 478 PTLGKDWTHQGITSLFHKVSQNGYKFMYCSARAIGMANMTRGYLHWVNESGTELPQGPVLLSPSSLF 544
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: M1K8X5_ENCCN (LNS2 domain-containing protein n=1 Tax=Encephalitozoon cuniculi TaxID=6035 RepID=M1K8X5_ENCCN) HSP 1 Score: 48.5 bits (114), Expect = 6.520e-5 Identity = 25/59 (42.37%), Postives = 36/59 (61.02%), Query Frame = 1
Query: 25 HTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKGA---AAEGGVALPRGPVLCPPEVLF 192
H V++L++KI+ NGYKI+YLT RPL + K + G LP GPV+ P+ +F
Sbjct: 416 HHGVASLYTKIARNGYKIVYLTARPLGQSFSTKSYLKNVCQDGYKLPDGPVILSPDGVF 474
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Match: A0A0S4J9E4_BODSA (Lipin, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4J9E4_BODSA) HSP 1 Score: 48.5 bits (114), Expect = 6.570e-5 Identity = 23/68 (33.82%), Postives = 37/68 (54.41%), Query Frame = 1
Query: 1 PTIDRCMQHTDVSTLFSKISGNGYKILYLTNRPLPDWHAKK----GAAAEGGVALPRGPVLCPPEVLF 192
P I + H + +L++K++ NGY+ +YLT R + + +GG+ LPRGPVL P+ F
Sbjct: 429 PMIGKDWTHAGICSLYTKVAKNGYEFVYLTARSMSQQEQTRKFLWSIEQDGGMTLPRGPVLTAPDRFF 496 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14080.2982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14080.2982.1 >prot_E-fasciculatus_F_contig14080.2982.1 ID=prot_E-fasciculatus_F_contig14080.2982.1|Name=mRNA_E-fasciculatus_F_contig14080.2982.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=58bp MQHTDVSTLFSKISGNGYKILYLTNRPLPDWHAKKGAAAEGGVALPRGPVback to top mRNA from alignment at E-fasciculatus_F_contig14080:424..615- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14080.2982.1 ID=mRNA_E-fasciculatus_F_contig14080.2982.1|Name=mRNA_E-fasciculatus_F_contig14080.2982.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=192bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14080:424..615- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14080:424..615- >mRNA_E-fasciculatus_F_contig14080.2982.1 ID=mRNA_E-fasciculatus_F_contig14080.2982.1|Name=mRNA_E-fasciculatus_F_contig14080.2982.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=348bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14080:424..615- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |