mRNA_E-fasciculatus_F_contig14030.2958.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: D7FSF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF0_ECTSI) HSP 1 Score: 121 bits (304), Expect = 6.290e-32 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWANDK 189
AQQLDDMISEAEQVATELYGE+QSPQDMQDRAWKD TVSVFDLENMEEDGK+RGE+MPWANDK
Sbjct: 258 AQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGKLRGEDMPWANDK 320
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A836CLR4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR4_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 5.390e-17 Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWANDK 189
A ++D +IS AE+VAT LYGE+ SP+D QDRAW++ SV+DLE +E D +RGEEMPWANDK
Sbjct: 257 ADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDK 319
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A7S2HQV3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQV3_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.090e-12 Identity = 27/55 (49.09%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 22 ISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWAND 186
++EAEQV+T +YGE+ + ++ QDR WKD T+S++DLE +E+ +++GE+MPW D
Sbjct: 463 VAEAEQVSTSIYGESMTAEEQQDRMWKDGTISIWDLETLEQQAEIQGEQMPWHQD 517
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A7S2VDW2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VDW2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.040e-11 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWAN 183
A ++ + SEAE VAT +YG+ S Q+ QDRAWK+ T S+FDLE ME + + GE+ PWAN
Sbjct: 437 ASRIKKLASEAEVVATRIYGKPMSLQEQQDRAWKEQTTSIFDLERMEIEAERMGEQAPWAN 497
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A448Z1Y6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z1Y6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 3.640e-11 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWANDK 189
A ++ + SEAE VAT +YG+ S +D QDR WK+ T S+F+LE ME + + GE+ PWA+DK
Sbjct: 444 ASRIKQIASEAEVVATRIYGQGMSLRDQQDRMWKEQTTSIFELEQMELEAEANGEKAPWASDK 506
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A7R9ZKR3_9STRA (Hypothetical protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 6.700e-11 Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWAN 183
A ++ + SEAE VAT +YG+ S ++ QDR W+D T S+FDLE ME + + RGE PW N
Sbjct: 141 ASRIKQIASEAEVVATRIYGQGMSLREQQDRMWEDETTSIFDLEKMELEAEARGENAPWTN 201
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: K0TLD5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLD5_THAOC) HSP 1 Score: 65.5 bits (158), Expect = 6.770e-11 Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 7 QLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWAND 186
Q+ + SEAE VAT +YG+ + ++ QDRAWK+ T S+FDLE +E + + RGE PWA D
Sbjct: 406 QIKQIASEAEVVATRIYGKGMTQREQQDRAWKEQTTSIFDLETLEIEAERRGETAPWATD 465
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A7S3V6E7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6E7_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 6.790e-11 Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWAND 186
A ++ + +EAE VAT +YG+ + ++ QDRAWK+ T S+FDLE +E D + RGE PWAN+
Sbjct: 439 ASRIKQIANEAEVVATRIYGKGMTLREQQDRAWKEQTTSIFDLETLEIDAERRGETAPWANE 500
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A1Z5JLU1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLU1_FISSO) HSP 1 Score: 63.9 bits (154), Expect = 2.370e-10 Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWAN 183
A ++ + SEAE VAT +YG+ S ++ QDR WKD T S+FDLE ME + + GE PW+N
Sbjct: 435 ASRIKKLASEAEVVATRIYGQGMSVREYQDRVWKDQTTSIFDLERMEIEAERNGEVAPWSN 495
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Match: A0A6U1M7L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M7L3_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 5.980e-10 Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 1 AQQLDDMISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEMPWAND 186
A +L + EAE VAT +YGE+ + ++ QD+ W + T+SVFDLE +E + +GE MPW ND
Sbjct: 341 ADRLRKITDEAEGVATSIYGESMTAREQQDKMWNEGTISVFDLEKIENAAEAQGEAMPWKND 402 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14030.2958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14030.2958.1 >prot_E-fasciculatus_F_contig14030.2958.1 ID=prot_E-fasciculatus_F_contig14030.2958.1|Name=mRNA_E-fasciculatus_F_contig14030.2958.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=58bp MISEAEQVATELYGETQSPQDMQDRAWKDTTVSVFDLENMEEDGKMRGEEback to top mRNA from alignment at E-fasciculatus_F_contig14030:2803..3292- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14030.2958.1 ID=mRNA_E-fasciculatus_F_contig14030.2958.1|Name=mRNA_E-fasciculatus_F_contig14030.2958.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=490bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14030:2803..3292- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14030:2803..3292- >mRNA_E-fasciculatus_F_contig14030.2958.1 ID=mRNA_E-fasciculatus_F_contig14030.2958.1|Name=mRNA_E-fasciculatus_F_contig14030.2958.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=348bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14030:2803..3292- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |