mRNA_E-fasciculatus_F_contig1401.2941.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: D8LF11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF11_ECTSI) HSP 1 Score: 450 bits (1157), Expect = 1.130e-154 Identity = 267/301 (88.70%), Postives = 273/301 (90.70%), Query Frame = 2
Query: 101 MVTAMVALQRGAGAFQRGLRQQHSRPRGSARLSQQAPRARACNTNTTVSVASFGSRSSPTAGCWSAGVSVHRNDPLRPLVLPVVPAAVALRSVQHLSSKSRGGRE-RGGADKRRXXXXXXXXXXXXXXXXXKEEYTFLEKDDLGRLSSESKGGLKTDTAAARGAEDEQVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQENPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKTKS 1000
MV AMVAL+RGAG FQRGLRQQ SRPRGSA LSQQA RACNT VSVASFGSRSSPTAG WSA VSVHRN+ LRPLV PVVP AVALRSVQHLSS RGGRE RGGADKRR XXXXXXXXXXXXX EYTFLEKDDLGRLS+E K GLKTDTAAARGAE E+VDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQ+NPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPK K+
Sbjct: 1 MVMAMVALRRGAGVFQRGLRQQ-SRPRGSACLSQQAKVPRACNT--AVSVASFGSRSSPTAGRWSACVSVHRNEDLRPLVSPVVPVAVALRSVQHLSSSGRGGREKRGGADKRRRSNTXXXXXXXXXXXXX-XEYTFLEKDDLGRLSNEPKSGLKTDTAAARGAE-EKVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQDNPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKAKT 296
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: A0A8K1C653_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C653_PYTOL) HSP 1 Score: 64.7 bits (156), Expect = 3.260e-8 Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 2
Query: 569 TAAARGAEDEQVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAI----QVLADY-IGAQENPSVTWLQNT--------IKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKTKS*K 1006
T++A A + + ++ K +K+K LW+QYG+V +GTY +YF L IYV ++ G V++ TS + + AD+ + N VTW ++ + N K + + A + + E R V +A TP IAR +GRAP K+ K
Sbjct: 67 TSSANEAVKKTAGERRQEMVEKGKSGWSKLKELWRQYGMVAVGTYFSMYFTVLGSIYVAIEQGWVSTK-RTSRSEGENGEANADFNVVTATNKVVTWAEDMGIAKHLDLQRVNAKTGSFVIAWVATKFTEPLRLAVTLAITPRIARLVGRAPKLPKAPK 224
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: M4BYX8_HYAAE (DUF1279 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYX8_HYAAE) HSP 1 Score: 62.4 bits (150), Expect = 2.430e-7 Identity = 43/139 (30.94%), Postives = 64/139 (46.04%), Query Frame = 2
Query: 653 KMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDV----------DTSHAIQVLADYIGAQENPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAP---PKTKS*KGFMVHSRQ 1030
++K LW++YG V +GTY LY L IY+ +D G V +D + + ++ E+ + + N K + L A I + E R + +AATP IAR LGRAP PKT M+ +Q
Sbjct: 92 RLKDLWRKYGAVAMGTYFSLYGAVLGSIYLAIDQGWVHTDTGRNSNDKPSDENFDLVSTTNKFVKWAEDLGIAQYLEVERVNAKTGSFLLAWIATKFTEPLRLALTVAATPRIARFLGRAPKLPPKTTGKLASMMQKQQ 230
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: D7FNZ5_ECTSI (DUF1279 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ5_ECTSI) HSP 1 Score: 58.9 bits (141), Expect = 1.180e-5 Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = 2
Query: 638 KQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQENPSVTWLQN-------TIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPK 991
K++ +++ LW++YG V IGTY +YFG +A Y + D G++ S A+ +++ + W Q + + +A + + A +++E R + AIA TP +ARALGRAP K
Sbjct: 324 KESSNRLQDLWRKYGAVGIGTYFGIYFGSIAVFYGIYDYGVLTSLPSGGTAV---IEHMQEWMKSAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAK 445 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1401.2941.1 >prot_E-fasciculatus_F_contig1401.2941.1 ID=prot_E-fasciculatus_F_contig1401.2941.1|Name=mRNA_E-fasciculatus_F_contig1401.2941.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=301bp MVTAMVALQRGAGAFQRGLRQQHSRPRGSARLSQQAPRARACNTNTTVSVback to top mRNA from alignment at E-fasciculatus_F_contig1401:2020..5110- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1401.2941.1 ID=mRNA_E-fasciculatus_F_contig1401.2941.1|Name=mRNA_E-fasciculatus_F_contig1401.2941.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3091bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1401:2020..5110- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1401:2020..5110- >mRNA_E-fasciculatus_F_contig1401.2941.1 ID=mRNA_E-fasciculatus_F_contig1401.2941.1|Name=mRNA_E-fasciculatus_F_contig1401.2941.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1806bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1401:2020..5110- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |