prot_E-fasciculatus_F_contig1401.2941.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1401.2941.1
Unique Nameprot_E-fasciculatus_F_contig1401.2941.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length301
Homology
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: D8LF11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF11_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 1.960e-156
Identity = 267/301 (88.70%), Postives = 273/301 (90.70%), Query Frame = 0
Query:    1 MVTAMVALQRGAGAFQRGLRQQHSRPRGSARLSQQAPRARACNTNTTVSVASFGSRSSPTAGCWSAGVSVHRNDPLRPLVLPVVPAAVALRSVQHLSSKSRGGRE-RGGADKRRXXXXXXXXXXXXXXXXXKEEYTFLEKDDLGRLSSESKGGLKTDTAAARGAEDEQVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQENPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKTKS 300
            MV AMVAL+RGAG FQRGLRQQ SRPRGSA LSQQA   RACNT   VSVASFGSRSSPTAG WSA VSVHRN+ LRPLV PVVP AVALRSVQHLSS  RGGRE RGGADKRR    XXXXXXXXXXXXX  EYTFLEKDDLGRLS+E K GLKTDTAAARGAE E+VDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQ+NPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPK K+
Sbjct:    1 MVMAMVALRRGAGVFQRGLRQQ-SRPRGSACLSQQAKVPRACNT--AVSVASFGSRSSPTAGRWSACVSVHRNEDLRPLVSPVVPVAVALRSVQHLSSSGRGGREKRGGADKRRRSNTXXXXXXXXXXXXX-XEYTFLEKDDLGRLSNEPKSGLKTDTAAARGAE-EKVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQDNPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKAKT 296          
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: A0A8K1C653_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C653_PYTOL)

HSP 1 Score: 62.8 bits (151), Expect = 6.090e-8
Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = 0
Query:  157 TAAARGAEDEQVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAI----QVLADY-IGAQENPSVTWLQNT--------IKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKTKS 300
            T++A  A  +        + ++ K   +K+K LW+QYG+V +GTY  +YF  L  IYV ++ G V++   TS +     +  AD+ +    N  VTW ++          + N K  + + A +  +  E  R  V +A TP IAR +GRAP   K+
Sbjct:   67 TSSANEAVKKTAGERRQEMVEKGKSGWSKLKELWRQYGMVAVGTYFSMYFTVLGSIYVAIEQGWVSTK-RTSRSEGENGEANADFNVVTATNKVVTWAEDMGIAKHLDLQRVNAKTGSFVIAWVATKFTEPLRLAVTLAITPRIARLVGRAPKLPKA 222          
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: M4BYX8_HYAAE (DUF1279 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYX8_HYAAE)

HSP 1 Score: 58.5 bits (140), Expect = 2.090e-6
Identity = 41/127 (32.28%), Postives = 60/127 (47.24%), Query Frame = 0
Query:  185 KMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDV----------DTSHAIQVLADYIGAQENPSVTWLQNTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAP---PKT 298
            ++K LW++YG V +GTY  LY   L  IY+ +D G V +D           +    +     ++   E+  +       + N K  + L A I  +  E  R  + +AATP IAR LGRAP   PKT
Sbjct:   92 RLKDLWRKYGAVAMGTYFSLYGAVLGSIYLAIDQGWVHTDTGRNSNDKPSDENFDLVSTTNKFVKWAEDLGIAQYLEVERVNAKTGSFLLAWIATKFTEPLRLALTVAATPRIARFLGRAPKLPPKT 218          
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Match: D7FNZ5_ECTSI (DUF1279 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ5_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 1.260e-5
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = 0
Query:  180 KQARAKMKLLWKQYGLVWIGTYTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQENPSVTWLQN-------TIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPK 297
            K++  +++ LW++YG V IGTY  +YFG +A  Y + D G++ S      A+    +++      +  W Q         +  + +A + + A    +++E  R + AIA TP +ARALGRAP K
Sbjct:  324 KESSNRLQDLWRKYGAVGIGTYFGIYFGSIAVFYGIYDYGVLTSLPSGGTAV---IEHMQEWMKSAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAK 445          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1401.2941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LF11_ECTSI1.960e-15688.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1C653_PYTOL6.090e-830.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BYX8_HYAAE2.090e-632.28DUF1279 domain-containing protein n=1 Tax=Hyaloper... [more]
D7FNZ5_ECTSI1.260e-531.20DUF1279 domain-containing protein n=1 Tax=Ectocarp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..216
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 217..300
NoneNo IPR availableTMHMMTMhelixcoord: 193..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1401contigE-fasciculatus_F_contig1401:2445..5010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1401.2941.1mRNA_E-fasciculatus_F_contig1401.2941.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1401 2020..5110 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1401.2941.1 ID=prot_E-fasciculatus_F_contig1401.2941.1|Name=mRNA_E-fasciculatus_F_contig1401.2941.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=301bp
MVTAMVALQRGAGAFQRGLRQQHSRPRGSARLSQQAPRARACNTNTTVSV
ASFGSRSSPTAGCWSAGVSVHRNDPLRPLVLPVVPAAVALRSVQHLSSKS
RGGRERGGADKRRRSNNNNNSREGEEREKEKEEYTFLEKDDLGRLSSESK
GGLKTDTAAARGAEDEQVDATNVTLWQRWKQARAKMKLLWKQYGLVWIGT
YTVLYFGGLAGIYVVLDTGLVASDVDTSHAIQVLADYIGAQENPSVTWLQ
NTIKTNPKANTLLKAVIVNELIEYPRDIVAIAATPSIARALGRAPPKTKS
*
back to top