prot_E-fasciculatus_F_contig1400.2938.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1400.2938.1
Unique Nameprot_E-fasciculatus_F_contig1400.2938.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length480
Homology
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 741 bits (1912), Expect = 1.940e-266
Identity = 400/481 (83.16%), Postives = 420/481 (87.32%), Query Frame = 0
Query:    1 METRNPPGLYVDPPAFDIELEEFGTLPLRRLEAVRLLREGPTTP--VSEASSAQKALTADARLLLLHGHGDRPSEVKHHRADLASHFILKLACCGGKGGEVQPETEASTRDDRSSRCEEVDRRSSRREWFVRAERDLFEARLHWHLRQNEGGGSKKGIAARGTGGTSSADLGTRASNADRSEALRLFYNLEWLQPVGPAAPGYSRVEKKRENGQERPYTSEGGGANSADGRXXXXXXXXXXXXXXAGRRRQDGDDPFREHSRSSTPGACSSGDASHVTLERPLPPSSKRKMLPQSFAVKGGGDIRYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVAITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARKRNQLSAL 479
            MET  PPGLYVDPP FDIELEEFGTLP+RRLEAVRLLREG TTP  V EAS AQKALTADARLLLLHGHGDRPSE K+ RADLASHFILKLACCG  GG VQP TEAS RDD S RCEEVDRRSSRREWFVRAERDLFEARLHWHL+QNEGGGSK+GIA R  GG SSADLG RAS ADR EALR+FYNLEWLQPVGPAAP  SR+EK+RE+G E  +  EG   +S  G+  XXXXXXXXXXXX      DGDDPFREHSRS +PGACS GDASHVTLER LPPSS+RK LP+S A KGG DI Y+SCPFEK+LPLVRSRRVLLRDGKALLSP Q+PEAVVQHFEGRLREG+A+AERGLPGVEADVRVAEVLRQVR AVDSLVSGG R G DADNRS   ITRKNIDQLAEK+FPLCMRRTLRILRREHHLKYQARLQLISFL NAGMEVDEILGLWREEFPKGMPADEYARKRNQLSAL
Sbjct:    1 METCKPPGLYVDPPDFDIELEEFGTLPMRRLEAVRLLREGQTTPAQVPEASPAQKALTADARLLLLHGHGDRPSEAKNQRADLASHFILKLACCGATGGGVQPGTEASKRDDSSGRCEEVDRRSSRREWFVRAERDLFEARLHWHLQQNEGGGSKEGIAGRCNGGASSADLGARASIADRLEALRIFYNLEWLQPVGPAAPDCSRMEKQRESGHEGSHAREGVCTSSYGGKGCXXXXXXXXXXXXXXXXXXDGDDPFREHSRSYSPGACSRGDASHVTLERQLPPSSERKKLPESVAFKGGSDIGYLSCPFEKVLPLVRSRRVLLRDGKALLSPDQLPEAVVQHFEGRLREGLAIAERGLPGVEADVRVAEVLRQVRSAVDSLVSGGGRRGLDADNRSMAIITRKNIDQLAEKHFPLCMRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQLSAL 481          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 101 bits (251), Expect = 2.960e-19
Identity = 59/173 (34.10%), Postives = 88/173 (50.87%), Query Frame = 0
Query:  303 RYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRS---TVAITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 472
            ++   PF ++L L+++R+V L  G A +    +   VV  +   L   +AV  R LP +E D R+  +L  + +            G D  N+    T  IT   ID L++  FPLCMR     LR+ HHLKY  RLQ   FL   G+ +D+ L  WREEF K M +D++ ++
Sbjct:  190 KFYKVPFTEVLDLIKNRKVYLERGLAYIPEEDLVVTVVSAYRAHLSHALAVTSRALPQLEEDTRLISMLSTLHQRYI---------GTDYSNKKASFTGEITPDQIDNLSKVAFPLCMRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFDKQ 353          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A3Q2Q406_FUNHE (DNA primase large subunit n=3 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2Q406_FUNHE)

HSP 1 Score: 99.4 bits (246), Expect = 1.200e-18
Identity = 61/187 (32.62%), Postives = 100/187 (53.48%), Query Frame = 0
Query:  286 KRKMLPQSFAVKGGG-DIRYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVA-ITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKG-MPADEY 469
            K ++L  S  V G   +  +   PF+  L LVR+R+V L++G A +   ++   V+  F  RL + +A+  R LP V +D R+  +L  +  +           G+D   +  V  I+ + ID LA K+FPLCMR+  + LR  HHL+Y  R+Q   FL   G+ +++ L  W+ EF +G + AD++
Sbjct:  159 KNELLNSSHGVSGVSLEHDFYKVPFQDALDLVRTRKVYLKEGYAYIPQSEIVAIVLNDFRTRLSKALALTARSLPAVHSDERLQPLLNHLSHSY---------FGQDYSGQKNVGKISLEQIDSLAGKSFPLCMRQLHKALRENHHLRYGGRMQYGLFLKGIGLSLEQALQFWKMEFIQGKVDADKF 336          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A3Q2DE49_CYPVA (DNA primase large subunit n=3 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2DE49_CYPVA)

HSP 1 Score: 98.2 bits (243), Expect = 2.890e-18
Identity = 63/188 (33.51%), Postives = 100/188 (53.19%), Query Frame = 0
Query:  286 KRKMLPQSFAVKGGG--DIRYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVA-ITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKG-MPADEY 469
            K K+L  S+ V G    +  +   PF+  L LVR+R+V L+DG A +    +   V+  F  RL + +A+  R LP V +D R+  +L  +  +           G+D   +  V  I+ + ID LA K+FPLCMR+  + LR  HHL++  R+Q   FL   G+ +++ L  WR EF +G + AD++
Sbjct:  158 KEKLLNSSYIVSGVTLENEDFYKVPFQDALDLVRARKVYLKDGYAFIPHNDIVTIVLNDFRTRLSKALALTARSLPAVHSDERLQPLLNHLSHSY---------LGQDYSIQKNVGKISLEQIDSLAGKSFPLCMRQLHQALRENHHLRHGGRMQYGLFLKGIGLSLEQALQFWRMEFIRGKVDADKF 336          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A4Y2B4J4_ARAVE (DNA primase large subunit n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B4J4_ARAVE)

HSP 1 Score: 96.7 bits (239), Expect = 9.640e-18
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 0
Query:  303 RYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVAI---TRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 472
            ++   PF ++L LV++R+V L  G A +    +   V+  +   L   +A+  R LP +E D R+  +L  + +            G D  N+    I   T   ID L++ +FPLCMR     LR+ HHLKY  RLQ   FL   G+ +D+ L  WREEF K M  D++ ++
Sbjct:  189 KFYKVPFIEVLDLVKNRKVFLEKGYAYIPEDDLVITVLSAYRAHLSHALAITSRALPQLEEDTRLISMLSTLHQRYI---------GTDYTNKKPNFIGDVTPDQIDSLSKTSFPLCMRNLHDTLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDVDKFDKQ 352          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A0S7IPF4_9TELE (DNA primase large subunit (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IPF4_9TELE)

HSP 1 Score: 94.7 bits (234), Expect = 1.030e-17
Identity = 56/164 (34.15%), Postives = 92/164 (56.10%), Query Frame = 0
Query:  308 PFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVA-ITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKG-MPADEY 469
            PF+  L LVR+R+V L++G A +   ++   V+  F  RL + +A+  R LP V +D R+  +L  +  +           G+D   +  V  I+ + ID LA K+FPLCMR+  + LR +HHL++  R+Q   FL   G+ +++ L  WR EF +G + AD++
Sbjct:   19 PFQDALDLVRTRKVYLKEGYAYIPQYEIVTIVLNDFRTRLSKALALTARTLPAVHSDERLQPLLNHLSHSY---------LGQDYSVQKNVGKISLEQIDSLAGKSFPLCMRQLHQALRDQHHLRHGGRMQYGLFLKGIGLSLEQALQFWRMEFTRGKVEADKF 173          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: UPI001FAD3DAF (DNA primase large subunit isoform X1 n=3 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAD3DAF)

HSP 1 Score: 96.3 bits (238), Expect = 1.360e-17
Identity = 61/188 (32.45%), Postives = 101/188 (53.72%), Query Frame = 0
Query:  286 KRKMLPQSFAVKGGG--DIRYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVA-ITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKG-MPADEY 469
            K K+L  S+ + G    +  +   PF+  L LVR+R+V L++G A +   ++   V+  F  RL + +A+  R LP V +D R+  +L  +  +           G+D   +  V  I+ + ID LA K+FPLCMR+  + LR  HHL++  R+Q   FL   G+ +++ L  WR EF +G + AD++
Sbjct:  184 KEKLLISSYGINGVTLEEQDFYKVPFQDALDLVRTRKVYLKEGYAYIPHNEIVAIVLNDFRTRLSKALALTARSLPAVHSDERLQPLLNHLSHSY---------LGQDYSVQKNVGKISLEQIDSLAGKSFPLCMRQLHQALRDNHHLRHGGRMQYGLFLKGIGLSLEQALQFWRMEFIRGKVDADKF 362          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A8H7Y5P3_PSICU (DNA primase large subunit n=1 Tax=Psilocybe cubensis TaxID=181762 RepID=A0A8H7Y5P3_PSICU)

HSP 1 Score: 95.9 bits (237), Expect = 1.400e-17
Identity = 54/170 (31.76%), Postives = 88/170 (51.76%), Query Frame = 0
Query:  303 RYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVAITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 472
            +Y    + ++  LV  R+V+L+ G A +   ++   V Q FE RL + +    R LP ++ D R+  +L  + +   S +S  W +     N   +    + ID LA+K+FPLCMR     L+R+HHLKY  R Q   FL   G+ ++E +  WR+ F  G   D++ +K
Sbjct:  175 KYYKVKWTRVPDLVEKRKVVLKGGWAYVPSRELSSIVFQEFEVRLEKALETTARLLPRLDEDTRIVPILDNLSQGFLSGISSDWANNSGQTNSDELKA--EQIDDLAKKHFPLCMRTLHSTLQRDHHLKYAGRQQYGLFLKVLGLSIEESVAFWRKSF-SGFTDDQFNKK 341          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A2R5GF95_9STRA (DNA primase large subunit n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GF95_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.510e-17
Identity = 60/178 (33.71%), Postives = 95/178 (53.37%), Query Frame = 0
Query:  296 VKGGGDIRYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVAITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKG-MPADEYARK 472
            VK    ++Y   PF ++L LV  R V L  G A +    +   +   F   + + +AVA + LP V  + R+  +L+++  A     S G  +G  AD   + ++T +NID+LA ++FPLCMR     ++REHHLK+  RLQ   FL  AG+ + + L  +  EF K  M  +E+ +K
Sbjct:  192 VKAFDRVQYFKVPFTEVLDLVSKRAVYLHRGIAFVPETDLVSILSSRFRAAMSQKLAVAYKSLPYVRQEERIRPILKKLENAYLG-PSYGLGNGNGADG--SASLTLENIDELAPRSFPLCMRNCHAHIKREHHLKHFGRLQFQLFLKGAGLTMQDCLNFFAREFTKKPMSHEEFNKK 366          
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Match: A0A8K1FD44_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD44_PYTOL)

HSP 1 Score: 95.1 bits (235), Expect = 1.970e-17
Identity = 62/176 (35.23%), Postives = 91/176 (51.70%), Query Frame = 0
Query:  300 GDIRYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREGIAVAERGLPGVEADV-RVAEVLRQVRRAVDSLVSGGWRHGRDA--DNRSTVAITRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVDEILGLWREEFPKGMPADEYARK 472
            G  RY   PF +   LV  R VLL +G A ++   + E  V HF+  LR  +    R LP  +AD+ R++  L ++     SL      H   +    ++ + +T +NIDQ+AEK+FPLCM+   R  R  HHLKY  R+Q   FL   G  V E +  +R+EF K +P   + R+
Sbjct:  142 GSSRYFRVPFHEAARLVARRHVLLVNGFAWINENALKEIAVHHFKQILRAQLTALRRSLPAKKADMERLSPTLDKLLAESQSL------HPARSILQPKNQLRVTPENIDQVAEKHFPLCMKHLHRKFRANHHLKYDGRVQYRMFLKGLGFSVHESMMFFRDEFTKVLPQVRFDRE 311          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1400.2938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU99_ECTSI1.940e-26683.16Similar to DNA primase large subunit, partial n=2 ... [more]
A0A2L2YIM2_PARTP2.960e-1934.10DNA primase large subunit n=2 Tax=Parasteatoda tep... [more]
A0A3Q2Q406_FUNHE1.200e-1832.62DNA primase large subunit n=3 Tax=Fundulus heteroc... [more]
A0A3Q2DE49_CYPVA2.890e-1833.51DNA primase large subunit n=3 Tax=Cyprinodon TaxID... [more]
A0A4Y2B4J4_ARAVE9.640e-1832.95DNA primase large subunit n=1 Tax=Araneus ventrico... [more]
A0A0S7IPF4_9TELE1.030e-1734.15DNA primase large subunit (Fragment) n=1 Tax=Poeci... [more]
UPI001FAD3DAF1.360e-1732.45DNA primase large subunit isoform X1 n=3 Tax=Girar... [more]
A0A8H7Y5P3_PSICU1.400e-1731.76DNA primase large subunit n=1 Tax=Psilocybe cubens... [more]
A0A2R5GF95_9STRA1.510e-1733.71DNA primase large subunit n=1 Tax=Hondaea fermenta... [more]
A0A8K1FD44_PYTOL1.970e-1735.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 305..470
e-value: 5.8E-29
score: 101.3
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 303..472
coord: 9..141
NoneNo IPR availableGENE3D1.20.930.80coord: 2..150
e-value: 4.1E-14
score: 54.5
coord: 282..374
e-value: 3.2E-11
score: 45.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1400contigE-fasciculatus_F_contig1400:10369..12606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1400.2938.1mRNA_E-fasciculatus_F_contig1400.2938.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1400 10265..13378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1400.2938.1 ID=prot_E-fasciculatus_F_contig1400.2938.1|Name=mRNA_E-fasciculatus_F_contig1400.2938.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=480bp
METRNPPGLYVDPPAFDIELEEFGTLPLRRLEAVRLLREGPTTPVSEASS
AQKALTADARLLLLHGHGDRPSEVKHHRADLASHFILKLACCGGKGGEVQ
PETEASTRDDRSSRCEEVDRRSSRREWFVRAERDLFEARLHWHLRQNEGG
GSKKGIAARGTGGTSSADLGTRASNADRSEALRLFYNLEWLQPVGPAAPG
YSRVEKKRENGQERPYTSEGGGANSADGRGRGGGGGSGSGGGSAGRRRQD
GDDPFREHSRSSTPGACSSGDASHVTLERPLPPSSKRKMLPQSFAVKGGG
DIRYVSCPFEKILPLVRSRRVLLRDGKALLSPVQVPEAVVQHFEGRLREG
IAVAERGLPGVEADVRVAEVLRQVRRAVDSLVSGGWRHGRDADNRSTVAI
TRKNIDQLAEKNFPLCMRRTLRILRREHHLKYQARLQLISFLGNAGMEVD
EILGLWREEFPKGMPADEYARKRNQLSAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc