prot_E-fasciculatus_F_contig1399.2919.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1399.2919.1
Unique Nameprot_E-fasciculatus_F_contig1399.2919.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length101
Homology
BLAST of mRNA_E-fasciculatus_F_contig1399.2919.1 vs. uniprot
Match: A0A6H5JEP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP0_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 5.770e-51
Identity = 89/101 (88.12%), Postives = 94/101 (93.07%), Query Frame = 0
Query:    1 MEKNKKRRAAAPLKALVANLFLVINASTNLLHVAHASTSLPSSSSEACVDETAACYDSALCWDCVAQFAEDGADSCGERYPAMTNSGASDCDVASALFCCS 101
            ME+N KRRAAAPLKA VA++FLVINAST LLHV H STSLPSSSSEACV+E AACYDSALCWDCVAQFAEDG DSCGERYPAM+NSGASDCDVASALFCCS
Sbjct:    1 MEENNKRRAAAPLKARVASIFLVINASTILLHVGHGSTSLPSSSSEACVEEAAACYDSALCWDCVAQFAEDGVDSCGERYPAMSNSGASDCDVASALFCCS 101          
BLAST of mRNA_E-fasciculatus_F_contig1399.2919.1 vs. uniprot
Match: A0A6H5L2W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W4_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 8.020e-18
Identity = 52/96 (54.17%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    6 KRRAAAPLKALVANLFLVINASTNLLHVAHASTSLPSSSSEACVDETAACYDSALCWDCVAQFAEDGADSCGERYPAMTNSGASDCDVASALFCCS 101
            K   A PL+  +  L LV  A T   H+A ASTSLPSSS E C DETAACY+S LCWDCVAQF ED ++ C +RYP +       C+ A+AL+CCS
Sbjct:   45 KNTRATPLRFALPLLLLV--ADTLRPHLASASTSLPSSS-ELCPDETAACYESTLCWDCVAQF-EDSSEYCEDRYPVLAAEDDDGCEAATALYCCS 136          
BLAST of mRNA_E-fasciculatus_F_contig1399.2919.1 vs. uniprot
Match: D8LS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS79_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 2.290e-17
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0
Query:    6 KRRAAAPLKALVANLFLVINASTNLLHVAHASTSLPSSSSEACVDETAACYDSALCWDCVAQFAEDGADSCGERYPAMTNSGASDCDVASALFCCS 101
            K+  A PL+  +  L LV +A     H+A AST+LPSSS E C DETAACY+S LCWDCVAQF ED ++ C +R+P +       C+ ASAL+CCS
Sbjct:   15 KKARATPLRFALPLLLLVADALRP--HLASASTTLPSSS-ELCPDETAACYESTLCWDCVAQF-EDSSEYCEDRFPVLAAEDDDGCEAASALYCCS 106          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1399.2919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JEP0_9PHAE5.770e-5188.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2W4_9PHAE8.020e-1854.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS79_ECTSI2.290e-1752.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..101
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1399contigE-fasciculatus_F_contig1399:3245..3547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1399.2919.1mRNA_E-fasciculatus_F_contig1399.2919.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1399 3245..5462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1399.2919.1 ID=prot_E-fasciculatus_F_contig1399.2919.1|Name=mRNA_E-fasciculatus_F_contig1399.2919.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=101bp
MEKNKKRRAAAPLKALVANLFLVINASTNLLHVAHASTSLPSSSSEACVD
ETAACYDSALCWDCVAQFAEDGADSCGERYPAMTNSGASDCDVASALFCC
S
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