mRNA_E-fasciculatus_F_contig13856.2840.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: A0A6H5KP19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP19_9PHAE) HSP 1 Score: 202 bits (513), Expect = 6.720e-61 Identity = 98/101 (97.03%), Postives = 101/101 (100.00%), Query Frame = 3
Query: 372 MDRTRAAVQLIAIARATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
MDRTRAAVQLIA+ARATAT+IHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPG+CIPLHDHPDM
Sbjct: 1 MDRTRAAVQLIAVARATATSIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGSCIPLHDHPDM 101
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: D8LBN7_ECTSI (Protein C10orf22, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN7_ECTSI) HSP 1 Score: 153 bits (386), Expect = 1.080e-44 Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 3
Query: 456 MTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
MTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGAC+PLHDHPDM
Sbjct: 1 MTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACMPLHDHPDM 73
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: W7TJB2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJB2_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.360e-11 Identity = 43/124 (34.68%), Postives = 59/124 (47.58%), Query Frame = 3
Query: 303 ERCERLCPQKARDVGSAGGRRIPMDRTRAAVQLIAIARATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
E R+ ++ D G GG R + R RA P M + PI++ + + LGM+ HP++ PP+ EI YL + +E F +GVFVLPP A IPLHDHP M
Sbjct: 116 EELNRISRKEEGDKGGWGGGRRRLGRRRA------------------PAFAMGMTQVAPIQKILDQIELHHLGMIAPVHPHLQPPTSRPSEIHYLCLLEEEDFHVGVFVLPPEARIPLHDHPGM 221
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: A0A8K1FI05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FI05_PYTOL) HSP 1 Score: 68.6 bits (166), Expect = 3.830e-10 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 3
Query: 456 MTPEDIQPIEQAMAMLTPEALGM-VPYAHPYISPPSILS-------GEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
+TPE+I+PI+ L PE + VP A + S +RY HI ++ATFS+G+FVLPPGA IPLHDHP+M
Sbjct: 77 LTPEEIEPIKALCDQLLPEHFQLKVPEAQGKNGTSTATSPRSRPRRNRVRYQHIWEDATFSMGIFVLPPGASIPLHDHPEM 157
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: A0A1W0A2F7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2F7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.180e-9 Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 3
Query: 414 RATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGM-VPYAHPYISPPSILSGE--IRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
RA + S G +T E+I+PI++ + P +G+ VP A + G IRY+HI ++A SIG+FVLPPGA IPLH+HP+M
Sbjct: 9 RAVVHAVRSVRGRALTIEEIEPIKELCESILPVHVGLEVPTA---ATAKDAFKGSKAIRYIHIYEDAQVSIGIFVLPPGASIPLHNHPEM 95
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: A0A835YIT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIT4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.650e-9 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 3
Query: 468 DIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSG-EIRYLHIAQ-EATFSIGVFVLPPGACIPLHDHPDM 674
DI + +A+ +T E LG+ P H + P ++ S +IRYLH+ + E +SIG+F+LPPGA +PLHDHP M
Sbjct: 312 DIAAVTRALEAITAEDLGLKPMGHMMVVPRTLHSSTDIRYLHVTEREDQYSIGIFLLPPGAEMPLHDHPYM 382
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: A0A6P9D7R7_PANGU (2-aminoethanethiol dioxygenase n=1 Tax=Pantherophis guttatus TaxID=94885 RepID=A0A6P9D7R7_PANGU) HSP 1 Score: 64.7 bits (156), Expect = 6.400e-9 Identity = 36/101 (35.64%), Postives = 50/101 (49.50%), Query Frame = 3
Query: 372 MDRTRAAVQLIAIARATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
M R A LI A GE ++Q + + + ++ E LG+ P + P+ + Y+HI + A FS+GVFVL GACIPLHDHP M
Sbjct: 1 MPRDEMAASLIQRVARQARATFGSGSGEAAGSELQRLRELLGQVSAEDLGLQPRGPSPVPGPN--QPPVSYMHICETARFSMGVFVLRAGACIPLHDHPGM 99
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: UPI00192F8016 (2-aminoethanethiol dioxygenase n=1 Tax=Crotalus tigris TaxID=88082 RepID=UPI00192F8016) HSP 1 Score: 64.3 bits (155), Expect = 8.690e-9 Identity = 37/103 (35.92%), Postives = 53/103 (51.46%), Query Frame = 3
Query: 366 IPMDRTRAAVQLIAIARATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
+P D AA + +AR T + G P ++Q + + + + E LG+ P + P + Y+HI + A FS+GVFVL GACIPLHDHP M
Sbjct: 1 MPRDEMAAASLIQRVARQARATFGA--GAGEAPGELQRLRELLGQVRAEDLGLQPRGPSPVPGPR--QPPVSYMHICETARFSMGVFVLRAGACIPLHDHPGM 99
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: UPI0013778AA7 (2-aminoethanethiol dioxygenase n=1 Tax=Thamnophis elegans TaxID=35005 RepID=UPI0013778AA7) HSP 1 Score: 63.9 bits (154), Expect = 1.190e-8 Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 3
Query: 372 MDRTRAAVQLIA-IARATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
M R A LI +AR T + GE + E +Q + + + ++ E LG+ P P + P + Y+HI + A FS+GVFVL GACIPLHDHP M
Sbjct: 1 MPRDEMAASLIQRVARQARATFGAGSSGEASGE-LQRLRELLGQVSAEDLGLQPRG-PSLGP-GASQPPVSYMHICETARFSMGVFVLRAGACIPLHDHPGM 99
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Match: A0A851PFY5_9GALL (AEDO dioxygenase (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851PFY5_9GALL) HSP 1 Score: 62.4 bits (150), Expect = 1.810e-8 Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 3
Query: 366 IPMDRTRAAVQLIAIARATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEATFSIGVFVLPPGACIPLHDHPDM 674
+P D A +Q + AR T S P G ED+Q + Q + + E L + P +P + Y+HI + +FS+GVF+L GACIPLHDHP M
Sbjct: 1 MPRDNMAALIQRV--ARQARVTFRS-PAGPGFGEDLQRLRQLLDEVRAEDLHLAPRGPAAAAP-------VSYMHICETESFSMGVFLLRSGACIPLHDHPGM 93 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13856.2840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig13856.2840.1 >prot_E-fasciculatus_F_contig13856.2840.1 ID=prot_E-fasciculatus_F_contig13856.2840.1|Name=mRNA_E-fasciculatus_F_contig13856.2840.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=102bp MDRTRAAVQLIAIARATATTIHSRPGGEMTPEDIQPIEQAMAMLTPEALGback to top mRNA from alignment at E-fasciculatus_F_contig13856:383..2019+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig13856.2840.1 ID=mRNA_E-fasciculatus_F_contig13856.2840.1|Name=mRNA_E-fasciculatus_F_contig13856.2840.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1637bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13856:383..2019+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13856:383..2019+ >mRNA_E-fasciculatus_F_contig13856.2840.1 ID=mRNA_E-fasciculatus_F_contig13856.2840.1|Name=mRNA_E-fasciculatus_F_contig13856.2840.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=612bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13856:383..2019+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |