prot_E-fasciculatus_F_contig1385.2836.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig1385.2836.1
Unique Name	prot_E-fasciculatus_F_contig1385.2836.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	188

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 2.490e-120
Identity = 180/187 (96.26%), Postives = 183/187 (97.86%), Query Frame = 0

Query:    1 MLRRVTSLVGRAAVRPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDSSSKKGDDDWTVLKRP 187
            MLRRV+SLVGRAAVRPR VHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQ+L+EEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD   KKGDDDWTVLKRP
Sbjct:    1 MLRRVSSLVGRAAVRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDGG-KKGDDDWTVLKRP 186

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 214 bits (544), Expect = 7.930e-68
Identity = 100/153 (65.36%), Postives = 128/153 (83.66%), Query Frame = 0

Query:   19 VHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            +HTEAKL E+G++LP+P  P GNF M V++G ++Y SGHLPT   G+  TGKVG ++S EEAQ AA+ +A+ L++S+KK++GDLDRV RIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE +D
Sbjct:   32 IHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 213 bits (542), Expect = 8.250e-67
Identity = 100/153 (65.36%), Postives = 127/153 (83.01%), Query Frame = 0

Query:   19 VHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            +HTEAKL E+G++LP P  P GNF M V++G ++Y SGHLPT   G+  TGKVG ++S EEAQ AA+ +A+ L++S+KK++GDLDRV RIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE +D
Sbjct:   83 IHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 206 bits (524), Expect = 7.370e-65
Identity = 98/168 (58.33%), Postives = 127/168 (75.60%), Query Frame = 0

Query:    4 RVTSLVGRAAVRPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            R TS     A+  R VHTEAK++E+G++LPTP  P  N++M  R GNLL+T+GHLP   +G+   GKVG+D + EEA  AAR+ A+ ++ ++K ++GDLD+V R+VKL GFVNC D F+ QPKV+NGASD   EV GERGVH RSAVGTNALPMNVPVE+EAI+E D+
Sbjct:   12 RATSAPAVRALAARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEIDE 179

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 200 bits (509), Expect = 6.210e-63
Identity = 99/153 (64.71%), Postives = 122/153 (79.74%), Query Frame = 0

Query:   19 VHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            V  EA+L +LGI+LP   AP GN+ + VRTGNLL+ +GH+P    G   TGKVG D S EE QEAA+ +AI L+A++K +LGDLD+V RIVKLVGFVNC DGF+ QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE +D
Sbjct:    2 VQIEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.120e-62
Identity = 98/164 (59.76%), Postives = 128/164 (78.05%), Query Frame = 0

Query:    6 TSLVGRAAVRPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF 169
            T  +  A V  R VHTEAKL++LG  LP   +P G++ + VR+GN ++T+GHLP    G+   GKVG DLS EEA +AA+  A+ ++A++K +LGDLDRV R+VK+VGFVNC DGFA QP+V+NGASDLFAEV GERG+H+RSAVGTN+LP+N+PVE+EAIVE 
Sbjct:   18 TQALQAAPVLMRGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEI 181

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A024UKU1_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UKU1_9STRA)

HSP 1 Score: 198 bits (503), Expect = 7.990e-62
Identity = 97/165 (58.79%), Postives = 122/165 (73.94%), Query Frame = 0

Query:    7 SLVGRAAVRPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            SL+  AA   R VHTEA++KELG  LP    P GN+  +VR GNL++T+GHLP    GE   GKVG DL+ EE  EAA  VA+ L+A++K++LGDLDRV RIVK+VGFVNC DGF  QP V+NG SD   ++FG+RG+H+RSAVGTNALP+ +PVE+E IVE  D
Sbjct:    4 SLLKPAAAAARFVHTEARIKELGYTLPAVATPKGNYRNSVRMGNLIFTAGHLPQPAGGELIKGKVGVDLTPEEGYEAAHHVALALVATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGTSDTLVKIFGDRGIHARSAVGTNALPLGIPVEVEIIVEIQD 168

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A485KSR4_9STRA (Aste57867_10922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR4_9STRA)

HSP 1 Score: 198 bits (503), Expect = 9.100e-62
Identity = 99/171 (57.89%), Postives = 123/171 (71.93%), Query Frame = 0

Query:    1 MLRRVTSLVGRAAVRPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            M R   +    AA   R VHTE ++KELG  LP    P GN+   VR+GNLL+T+GHLP    GE   GKVG+DL+ E+  EAAR VA+ + A++K++LGDLDRV RIVK+VGFVNC DGF  QP V+NG SD   E+FGERGVH+RSAVGTNALP+ +PVE+E IVE +D
Sbjct:    1 MFRSAVAAFKPAAAAVRRVHTENRIKELGYTLPAVATPKGNYRNVVRSGNLLFTAGHLPQPAGGELIKGKVGEDLTAEQGYEAARHVALAVCATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGFSDTVGEIFGERGVHARSAVGTNALPLGIPVEVECIVEVED 171

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A3R7HFK6_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HFK6_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.290e-61
Identity = 95/159 (59.75%), Postives = 125/159 (78.62%), Query Frame = 0

Query:   13 AVRPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            A   R+VH E KL+ELG  LP   +P GN+  +VR+GN +Y +GHLP    GE  TGKVG+DL+ EEA +AA  V++ ++A++K+++GDLD++ R+VKLVGFVNC DGFAGQP V+NGASD F +VFG +GVH+RSAVGTNALP+NV VEIEA+VE +D
Sbjct:   14 ATAVRNVHIERKLEELGYVLPEVASPKGNYRTSVRSGNTIYMAGHLPQPAGGELITGKVGKDLTPEEAYDAAHYVSLSIMATLKQEVGDLDKIKRVVKLVGFVNCVDGFAGQPAVINGASDTFGKVFGNKGVHARSAVGTNALPLNVAVEIEAVVEIED 172

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BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Match: A0A6S9K1N5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K1N5_HETAK)

HSP 1 Score: 194 bits (492), Expect = 5.000e-60
Identity = 94/174 (54.02%), Postives = 129/174 (74.14%), Query Frame = 0

Query:    1 MLRRVTSLVGRAAV---RPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDD 171
            +LRR   ++ +++V     R +H E +++ELG +LP  K P GNFV+  R GNLLYT+GHLP   +G+   GKVG+D+  + A +AA+ V + ++A++K ++GDLDRV  +VKL+GFVNC DGF  QP+VVNG SDL  E+FG++G HSRSAVGTNALP+NVPVEIEAI E +D
Sbjct:    4 LLRRANGVIPKSSVLVNAARQIHIEQRIEELGYKLPEMKPPAGNFVLVKRIGNLLYTAGHLPQPADGDLMLGKVGEDVDMDTAYKAAQCVGLNILATVKAEVGDLDRVRNVVKLMGFVNCPDGFRAQPQVVNGCSDLMVEIFGDKGRHSRSAVGTNALPLNVPVEIEAIFEVED 177

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1385.2836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	2.490e-120	96.26	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	7.930e-68	65.36	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	8.250e-67	65.36	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A5A8CF06_CAFRO	7.370e-65	58.33	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	6.210e-63	64.71	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A2R5GI79_9STRA	1.120e-62	59.76	Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID...	[more]
A0A024UKU1_9STRA	7.990e-62	58.79	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
A0A485KSR4_9STRA	9.100e-62	57.89	Aste57867_10922 protein n=1 Tax=Aphanomyces stella...	[more]
A0A3R7HFK6_9STRA	1.290e-61	59.75	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
A0A6S9K1N5_HETAK	5.000e-60	54.02	Hypothetical protein n=2 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 17..169 e-value: 1.8E-62 score: 211.3
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 20..168
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 22..164 e-value: 1.7E-30 score: 106.1
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 21..171

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1385	contig	E-fasciculatus_F_contig1385:7588..10259 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1385.2836.1	mRNA_E-fasciculatus_F_contig1385.2836.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig1385 7579..10615 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig1385.2836.1 ID=prot_E-fasciculatus_F_contig1385.2836.1|Name=mRNA_E-fasciculatus_F_contig1385.2836.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=188bp
MLRRVTSLVGRAAVRPRSVHTEAKLKELGIELPTPKAPLGNFVMTVRTGN
LLYTSGHLPTSLEGETTTGKVGQDLSEEEAQEAARKVAIQLIASIKKDLG
DLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAV
GTNALPMNVPVEIEAIVEFDDSSSKKGDDDWTVLKRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013813	Endoribo_LPSP/chorism_mut-like
IPR035959	RutC-like_sf