prot_E-fasciculatus_F_contig13843.2832.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13843.2832.1
Unique Nameprot_E-fasciculatus_F_contig13843.2832.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length185
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13843.2832.1 vs. uniprot
Match: D7G7K3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K3_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 1.870e-81
Identity = 132/185 (71.35%), Postives = 146/185 (78.92%), Query Frame = 0 
Query:    1 MDDDTKAPFKSMPVKAVTGTTVVDVHDSPPCY-APXXXGPPAGVGGDIKAAHGASIAILVSHGIALLVGCYTWGFWTTVLIINLDANVTGILTSIFVLCAPSKFVYVSCAVLYLVTGLLDMILVAVWFNCEYIDADAGVLTVLAMPNIIASVCCFYGFAWALKAFHNCDKNSDLTLPEVTDLFLA 184
            MDD TK P+K MP+     TTV    DSPPC  A    GPPA + GDIKAAHGASIAIL  H IALL+GCY WG WTTVLIINLDAN+TG+ TSIFVL APSKFVYVSCA+LY VTGLLDMILVA WFN EYIDA+AG+LT+LAMPNIIAS  CF G AWALK FHN D++SD  LPE +DLFL+
Sbjct:    1 MDDITKTPYKIMPMPMKAVTTV---QDSPPCCCARPCFGPPARMEGDIKAAHGASIAILAIHAIALLIGCYVWGDWTTVLIINLDANLTGVFTSIFVLWAPSKFVYVSCAILYGVTGLLDMILVAAWFNYEYIDANAGILTLLAMPNIIASFSCFLGCAWALKVFHNRDRDSDPRLPEASDLFLS 182
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13843.2832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7K3_ECTSI1.870e-8171.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..138
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..184
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..54
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13843contigE-fasciculatus_F_contig13843:1175..3437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13843.2832.1mRNA_E-fasciculatus_F_contig13843.2832.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13843 1175..3437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13843.2832.1 ID=prot_E-fasciculatus_F_contig13843.2832.1|Name=mRNA_E-fasciculatus_F_contig13843.2832.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=185bp
MDDDTKAPFKSMPVKAVTGTTVVDVHDSPPCYAPPCCGPPAGVGGDIKAA
HGASIAILVSHGIALLVGCYTWGFWTTVLIINLDANVTGILTSIFVLCAP
SKFVYVSCAVLYLVTGLLDMILVAVWFNCEYIDADAGVLTVLAMPNIIAS
VCCFYGFAWALKAFHNCDKNSDLTLPEVTDLFLA*
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