prot_E-fasciculatus_F_contig1384.2831.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig1384.2831.1
Unique Name	prot_E-fasciculatus_F_contig1384.2831.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	137

Homology

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BLAST of mRNA_E-fasciculatus_F_contig1384.2831.1 vs. uniprot
Match: D7FT18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT18_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 3.060e-88
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0

Query:    1 MEFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGSVLILLRVVVGSIFPQPPSRRDLSRRQLFK 136
            +EFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFG VLILLRVVVGSIFPQPPSRRDLSRRQLFK
Sbjct:   35 IEFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRRDLSRRQLFK 170

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BLAST of mRNA_E-fasciculatus_F_contig1384.2831.1 vs. uniprot
Match: A0A6H5L4Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y3_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 1.270e-86
Identity = 133/135 (98.52%), Postives = 133/135 (98.52%), Query Frame = 0

Query:    2 EFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGSVLILLRVVVGSIFPQPPSRRDLSRRQLFK 136
            EFQFLRESLVKAEVAHLDK GELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFG VLILLRVVVGSIFPQPPSRRDLSRRQLFK
Sbjct:   84 EFQFLRESLVKAEVAHLDKNGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRRDLSRRQLFK 218

[Close]

BLAST of mRNA_E-fasciculatus_F_contig1384.2831.1 vs. uniprot
Match: A0A835YLB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB3_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.730e-20
Identity = 47/118 (39.83%), Postives = 81/118 (68.64%), Query Frame = 0

Query:    2 EFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGSVLILLRVVVGSI 119
            E  F R +L+ AE+  L + GE+V     SR+++R  A +Y + W DA+ Q     P++S GLGR+VPR++V  IM+Y++R+I ++DV + R+ +G+G++C +FG +L+L+R  VG++
Sbjct:   61 ETAFPRVNLMSAELVRLYQ-GEIVDPTSLSRQKRRTTASSYAIKWLDAQRQTHMR-PMSSRGLGRQVPRSRVQEIMKYIKREIHEVDVSQARYTSGVGLICCIFGVLLLLMRAAVGNL 176

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig1384.2831.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig1384.2831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FT18_ECTSI	3.060e-88	98.53	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L4Y3_9PHAE	1.270e-86	98.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YLB3_9STRA	1.730e-20	39.83	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 117..136
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 94..116
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..93
None	No IPR available	TMHMM	TMhelix		coord: 94..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig1384	contig	E-fasciculatus_F_contig1384:15260..17374 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig1384.2831.1	mRNA_E-fasciculatus_F_contig1384.2831.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig1384 15260..17389 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig1384.2831.1 ID=prot_E-fasciculatus_F_contig1384.2831.1|Name=mRNA_E-fasciculatus_F_contig1384.2831.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp
MEFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAE
TQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGI
VCFVFGSVLILLRVVVGSIFPQPPSRRDLSRRQLFK*