prot_E-fasciculatus_F_contig1381.2808.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1381.2808.1
Unique Nameprot_E-fasciculatus_F_contig1381.2808.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length104
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: D7FL11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL11_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 1.060e-65
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    1 MPIRSWFPNMVMAMIAGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPSKGSPSVPS 103
            MPIRSWFPNMVMAMI+GPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTP+KG PS+PS
Sbjct:    1 MPIRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPNKGPPSLPS 103
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: A0A835YVT8_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT8_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.140e-33
Identity = 57/87 (65.52%), Postives = 69/87 (79.31%), Query Frame = 0 
Query:    1 MPIRSWFPNMVMAMIAGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            M ++ WFP+  M ++  P+R RP QA+F++ PKMTK EVKEYL K+Y VPVKKVMTQNF GKRKRI G RSI+ YKRP+FKKAIVT 
Sbjct:    1 MGVKEWFPSFFMQLVTMPTRGRPQQAAFRVSPKMTKLEVKEYLLKVYGVPVKKVMTQNFLGKRKRIQGSRSIISYKRPDFKKAIVTL 87
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: A0A7S3QJC9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJC9_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.620e-24
Identity = 50/86 (58.14%), Postives = 64/86 (74.42%), Query Frame = 0 
Query:    4 RSWFPNMVMAM--IAGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W PNM + +      +++ PA A+F+++PKMTK E+KEYLTKIYN+PVKKV T NF GKRKR MG++ IV YK  +FKKA VTF
Sbjct:   11 RVWMPNMPILLDGAKNATKTAPATATFRVKPKMTKHEIKEYLTKIYNLPVKKVNTANFAGKRKRAMGRQKIVEYKYKDFKKAFVTF 96
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: A0A6U3SB59_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB59_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.570e-23
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0 
Query:    3 IRSWFPNMVMAMIAG--PSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            +R W PNM + +++    + +  A A+F++ PKMTK EVKE+LTKIYN+PV KV TQN+ GKRKR++GKR I  YK  +FKKAIVTF
Sbjct:   11 LRVWMPNMPIVLLSARNATETSAATATFRVLPKMTKHEVKEHLTKIYNLPVAKVNTQNYLGKRKRVVGKRRIAYYKNADFKKAIVTF 97
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: A0A7S4IBC0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IBC0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 9.820e-23
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0 
Query:    4 RSWFPNMVMAMIAGPS--RSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W P M + ++   S   S+ A A F++ PKMTK E+KEYLTKIYN+PVKKV T N+ GKRKR++GKR I  YK  +FKKAIV F
Sbjct:   11 RMWMPTMPITLVKARSANESQSAMAVFRVMPKMTKHEIKEYLTKIYNLPVKKVNTMNYLGKRKRVIGKRGIAYYKYRDFKKAIVKF 96
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: B8C4N9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4N9_THAPS)

HSP 1 Score: 92.8 bits (229), Expect = 4.950e-22
Identity = 48/88 (54.55%), Postives = 64/88 (72.73%), Query Frame = 0 
Query:    4 RSWFPNMVMAMIAGP--SRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFAS 89
            + W P++ + ++     + S PA A F+I PKMTK EV+EYLTKIY++PVK+V TQN+ GKR RI+GKR IV  KRP++KKA V F S
Sbjct:   27 KMWMPSLPLVLLTATHATPSNPATAQFRILPKMTKHEVREYLTKIYDLPVKEVRTQNYLGKRMRIIGKRHIVYAKRPDYKKAFVVFGS 114
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: A0A448YYR3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYR3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.690e-21
Identity = 43/86 (50.00%), Postives = 64/86 (74.42%), Query Frame = 0 
Query:    4 RSWFPNMVMAMIAGPSRS--RPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W PNM M +++  + +  +PA+A+F++ P+MTK E+KEYLTKIY +PV+KV T N+ GKRK + G R ++ YK  +FKKA+V+F
Sbjct:   10 RMWMPNMPMMLVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVQKVNTANYLGKRKLVRGSRQVIRYKYADFKKAVVSF 95
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: K0TJH6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJH6_THAOC)

HSP 1 Score: 90.5 bits (223), Expect = 3.690e-21
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0 
Query:    4 RSWFPNMVMAMIAGPSRS--RPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W P+M + ++   + +   PAQA+F++ PKMTK EVKEYLTKIY +PV KV TQN+ GKR R+MGK  I   KRP++KKA V+F
Sbjct:   28 RMWMPHMPLVLLDAQNATLDTPAQATFRVLPKMTKHEVKEYLTKIYGLPVVKVRTQNYMGKRIRVMGKTHIAYGKRPDYKKAFVSF 113
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BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: A0A4D9DHX4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHX4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.030e-21
Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = 0 
Query:   12 MAMIAGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            MA+I  P+++ P QA F++ P M K E++EYLTKIY + V+KVMT N  G+RKRIMG R I+ YKRP+FKKA VT 
Sbjct:    1 MALIRAPTQATPYQAVFRVSPSMNKPEIREYLTKIYGLNVRKVMTANMAGRRKRIMGSRRILRYKRPDFKKAYVTL 76
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Match: A0A1E7FSR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSR6_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 8.250e-21
Identity = 42/86 (48.84%), Postives = 64/86 (74.42%), Query Frame = 0 
Query:    4 RSWFPNMVMAMIAGPSRS--RPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W PNM M M++  + +  +PA+A+F++ P+MTK E+KEYLTKIY +PV++V T N+ GKRK + G  +++ YK  +FKKA+V+F
Sbjct:   13 RMWMPNMPMLMVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVRQVNTSNYMGKRKIVRGSSAVIRYKYADFKKAVVSF 98
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1381.2808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL11_ECTSI1.060e-6596.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVT8_9STRA3.140e-3365.52Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S3QJC9_9STRA1.620e-2458.14Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U3SB59_9STRA2.570e-2356.32Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4IBC0_9STRA9.820e-2356.98Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B8C4N9_THAPS4.950e-2254.55Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A448YYR3_9STRA1.690e-2150.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
K0TJH6_THAOC3.690e-2154.65Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A4D9DHX4_9STRA4.030e-2157.89Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1E7FSR6_9STRA8.250e-2148.84Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 24..89
e-value: 1.3E-16
score: 60.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..99
e-value: 3.2E-25
score: 90.9
NoneNo IPR availablePANTHERPTHR12059:SF539S RIBOSOMAL PROTEIN L23, MITOCHONDRIALcoord: 4..93
NoneNo IPR availablePANTHERPTHR12059RIBOSOMAL PROTEIN L23-RELATEDcoord: 4..93
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 23..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1381contigE-fasciculatus_F_contig1381:8851..10947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1381.2808.1mRNA_E-fasciculatus_F_contig1381.2808.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1381 8789..11958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1381.2808.1 ID=prot_E-fasciculatus_F_contig1381.2808.1|Name=mRNA_E-fasciculatus_F_contig1381.2808.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=104bp
MPIRSWFPNMVMAMIAGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVP
VKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPSKGSPS
VPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012678Ribosomal_L23/L15e_core_dom_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013025Ribosomal_L25/23