prot_E-fasciculatus_F_contig13735.2761.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13735.2761.1
Unique Nameprot_E-fasciculatus_F_contig13735.2761.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length317
Homology
BLAST of mRNA_E-fasciculatus_F_contig13735.2761.1 vs. uniprot
Match: D7FH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH23_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 8.090e-106
Identity = 227/316 (71.84%), Postives = 235/316 (74.37%), Query Frame = 0
Query:    1 MEARNVWVAWLALETLKAPLCGSFVLQQAAPRGRTKYGAAAGSHCSAAAPRASRCSSLRGXXXPXXXXXXXLRSTRASSSALALAPLSATADGDTLGGDGVGKPGDKPAADSD--SDETGGTAKDEEAAVSEADVATETRRLMSVPTIDIKLELQMRGVEHRDAFEKTDLARRLAEARVSSSGXXXXXXXXXXXXXXXTAKA----AGRNYGGAPGDGPRENAHRPSEATATTVNEPQE---TAVATEG-GVASSGGGNSAYARDVAKGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAGGRQEAREDARRFP 306
            MEARNVWVAWLALETLKAPLCGSFVLQQA P GRTKY  AAGS CSAA PRA RCS  RG   P       LRS RASSSA+A  PLS TAD DTLG DGVGK GDKP A S   S ETGG       A    DVATETRRLMS PTIDIKLELQMRGVEHRDAFEK DLARRLAEARVSS G        XXXXXXX        AGR++GGA  DGPRENAHR ++A+    NEPQ    TAVATEG G A  GG N AYARDVA+GTRMGKAALARELNGMGIAHSRLSD+SVLARQYA  RQEAREDARRFP
Sbjct:    1 MEARNVWVAWLALETLKAPLCGSFVLQQAPPPGRTKYEPAAGSRCSAATPRA-RCSCSRGLHDPLLRPL--LRSPRASSSAIA--PLSGTADDDTLGRDGVGKAGDKPPAASSGSSHETGGVGTATGEAAVGTDVATETRRLMSEPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSSCGNNPSPSPDXXXXXXXXXXXXXXXAGRDFGGAAADGPRENAHRSNKASTMMGNEPQAAAATAVATEGRGAAPDGGSNRAYARDVARGTRMGKAALARELNGMGIAHSRLSDLSVLARQYAARRQEAREDARRFP 311          
BLAST of mRNA_E-fasciculatus_F_contig13735.2761.1 vs. uniprot
Match: A0A6H5JDP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP5_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.450e-94
Identity = 210/298 (70.47%), Postives = 220/298 (73.83%), Query Frame = 0
Query:   17 KAPLCGSFVLQQAAPRGRTKYGAAAGSHCSAAAPRASRCSSLRGXXXPXXXXXXXLRSTRASSSALALAPLSATADGDTLGGDGVGKPGDKPA---ADSDSDETGGTAKDEEAAVSEADVATETRRLMSVPTIDIKLELQMRGVEHRDAFEKTDLARRLAEARVSSSGXXXXXXXXXXXXXXXTAKAAGRNYGGAPGDGPRENAHRPSEATATTVNEPQE---TAVATEG-GVASSGGGNSAYARDVAKGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAGGRQEAREDARRFPP 307
            +APLCGSFVLQQA   GRTKY AAAG  CSAAAPRA RCS L G   P       LRS RASSSA+A  PLS TAD DT+GGDGVGKPGDKP    +D DSDETGG       A    DVATETRRLMSVPTIDIKLELQMRGVEHRDAFEK DLARRLAEARVS  G        XXXXXXX         GGA   GPRE+AHR ++A+ TT NEPQ    TAV TEG G AS G  +SAYARDVA+GTRMGKAALARELNGMGIAHSRLSDVSVLARQYA  RQEAREDARRFPP
Sbjct:    8 QAPLCGSFVLQQAPSPGRTKYEAAAGPRCSAAAPRA-RCSCLWGLHDPLLRPL--LRSPRASSSAIA--PLSGTADDDTIGGDGVGKPGDKPPGADSDFDSDETGGVGTATGRAAVSTDVATETRRLMSVPTIDIKLELQMRGVEHRDAFEKADLARRLAEARVSCCGNNPSPSHDXXXXXXXXXXXXXXXLGGAAAHGPRESAHRSNKASTTTGNEPQAAAATAVPTEGRGAASDGCSSSAYARDVARGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAARRQEAREDARRFPP 300          
BLAST of mRNA_E-fasciculatus_F_contig13735.2761.1 vs. uniprot
Match: A0A836CCS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCS4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 1.290e-7
Identity = 29/41 (70.73%), Postives = 37/41 (90.24%), Query Frame = 0
Query:  140 LMSVPTIDIKLELQMRGVEHRDAFEKTDLARRLAEARVSSS 180
            +M++PTIDIKLELQMRG++HRDA EK +LARRLA+AR S +
Sbjct:   82 IMTMPTIDIKLELQMRGIDHRDALEKQELARRLAQARASQA 122          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13735.2761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH23_ECTSI8.090e-10671.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDP5_9PHAE1.450e-9470.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCS4_9STRA1.290e-770.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..317
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13735contigE-fasciculatus_F_contig13735:248..1985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13735.2761.1mRNA_E-fasciculatus_F_contig13735.2761.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13735 248..2070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13735.2761.1 ID=prot_E-fasciculatus_F_contig13735.2761.1|Name=mRNA_E-fasciculatus_F_contig13735.2761.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=317bp
MEARNVWVAWLALETLKAPLCGSFVLQQAAPRGRTKYGAAAGSHCSAAAP
RASRCSSLRGLRNPLRPRLPQLRSTRASSSALALAPLSATADGDTLGGDG
VGKPGDKPAADSDSDETGGTAKDEEAAVSEADVATETRRLMSVPTIDIKL
ELQMRGVEHRDAFEKTDLARRLAEARVSSSGSPSPSPDDDDAATAATAKA
AGRNYGGAPGDGPRENAHRPSEATATTVNEPQETAVATEGGVASSGGGNS
AYARDVAKGTRMGKAALARELNGMGIAHSRLSDVSVLARQYAGGRQEARE
DARRFPPRPAGAGSSSS
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