prot_E-fasciculatus_F_contig13717.2748.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13717.2748.1
Unique Nameprot_E-fasciculatus_F_contig13717.2748.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length44
Homology
BLAST of mRNA_E-fasciculatus_F_contig13717.2748.1 vs. uniprot
Match: A0A6H5JEL6_9PHAE (TFIID_NTD2 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL6_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 3.590e-22
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAE 44
            QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMF+HGAE
Sbjct:  108 QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDHGAE 151          
BLAST of mRNA_E-fasciculatus_F_contig13717.2748.1 vs. uniprot
Match: D7FXT3_ECTSI (TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT3_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 6.920e-21
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAE 44
            QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMF+HGAE
Sbjct:  108 QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDHGAE 151          
BLAST of mRNA_E-fasciculatus_F_contig13717.2748.1 vs. uniprot
Match: A0A0L0DLT8_THETB (Transcription initiation factor TFIID subunit 5 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DLT8_THETB)

HSP 1 Score: 50.8 bits (120), Expect = 4.180e-6
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    1 QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAE 44
            ++Y  L +++  S E YR EL A++FPVFVHCYL LV   H  E
Sbjct:   65 ESYARLKDWITTSLEAYRDELSAILFPVFVHCYLDLVSKEHAEE 108          
BLAST of mRNA_E-fasciculatus_F_contig13717.2748.1 vs. uniprot
Match: A0A7S3BLV1_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BLV1_9VIRI)

HSP 1 Score: 47.4 bits (111), Expect = 7.020e-5
Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    3 YRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLV 37
            Y+ L E+V +S +LY+ ELE +++PVFVHCYL LV
Sbjct:   25 YKNLKEWVHSSLDLYKSELERILYPVFVHCYLDLV 59          
BLAST of mRNA_E-fasciculatus_F_contig13717.2748.1 vs. uniprot
Match: H9JWX2_BOMMO (TFIID_NTD2 domain-containing protein n=3 Tax=Bombyx TaxID=7090 RepID=H9JWX2_BOMMO)

HSP 1 Score: 47.0 bits (110), Expect = 9.610e-5
Identity = 19/40 (47.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    2 AYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNH 41
            AY GL +F+  S +LY+ EL  +++PVFVH YL L++++H
Sbjct:  142 AYDGLKKFIENSLDLYKYELSTLLYPVFVHMYLLLILYDH 181          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13717.2748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JEL6_9PHAE3.590e-2297.73TFIID_NTD2 domain-containing protein (Fragment) n=... [more]
D7FXT3_ECTSI6.920e-2197.73TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculo... [more]
A0A0L0DLT8_THETB4.180e-650.00Transcription initiation factor TFIID subunit 5 n=... [more]
A0A7S3BLV1_9VIRI7.020e-557.14Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
H9JWX2_BOMMO9.610e-547.50TFIID_NTD2 domain-containing protein n=3 Tax=Bomby... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037264TFIID subunit TAF5, NTD2 domain superfamilyGENE3D1.25.40.500coord: 1..44
e-value: 1.2E-13
score: 53.5
IPR037264TFIID subunit TAF5, NTD2 domain superfamilySUPERFAMILY160897Taf5 N-terminal domain-likecoord: 1..41
IPR007582TFIID subunit TAF5, NTD2 domainPFAMPF04494TFIID_NTD2coord: 1..42
e-value: 2.2E-13
score: 50.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13717contigE-fasciculatus_F_contig13717:1..132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13717.2748.1mRNA_E-fasciculatus_F_contig13717.2748.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13717 1..132 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13717.2748.1 ID=prot_E-fasciculatus_F_contig13717.2748.1|Name=mRNA_E-fasciculatus_F_contig13717.2748.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=44bp
QAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFNHGAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007582TFIID_NTD2
IPR037264TFIID_NTD2_sf