prot_E-fasciculatus_F_contig13712.2746.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13712.2746.1
Unique Nameprot_E-fasciculatus_F_contig13712.2746.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length56
Homology
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: D7FLF2_ECTSI (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF2_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 6.310e-24
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 ISQFVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLKKLVGA 55
            +  FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLK+LVGA
Sbjct:  376 VISFVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLKELVGA 430          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A6V1P662_HETAK (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P662_HETAK)

HSP 1 Score: 65.5 bits (158), Expect = 4.820e-11
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    4 FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLKK 51
            F+DIP+VIE  MEAHKAD    P+++DI+ VD+WAR +VD AAA LKK
Sbjct:  405 FLDIPKVIEAAMEAHKADFKTNPTLDDILAVDIWAREQVDVAAANLKK 452          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A835ZCZ6_9STRA (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ6_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.240e-9
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 ISQFVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQL 49
            +  ++DIPRVIE  MEAHK DL   P ++DIV+VD WAR  VD+AA +L
Sbjct:  375 VISYLDIPRVIEAAMEAHKKDLNMAPRLDDIVSVDAWARTCVDDAARKL 423          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: B2KJ88_PRYPA (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Prymnesium parvum TaxID=97485 RepID=B2KJ88_PRYPA)

HSP 1 Score: 59.7 bits (143), Expect = 5.260e-9
Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    4 FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLKK 51
            F  IP+VIE  MEAHKAD  A PS+EDI+ +D WAR +V E AA+L+K
Sbjct:  413 FFGIPKVIEQTMEAHKADFKADPSLEDILEIDSWARRQVVEEAARLEK 460          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A4P7ZT75_9SYNE (1-deoxy-D-xylulose 5-phosphate reductoisomerase n=8 Tax=Cyanobacteria TaxID=1117 RepID=A0A4P7ZT75_9SYNE)

HSP 1 Score: 59.3 bits (142), Expect = 7.150e-9
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    4 FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLK 50
            F+DIPR+I+VV + HKADL A PS++D++ VD W+R  V EAAA+L+
Sbjct:  361 FLDIPRLIDVVCDRHKADLTANPSLDDVLAVDAWSRQAVREAAARLQ 407          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A7S3ZRW4_9STRA (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRW4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.840e-8
Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    3 QFVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLKKL 52
            +++DIPRVIE  MEAHKAD +  PS+++I+ VDLWAR  V + A+  K++
Sbjct:  431 EYLDIPRVIEAAMEAHKADFIQEPSLDEIIEVDLWARRFVKDFASAKKEV 480          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A0J6B6U1_9SYNE (1-deoxy-D-xylulose 5-phosphate reductoisomerase n=4 Tax=Synechococcales TaxID=1890424 RepID=A0A0J6B6U1_9SYNE)

HSP 1 Score: 57.8 bits (138), Expect = 2.500e-8
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    4 FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQL 49
            F+DIP +IE+V + H+ADLMA PS+ D++ VD WAR  V EAAA+L
Sbjct:  361 FLDIPLLIELVCDRHRADLMANPSLSDVLAVDAWARQAVREAAARL 406          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A7S0YVI8_9CRYP (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YVI8_9CRYP)

HSP 1 Score: 56.6 bits (135), Expect = 6.440e-8
Identity = 29/52 (55.77%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    4 FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLKKLVGA 55
            F+DI +VIE  MEAHK DL  +PS+ DIV VD WAR K  E A   KK + A
Sbjct:  439 FMDIFKVIEATMEAHKGDLSMSPSLADIVQVDEWARSKTAEVAGAGKKTIPA 490          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A7S0U527_HEMAN (1-deoxy-D-xylulose-5-phosphate reductoisomerase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U527_HEMAN)

HSP 1 Score: 54.7 bits (130), Expect = 3.080e-7
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    4 FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQ 48
            F+DI +VIE  MEAHK DL  TPS++DIV VD WAR K  E A +
Sbjct:  443 FMDIFKVIEATMEAHKGDLSMTPSLDDIVKVDEWARKKTLEVAGK 487          
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Match: A0A316JLB9_9SYNE (1-deoxy-D-xylulose 5-phosphate reductoisomerase n=5 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A316JLB9_9SYNE)

HSP 1 Score: 54.3 bits (129), Expect = 4.190e-7
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    4 FVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAA 47
            F+DIP++I+ V + HKADLMA PS++D++ VD W+R  V EAAA
Sbjct:  361 FLDIPKLIDRVCDRHKADLMAHPSLDDVLAVDSWSRQAVREAAA 404          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13712.2746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF2_ECTSI6.310e-2492.731-deoxy-D-xylulose-5-phosphate reductoisomerase n=... [more]
A0A6V1P662_HETAK4.820e-1162.501-deoxy-D-xylulose-5-phosphate reductoisomerase n=... [more]
A0A835ZCZ6_9STRA5.240e-957.141-deoxy-D-xylulose-5-phosphate reductoisomerase n=... [more]
B2KJ88_PRYPA5.260e-960.421-deoxy-D-xylulose-5-phosphate reductoisomerase n=... [more]
A0A4P7ZT75_9SYNE7.150e-957.451-deoxy-D-xylulose 5-phosphate reductoisomerase n=... [more]
A0A7S3ZRW4_9STRA1.840e-852.001-deoxy-D-xylulose-5-phosphate reductoisomerase n=... [more]
A0A0J6B6U1_9SYNE2.500e-858.701-deoxy-D-xylulose 5-phosphate reductoisomerase n=... [more]
A0A7S0YVI8_9CRYP6.440e-855.771-deoxy-D-xylulose-5-phosphate reductoisomerase n=... [more]
A0A7S0U527_HEMAN3.080e-760.001-deoxy-D-xylulose-5-phosphate reductoisomerase n=... [more]
A0A316JLB9_9SYNE4.190e-756.821-deoxy-D-xylulose 5-phosphate reductoisomerase n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1740.10coord: 2..49
e-value: 2.6E-7
score: 32.6
IPR036169DXP reductoisomerase, C-terminal domain superfamilySUPERFAMILY690551-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domaincoord: 3..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13712contigE-fasciculatus_F_contig13712:241..729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13712.2746.1mRNA_E-fasciculatus_F_contig13712.2746.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13712 241..729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13712.2746.1 ID=prot_E-fasciculatus_F_contig13712.2746.1|Name=mRNA_E-fasciculatus_F_contig13712.2746.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=56bp
ISQFVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLK
KLVGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036169DXPR_C_sf