prot_E-fasciculatus_F_contig13681.2727.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13681.2727.1
Unique Nameprot_E-fasciculatus_F_contig13681.2727.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length226
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13681.2727.1 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 1.100e-73
Identity = 138/228 (60.53%), Postives = 146/228 (64.04%), Query Frame = 0 
Query:    1 QDPSAFELALARVNWDSASIRGVIVNFVCRSLLWGSWVTHHFYAIVKGKGPGDXXXXXXXGVSPARGGEGGLQTAAAEXXXGTTRHLE---CGAGGVVGTGENADGGREGDDGEETGCLEKLSPLRRRGKNNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWYSLDSRIPKPQRLGGTRGLVEHLAWEVREHHGHVFVIGGGAEAVAGVGDDGDGHAGPAENRV 225
            +DP+AFELALARV+WDSA+IRGVIVNFVCRSLLWGSWVTHHFYAIVK KGPGD       G+SP  GG          XXX  TRHLE                     GDDGE+TGC EKLSP RRRGK+NR R                             AWYSLDSRIPKPQRLGGTRGLVEHLAWEVREHHGHVFV+G GAE VAGVG D DGH G AE RV
Sbjct:   93 KDPTAFELALARVDWDSATIRGVIVNFVCRSLLWGSWVTHHFYAIVKAKGPGDGDD----GLSP--GGXXXXXXXXXXXXXXXTRHLERVGXXXXXXXXXXXXXXXXXXGDDGEQTGCFEKLSPSRRRGKDNRGRTRNRTSSNQGSCCGSDGGGAGG------TAWYSLDSRIPKPQRLGGTRGLVEHLAWEVREHHGHVFVVGEGAEEVAGVGHDSDGHVGTAEARV 308
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13681.2727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FI75_ECTSI1.100e-7360.53Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13681contigE-fasciculatus_F_contig13681:89..766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13681.2727.1mRNA_E-fasciculatus_F_contig13681.2727.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13681 89..1502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13681.2727.1 ID=prot_E-fasciculatus_F_contig13681.2727.1|Name=mRNA_E-fasciculatus_F_contig13681.2727.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=226bp
QDPSAFELALARVNWDSASIRGVIVNFVCRSLLWGSWVTHHFYAIVKGKG
PGDDDDDDDDGVSPARGGEGGLQTAAAEGGGGTTRHLECGAGGVVGTGEN
ADGGREGDDGEETGCLEKLSPLRRRGKNNRARNRNSSDQGSCCAASGTGA
GSDGGGATGGAAWYSLDSRIPKPQRLGGTRGLVEHLAWEVREHHGHVFVI
GGGAEAVAGVGDDGDGHAGPAENRV*
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