prot_E-fasciculatus_F_contig13665.2718.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13665.2718.1
Unique Nameprot_E-fasciculatus_F_contig13665.2718.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length213
Homology
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: D7FYA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYA5_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 7.550e-75
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESETAP 134
            LDLEC KLQAQAA MVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWE+QQLQVFNALKEGNVALNKLH+EMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESE AP
Sbjct:   40 LDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAP 172          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A836CK96_9STRA (Snf7-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK96_9STRA)

HSP 1 Score: 122 bits (306), Expect = 7.330e-31
Identity = 65/132 (49.24%), Postives = 92/132 (69.70%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESETA 133
            LD E   L  QA  +VKE RKDRAL+LLKIK+ K +QA KA +QL +V ++++T++WE  Q QV  AL EG  ALN LH+ MP++ VE+LMADT E++  E++++  I G+W+  NE++LL E   L+ E A
Sbjct:   47 LDGEAQMLTTQAQALVKEGRKDRALVLLKIKRFKAEQASKADAQLFTVTELLETVEWEGHQAQVLAALSEGTKALNSLHEAMPIEDVEQLMADTQEALEYEQQVNSIIAGAWSPENEDELLEEFEALQKEMA 178          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A067CN09_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CN09_SAPPC)

HSP 1 Score: 111 bits (278), Expect = 7.500e-27
Identity = 58/129 (44.96%), Postives = 96/129 (74.42%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELES 130
            L++E   L+++A  ++ +K+KDRA+L LK++K K  Q ++A + LL+VHQM+ +++WESQQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+ A  +EIS+ +GG+ +  +E+ +LAELAE+E+
Sbjct:   55 LEVESATLESKARQLLAKKQKDRAMLCLKMRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEA 183          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: H3H1K0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K0_PHYRM)

HSP 1 Score: 107 bits (267), Expect = 4.210e-25
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 129
            LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L+ V  M+DT++WE+QQLQVF  LK GN  LN +H EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   55 LDIEANQLHDSAKRLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMMETEEAQATANEISRVIGGSLTVEDEDAVLSELAEIE 182          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: W2QKK3_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QKK3_PHYPN)

HSP 1 Score: 107 bits (266), Expect = 6.330e-25
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 129
            LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L+ V  M+DT++WE+QQLQVF  LK GN  LN +H EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   55 LDIEANQLHDSAKRLLQVGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVESVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 182          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A1V9Z9J8_9STRA (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9J8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.590e-25
Identity = 60/129 (46.51%), Postives = 93/129 (72.09%), Query Frame = 0
Query:    1 QLDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 129
            QL+ E   L+A A  ++ +K+KDRA+L LK++K K  Q  +A + LL+VH M+D+++WE+QQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+ A  +EIS+ +GG+ T  +E+ +LAELAE+E
Sbjct:   53 QLEAESTTLEANARQLLAKKQKDRAMLCLKMRKFKLQQIAQADTHLLNVHTMIDSVEWETQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRMLGGALTVEDEDAVLAELAEIE 181          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A3M6VKN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 8.310e-25
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 129
            LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L+ V  M+DT++WE+QQLQVF  LK GN  LN +H EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   56 LDIEANQLYESAKKLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTMEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 183          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A1V9ZMW9_9STRA (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMW9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.310e-24
Identity = 60/133 (45.11%), Postives = 94/133 (70.68%), Query Frame = 0
Query:    1 QLDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESETA 133
            QL+ +   LQ +A  ++  K KDRALL LK++K K  Q ++A + L++VH M+D+++WESQQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+ A  +EIS+ +GG+ +  +E+ +LAELAE+E+  A
Sbjct:  711 QLEKDSEALQNKARELIANKHKDRALLCLKMRKFKLQQLEQADNHLMNVHTMIDSVEWESQQLQIFQGLKAGNAVLDAIHKEMTVEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEAAEA 843          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A485LCQ2_9STRA (Aste57867_18040 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCQ2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.430e-24
Identity = 56/128 (43.75%), Postives = 94/128 (73.44%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 129
            L++E  +L  +A  ++++K++DRA L L+++K KQ Q ++A S L++V QM+D+++WE+QQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+  + +EIS+ IGGS +  ++E +LAELA +E
Sbjct:   58 LEVESAELHEKAKRLLEKKQRDRAKLCLQLRKFKQQQIEQADSHLMNVLQMVDSVEWEAQQLQIFEGLKAGNSVLDAIHKEMTVEAVEDLMLETQEAQQLADEISRLIGGSISLDDDEAILAELAAIE 185          
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A5D6XUA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUA9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.510e-24
Identity = 59/129 (45.74%), Postives = 87/129 (67.44%), Query Frame = 0
Query:    2 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELES 130
            LD+E  +L   A  ++  +++DRA L LK+KK K+ Q  +A   LL+V +M+DT++WE+QQL+VF  LK GN  LN +H EM ++ VE LM +T E+     EIS+ IGGS T  +E+ +L ELAE+E+
Sbjct:   56 LDVEAQQLHESAKKLLLAEKRDRAKLALKVKKFKEQQMKQADEHLLTVLEMLDTVEWETQQLKVFEGLKAGNSLLNAIHQEMSVEAVENLMLETEEAQETANEISRLIGGSLTLEDEDAVLLELAEIEA 184          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYA5_ECTSI7.550e-7596.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK96_9STRA7.330e-3149.24Snf7-domain-containing protein (Fragment) n=1 Tax=... [more]
A0A067CN09_SAPPC7.500e-2744.96Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
H3H1K0_PHYRM4.210e-2547.66Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2QKK3_PHYPN6.330e-2547.66Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A1V9Z9J8_9STRA6.590e-2546.51Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A3M6VKN6_9STRA8.310e-2547.66Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A1V9ZMW9_9STRA1.310e-2445.11Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A485LCQ2_9STRA4.430e-2443.75Aste57867_18040 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XUA9_9STRA6.510e-2445.74Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availablePANTHERPTHR22761:SF5CHARGED MULTIVESICULAR BODY PROTEIN 6coord: 7..182
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 7..182
IPR005024Snf7 familyPFAMPF03357Snf7coord: 2..147
e-value: 1.6E-29
score: 102.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13665contigE-fasciculatus_F_contig13665:764..3530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13665.2718.1mRNA_E-fasciculatus_F_contig13665.2718.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13665 764..3530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13665.2718.1 ID=prot_E-fasciculatus_F_contig13665.2718.1|Name=mRNA_E-fasciculatus_F_contig13665.2718.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=213bp
QLDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVH
QMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIA
MEEEISKAIGGSWTDANEEDLLAELAELESETAPEPVPEPVPEPVPEPVV
PVPAEASKPSEEPAAQEGASSLEDLLPEAPTEAPVVVPAVADAVEPQAEE
EEEEERPVLVPA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam