mRNA_E-fasciculatus_F_contig13665.2718.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig13665.2718.1
Unique NamemRNA_E-fasciculatus_F_contig13665.2718.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: D7FYA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYA5_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 7.550e-75
Identity = 128/133 (96.24%), Postives = 130/133 (97.74%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESETAP 402
            LDLEC KLQAQAA MVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWE+QQLQVFNALKEGNVALNKLH+EMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESE AP
Sbjct:   40 LDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAAP 172
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A836CK96_9STRA (Snf7-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK96_9STRA)

HSP 1 Score: 122 bits (306), Expect = 7.330e-31
Identity = 65/132 (49.24%), Postives = 92/132 (69.70%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESETA 399
            LD E   L  QA  +VKE RKDRAL+LLKIK+ K +QA KA +QL +V ++++T++WE  Q QV  AL EG  ALN LH+ MP++ VE+LMADT E++  E++++  I G+W+  NE++LL E   L+ E A
Sbjct:   47 LDGEAQMLTTQAQALVKEGRKDRALVLLKIKRFKAEQASKADAQLFTVTELLETVEWEGHQAQVLAALSEGTKALNSLHEAMPIEDVEQLMADTQEALEYEQQVNSIIAGAWSPENEDELLEEFEALQKEMA 178
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A067CN09_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CN09_SAPPC)

HSP 1 Score: 111 bits (278), Expect = 7.500e-27
Identity = 58/129 (44.96%), Postives = 96/129 (74.42%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELES 390
            L++E   L+++A  ++ +K+KDRA+L LK++K K  Q ++A + LL+VHQM+ +++WESQQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+ A  +EIS+ +GG+ +  +E+ +LAELAE+E+
Sbjct:   55 LEVESATLESKARQLLAKKQKDRAMLCLKMRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEA 183
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: H3H1K0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K0_PHYRM)

HSP 1 Score: 107 bits (267), Expect = 4.210e-25
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 387
            LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L+ V  M+DT++WE+QQLQVF  LK GN  LN +H EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   55 LDIEANQLHDSAKRLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMMETEEAQATANEISRVIGGSLTVEDEDAVLSELAEIE 182
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: W2QKK3_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QKK3_PHYPN)

HSP 1 Score: 107 bits (266), Expect = 6.330e-25
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 387
            LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L+ V  M+DT++WE+QQLQVF  LK GN  LN +H EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   55 LDIEANQLHDSAKRLLQVGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVESVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 182
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A1V9Z9J8_9STRA (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9J8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 6.590e-25
Identity = 60/129 (46.51%), Postives = 93/129 (72.09%), Query Frame = 1 
Query:    1 QLDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 387
            QL+ E   L+A A  ++ +K+KDRA+L LK++K K  Q  +A + LL+VH M+D+++WE+QQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+ A  +EIS+ +GG+ T  +E+ +LAELAE+E
Sbjct:   53 QLEAESTTLEANARQLLAKKQKDRAMLCLKMRKFKLQQIAQADTHLLNVHTMIDSVEWETQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRMLGGALTVEDEDAVLAELAEIE 181
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A3M6VKN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 8.310e-25
Identity = 61/128 (47.66%), Postives = 87/128 (67.97%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 387
            LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L+ V  M+DT++WE+QQLQVF  LK GN  LN +H EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE+E
Sbjct:   56 LDIEANQLYESAKKLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTMEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 183
[Close]
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A1V9ZMW9_9STRA (Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMW9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.310e-24
Identity = 60/133 (45.11%), Postives = 94/133 (70.68%), Query Frame = 1 
Query:    1 QLDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESETA 399
            QL+ +   LQ +A  ++  K KDRALL LK++K K  Q ++A + L++VH M+D+++WESQQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+ A  +EIS+ +GG+ +  +E+ +LAELAE+E+  A
Sbjct:  711 QLEKDSEALQNKARELIANKHKDRALLCLKMRKFKLQQLEQADNHLMNVHTMIDSVEWESQQLQIFQGLKAGNAVLDAIHKEMTVEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEAAEA 843
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A485LCQ2_9STRA (Aste57867_18040 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCQ2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 4.430e-24
Identity = 56/128 (43.75%), Postives = 94/128 (73.44%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELE 387
            L++E  +L  +A  ++++K++DRA L L+++K KQ Q ++A S L++V QM+D+++WE+QQLQ+F  LK GN  L+ +H EM ++ VE+LM +T E+  + +EIS+ IGGS +  ++E +LAELA +E
Sbjct:   58 LEVESAELHEKAKRLLEKKQRDRAKLCLQLRKFKQQQIEQADSHLMNVLQMVDSVEWEAQQLQIFEGLKAGNSVLDAIHKEMTVEAVEDLMLETQEAQQLADEISRLIGGSISLDDDEAILAELAAIE 185
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BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Match: A0A5D6XUA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUA9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 6.510e-24
Identity = 59/129 (45.74%), Postives = 87/129 (67.44%), Query Frame = 1 
Query:    4 LDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELES 390
            LD+E  +L   A  ++  +++DRA L LK+KK K+ Q  +A   LL+V +M+DT++WE+QQL+VF  LK GN  LN +H EM ++ VE LM +T E+     EIS+ IGGS T  +E+ +L ELAE+E+
Sbjct:   56 LDVEAQQLHESAKKLLLAEKRDRAKLALKVKKFKEQQMKQADEHLLTVLEMLDTVEWETQQLKVFEGLKAGNSLLNAIHQEMSVEAVENLMLETEEAQETANEISRLIGGSLTLEDEDAVLLELAEIEA 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13665.2718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYA5_ECTSI7.550e-7596.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK96_9STRA7.330e-3149.24Snf7-domain-containing protein (Fragment) n=1 Tax=... [more]
A0A067CN09_SAPPC7.500e-2744.96Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
H3H1K0_PHYRM4.210e-2547.66Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2QKK3_PHYPN6.330e-2547.66Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A1V9Z9J8_9STRA6.590e-2546.51Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A3M6VKN6_9STRA8.310e-2547.66Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A1V9ZMW9_9STRA1.310e-2445.11Hydroxymethylglutaryl-CoA lyase, mitochondrial n=1... [more]
A0A485LCQ2_9STRA4.430e-2443.75Aste57867_18040 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XUA9_9STRA6.510e-2445.74Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13665contigE-fasciculatus_F_contig13665:764..3530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score239.2
Seed ortholog evalue1.8e-60
Seed eggNOG ortholog2880.D7FYA5
Preferred nameCHMP6
KEGG rclassRC00502,RC00503,RC01118,RC01946
KEGG koko:K01640,ko:K07204,ko:K08675,ko:K12195,ko:K16302
KEGG TC9.A.40.3
KEGG ReactionR01360,R08090
KEGG Pathwayko00072,ko00280,ko00281,ko00650,ko01100,ko04136,ko04138,ko04140,ko04144,ko04146,ko04150,ko04151,ko04152,ko04211,ko04213,ko04217,ko04714,ko04910,ko05206,map00072,map00280,map00281,map00650,map01100,map04136,map04138,map04140,map04144,map04146,map04150,map04151,map04152,map04211,map04213,map04217,map04714,map04910,map05206
KEGG ModuleM00036,M00088,M00412
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000815,GO:0000819,GO:0000920,GO:0001932,GO:0001933,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005768,GO:0005770,GO:0005829,GO:0005886,GO:0006469,GO:0006508,GO:0006511,GO:0006515,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006996,GO:0006997,GO:0007005,GO:0007032,GO:0007034,GO:0007049,GO:0007059,GO:0007080,GO:0007175,GO:0007176,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008593,GO:0009056,GO:0009057,GO:0009892,GO:0009966,GO:0009968,GO:0009987,GO:0010008,GO:0010256,GO:0010469,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019058,GO:0019068,GO:0019220,GO:0019222,GO:0019538,GO:0019941,GO:0022402,GO:0022607,GO:0023051,GO:0023057,GO:0030163,GO:0031090,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0031410,GO:0031974,GO:0031982,GO:0032268,GO:0032269,GO:0032509,GO:0032511,GO:0032991,GO:0033036,GO:0033365,GO:0033673,GO:0034613,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0042058,GO:0042059,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042623,GO:0042886,GO:0043086,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045184,GO:0045324,GO:0045859,GO:0045936,GO:0046618,GO:0046755,GO:0046907,GO:0047485,GO:0048285,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050000,GO:0050730,GO:0050732,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051276,GO:0051301,GO:0051303,GO:0051310,GO:0051338,GO:0051348,GO:0051503,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051704,GO:0060255,GO:0061024,GO:0061097,GO:0061099,GO:0061919,GO:0065003,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070676,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:0140096,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1903047,GO:1904669,GO:1904895,GO:1904902,GO:2000272
EggNOG free text desc.vacuolar transport
EggNOG OGsKOG2910@1,KOG2910@2759
EC3.4.21.53,4.1.3.4
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko02000,ko03029,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSnf7 family
Ec32 orthologEc-24_003200.1
Exons4
Model size639
Cds size639
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13665.2718.1prot_E-fasciculatus_F_contig13665.2718.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig13665 764..3530 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927862.2797852-CDS-E-fasciculatus_F_contig13665:763..10931622927862.2797852-CDS-E-fasciculatus_F_contig13665:763..1093Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 764..1093 -
1695995728.0780928-CDS-E-fasciculatus_F_contig13665:763..10931695995728.0780928-CDS-E-fasciculatus_F_contig13665:763..1093Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 764..1093 -
1622927862.2968578-CDS-E-fasciculatus_F_contig13665:2153..23061622927862.2968578-CDS-E-fasciculatus_F_contig13665:2153..2306Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 2154..2306 -
1695995728.0897691-CDS-E-fasciculatus_F_contig13665:2153..23061695995728.0897691-CDS-E-fasciculatus_F_contig13665:2153..2306Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 2154..2306 -
1622927862.3109965-CDS-E-fasciculatus_F_contig13665:2653..27111622927862.3109965-CDS-E-fasciculatus_F_contig13665:2653..2711Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 2654..2711 -
1695995728.0982413-CDS-E-fasciculatus_F_contig13665:2653..27111695995728.0982413-CDS-E-fasciculatus_F_contig13665:2653..2711Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 2654..2711 -
1622927862.330232-CDS-E-fasciculatus_F_contig13665:3432..35301622927862.330232-CDS-E-fasciculatus_F_contig13665:3432..3530Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 3433..3530 -
1695995728.1087952-CDS-E-fasciculatus_F_contig13665:3432..35301695995728.1087952-CDS-E-fasciculatus_F_contig13665:3432..3530Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig13665 3433..3530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig13665.2718.1

>prot_E-fasciculatus_F_contig13665.2718.1 ID=prot_E-fasciculatus_F_contig13665.2718.1|Name=mRNA_E-fasciculatus_F_contig13665.2718.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=213bp
QLDLECGKLQAQAAVMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVH
QMMDTIDWESQQLQVFNALKEGNVALNKLHDEMPLDKVEELMADTAESIA
MEEEISKAIGGSWTDANEEDLLAELAELESETAPEPVPEPVPEPVPEPVV
PVPAEASKPSEEPAAQEGASSLEDLLPEAPTEAPVVVPAVADAVEPQAEE
EEEEERPVLVPA*
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mRNA from alignment at E-fasciculatus_F_contig13665:764..3530-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig13665.2718.1 ID=mRNA_E-fasciculatus_F_contig13665.2718.1|Name=mRNA_E-fasciculatus_F_contig13665.2718.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2767bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13665:764..3530- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGTTGGACCTCGAATGCGGTAAGCTTCAGGCGCAGGCTGCCGTGATGGT
GAAGGAGAAGCGAAAAGACCGCGCGCTTCTTCTTCTCAAGATCAAGAAGT
GAGAATTTGTGATTGTTGTTAGTTCCTGTCTCCATATGTAACTTTTGTGT
CTGCAATAAGGCTGACTGCATTCTTGTAAGTTTGGATCCGGATGCATGCT
GTTTGACGGAGCGCATGCACACCACACACATACTTTTCGGTGGTTTCTTG
GGTTCGGAGGCGGGCCGGCTTGAAGCATTGATGTATGTAGATATATCCCA
AAAGGTTGGGTGATGGAGTTAGTTTTTGGCGTTCCGGGCTTGGGTCGTTC
TTGTTTTTTGTTTGCCCCTTTTGGGGGCCTTGACTTGTTGCCCGGTTAAC
CTGGCGCCTTTTCGTTGGCCAGCCAGTTAGCGCAGTCGATGCCGATCCAT
GAGCCAGACGCACACTTCTCCTGTCGCGAACACGTTGCTGTTTTGTCGGA
TCACTTTCTCTTGAATGTTACGCCGCGTGCTTCCTGTGTTGGCCCGGAGA
CCCTGCGGTTGCGTCCCCTGGTGTCACCGTCGGGGCGTCCCCTTCCGTAT
CTCAATGTTGTGTAGTAGAAGTCTTGCCTGCGCTTTGAGTCGCGCTACCA
CACCTCGCCCACACCACGCCGTTCTTCCGCATGCTCAACCCAGCTCAAGA
AAACGTTGAGCATCTTTCTGCGACCATTTTTCTTGTCGTGGGCAACAAAT
ATCCTTGGTGTTTGTTTTGTTTTTAGCAATTGTTTTTTCTTACCCGAATC
ATTGCGTTTTTGTCGTCAGGCTTAAGCAAGATCAAGCGGACAAGGCTAGC
TCACAGCTCCTCAGCGTTCACCAGATGGTGAGTTACTGCTCAGCCCCGAC
GTGAAGTTTGGCACGGCATGTCTTGACTAGTGGTTGTGGTCGTGCCGAAG
TGTTGCGGAAGATGGTGCATATCTAGGCGTTGTCGTGTTTTTTTTTTTCC
CGGGGTTGTTGTCTCTCTCGGCCTCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGTTGCTGCTCGACGTCATGTTTCTGCTGTTATGCCCAC
GATCTGGAATGATGCCAAGTAGTACCAGGAGTCTACTCAAGACGTTCAAG
AACTTGTCTCTTGGTCATGTTAGCGGGCGAAACCGTACTCACCCCGCCCC
TACAACACCCCTGCCCCTTATTAGATGGATACCATCGACTGGGAGTCCCA
GCAGCTTCAGGTGTTCAACGCCCTCAAGGAGGGGAACGTGGCGCTCAACA
AGCTCCACGACGAGATGCCCCTCGACAAGGTGGAGGAGCTCATGGCGGAC
ACGGCGGAGTCGATCGCAATGGAAGAGGTCAGTTTTATCCGTGTTGCTCA
GAGCCCCTTTTGTACTAGTGTAGTGCGGCGCCCTCCTTCCGTCAAGTGTC
TGTTGAAAACAGCCCGTGATCGACGGGAAAAATCATTGATTGCTTTTGAT
TTTTTTTTTATGTTGCTCTGCTTTGTTTTTTTTTTCCTTCATGTAAATGG
ATATTACCGCCAGCAGTATGTGAAGATACCCGCGTTACTGCGACGCAGCG
AATTTATTTTTTAGGAGAGTTTTTCAGGATGGAGTATAGTTATTCCAATT
CAAACCAGTGCGTTCGACTCGGGCGTCGTCTCACGTTCTTGTATATAGCA
CCTGAGCCATGTCAGCGGCGTGATCAGGGGATTCGCCCCCGATTCTTGTA
GGACGGGGTTCCAAATGTGGACGGACTGGAAAGACGCGTGTGTTGCCATG
GCGAGGAAATCATTATCTGGCCTTCACCGGGTTTTTCGATTAAGTAAATG
TGTTGGGTGAAGCATGCCATCGGGGAAGTTGGGTTAGGGTGAGGAAGTAG
GGTCTGCGTACCGTAAGTTGCACAAGATACCACACCCCCTAGACCCATTT
TCAAAGCTTGATTACTCCACGACGAAGAGGATGACCAAATCAAATGGTGC
GTTTTCGGAAAGCTCTCGACGAGACGGTTCGAACGCCGCCATTTTCGACA
CCGTCACTGTTTTACCTGCCGAGTGATCGAGCTTTGAAAATCGGTCCAGG
GGGTGTGATATCTTACGTCATGTCACCTACGGTACCCCCTCCCTGTTCTG
TTTCCCCGTGAGCCTAATTTCTCGCGAAGGCGGTCCGACGAAATCAACTA
CGTTTGTTCCAAGAACATGGAAGCAAACGTGCTGCCCCTTACAAGGGCGA
TGGTATTTGTTCCACATGCAGTCCAGGCCTGTTACTTACCGTCGCCCTAC
CGTTTTCATGCCCACATTCTTCTCAAGAAGCACCTCTGTCGTTTTCCAAC
CCCGTTTCGACAACGCTGCCTATACAATTGCTGAACTACTTCCTATCTCA
CCGTTTGATGTTTTTTCTATTGCTGTCCCGACCGCAGGAAATTTCCAAGG
CCATCGGCGGCTCTTGGACGGACGCCAACGAGGAAGACCTCCTTGCCGAG
TTAGCCGAGCTCGAGTCCGAAACGGCACCAGAACCTGTTCCAGAACCGGT
TCCAGAACCAGTTCCAGAACCAGTGGTCCCCGTCCCCGCCGAGGCCTCGA
AACCGTCGGAGGAACCTGCTGCGCAGGAAGGAGCATCCTCCCTGGAGGAC
CTGTTGCCGGAGGCTCCAACCGAGGCGCCGGTGGTCGTTCCTGCGGTTGC
TGATGCGGTGGAACCGCAGGCGGAGGAGGAGGAGGAGGAGGAGCGACCCG
TTCTCGTGCCTGCTTGA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig13665:764..3530-

>mRNA_E-fasciculatus_F_contig13665.2718.1 ID=mRNA_E-fasciculatus_F_contig13665.2718.1|Name=mRNA_E-fasciculatus_F_contig13665.2718.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1278bp|location=Sequence derived from alignment at E-fasciculatus_F_contig13665:764..3530- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CAGTTGGACCTCGAATGCGGTAAGCTTCAGGCGCAGGCTGCCGTGATGGT
GAAGGAGAAGCGAAAAGACCGCGCGCTTCTTCTTCTCAAGATCAAGAACA
GTTGGACCTCGAATGCGGTAAGCTTCAGGCGCAGGCTGCCGTGATGGTGA
AGGAGAAGCGAAAAGACCGCGCGCTTCTTCTTCTCAAGATCAAGAAGCTT
AAGCAAGATCAAGCGGACAAGGCTAGCTCACAGCTCCTCAGCGTTCACCA
GATGGCTTAAGCAAGATCAAGCGGACAAGGCTAGCTCACAGCTCCTCAGC
GTTCACCAGATGATGGATACCATCGACTGGGAGTCCCAGCAGCTTCAGGT
GTTCAACGCCCTCAAGGAGGGGAACGTGGCGCTCAACAAGCTCCACGACG
AGATGCCCCTCGACAAGGTGGAGGAGCTCATGGCGGACACGGCGGAGTCG
ATCGCAATGGAAGAGATGGATACCATCGACTGGGAGTCCCAGCAGCTTCA
GGTGTTCAACGCCCTCAAGGAGGGGAACGTGGCGCTCAACAAGCTCCACG
ACGAGATGCCCCTCGACAAGGTGGAGGAGCTCATGGCGGACACGGCGGAG
TCGATCGCAATGGAAGAGGAAATTTCCAAGGCCATCGGCGGCTCTTGGAC
GGACGCCAACGAGGAAGACCTCCTTGCCGAGTTAGCCGAGCTCGAGTCCG
AAACGGCACCAGAACCTGTTCCAGAACCGGTTCCAGAACCAGTTCCAGAA
CCAGTGGTCCCCGTCCCCGCCGAGGCCTCGAAACCGTCGGAGGAACCTGC
TGCGCAGGAAGGAGCATCCTCCCTGGAGGACCTGTTGCCGGAGGCTCCAA
CCGAGGCGCCGGTGGTCGTTCCTGCGGTTGCTGATGCGGTGGAACCGCAG
GCGGAGGAGGAGGAGGAGGAGGAGCGACCCGTTCTCGTGCCTGCTTGAGA
AATTTCCAAGGCCATCGGCGGCTCTTGGACGGACGCCAACGAGGAAGACC
TCCTTGCCGAGTTAGCCGAGCTCGAGTCCGAAACGGCACCAGAACCTGTT
CCAGAACCGGTTCCAGAACCAGTTCCAGAACCAGTGGTCCCCGTCCCCGC
CGAGGCCTCGAAACCGTCGGAGGAACCTGCTGCGCAGGAAGGAGCATCCT
CCCTGGAGGACCTGTTGCCGGAGGCTCCAACCGAGGCGCCGGTGGTCGTT
CCTGCGGTTGCTGATGCGGTGGAACCGCAGGCGGAGGAGGAGGAGGAGGA
GGAGCGACCCGTTCTCGTGCCTGCTTGA
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