mRNA_E-fasciculatus_F_contig1365.2708.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D8LKB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB9_ECTSI) HSP 1 Score: 617 bits (1591), Expect = 2.420e-216 Identity = 320/368 (86.96%), Postives = 330/368 (89.67%), Query Frame = 1
Query: 301 MSSEATVAAAAAA-KPDQTDGVGSVQSKRTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIGYSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVEAGEENSYPYELHDLLENTGTSLKSSGESAYAR-------------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPKICPPGTGVQDAALGETREATDSEVEPGSQGGHGHDAQQEGGQGEVLPLGVSAG 1362
MSSEATVAAAAAA KPD+ VGSVQSKRTNEVWHVRHGERCDEV GEEQQAWE+SPRC GGWFDPFLTRDGHVQACRAGEHL GLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALS+IGYSSAEATLMTDKDIIEAFPG+T+VPTDPLAPTSFEGAAEW+AAKACEKKGAGSDGDGE FSRVLAVGHREGTKEMARKNVPTPYCCIGIFKV+A EEN YPYELHDLL NTG SLKSSGESAYAR +D+E+GDGEVE ALAARIAALSDNMKGPKICPPGTGVQDAALGETREA SE EPG QG HGHDAQQEGGQGE LPLGVSAG
Sbjct: 1 MSSEATVAAAAAAAKPDRRVRVGSVQSKRTNEVWHVRHGERCDEVWGEEQQAWERSPRCNEGGWFDPFLTRDGHVQACRAGEHLKGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSEIGYSSAEATLMTDKDIIEAFPGVTIVPTDPLAPTSFEGAAEWLAAKACEKKGAGSDGDGECFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVKAEEENWYPYELHDLLINTGESLKSSGESAYARPKVATSEEENRPRNDDEDGDGEVE------ALAARIAALSDNMKGPKICPPGTGVQDAALGETREAPGSEGEPGGQGRHGHDAQQEGGQGEELPLGVSAG 362
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D8LKB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKB5_ECTSI) HSP 1 Score: 440 bits (1131), Expect = 5.630e-138 Identity = 219/287 (76.31%), Postives = 242/287 (84.32%), Query Frame = 1
Query: 382 RTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIGYSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVEAGEENSYPYELHDLLENTGTSLKSSGESAYAR-------------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPK 1203
RTNEVWHVRHGERCDEVRGEE++AWEKSPRC AGGWFDPFLT GHVQACRAG+HL GLPFNRQQKQPGSFD+V+TSPL+RAVQTAVCISQSLGNLPLQVVPGLCSCTAAL IGYSSAEATL+TD+DIIEAFPG+T+VP DPLAPTSF GAA W+AAKACEK+GAGSDGDGE FSRVLAVGHREGT+ MA + VPTP+CCIGIFKV A E+ YE+HDLL NTG SLK GES YAR +++E+G GEVE ALAAR+AAL+ NMKGPK
Sbjct: 2 RTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGQHLKGLPFNRQQKQPGSFDVVFTSPLVRAVQTAVCISQSLGNLPLQVVPGLCSCTAALRHIGYSSAEATLLTDEDIIEAFPGVTIVPRDPLAPTSFGGAASWLAAKACEKQGAGSDGDGECFSRVLAVGHREGTRAMAGRKVPTPHCCIGIFKVNAPEKKLCTYEIHDLLSNTGKSLKPKGESPYARPTSTMMEEESRPRNEHEDGGGEVE------ALAARVAALTVNMKGPK 282
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A6H5KYV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYV6_9PHAE) HSP 1 Score: 221 bits (564), Expect = 5.930e-61 Identity = 162/343 (47.23%), Postives = 197/343 (57.43%), Query Frame = 1
Query: 256 EIYAHSQKEIYGSKTMSSEATVAAAAAAKPDQT--DGVGSVQSKRTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNR--------QQKQPGS-FDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIG-YSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKV-EAGEEN---SYPYELHDLLENTGTSLKSSG--ESAYAR---------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPK 1203
E A Q+ + + A A AAA + +T D G V NEVWHVRHG K R T FDP LT +GHVQA AG +L+ LPFNR QQ+QPG FD+VYTSPL RAVQTAVC+S +LG LPL+VVPGLCS TAAL + G + S EA LMTD DI EAFPG+ V P DPLAPT+F+GA W+AAKACE A +VG EG +E+ VPTP+CCIG+F+V EAGE ++ YELHDLL +TG SL G S+YAR D + G + A EALAAR+ AL+ + +G K
Sbjct: 109 EASAGKQETVAAPHADGAPAAAATAAAEEGTETARDAAGVV-----NEVWHVRHG---------------KPGRKTLE-IFDPALTGEGHVQASAAGLYLSTLPFNRGGRRRRQPQQQQPGEGFDVVYTSPLARAVQTAVCLSWALGGLPLEVVPGLCSSTAALVRRGGFPSVEAELMTDGDIAEAFPGVVVRPRDPLAPTTFDGALAWLAAKACEGTTA--------MVANSSVG--EGKEEV----VPTPHCCIGVFRVAEAGEGGGGGTWAYELHDLLASTGESLGPWGGEPSSYARPLRTAAATPEDGKNGSRSGDDGAAAEALAARVMALTVHTEGSK 416
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D8LIR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR2_ECTSI) HSP 1 Score: 147 bits (370), Expect = 3.700e-33 Identity = 116/299 (38.80%), Postives = 142/299 (47.49%), Query Frame = 1
Query: 388 NEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNR---------QQKQPGS-FDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIG-YSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVEAGEENSYPYELHDLLENTGTSLKSSG--ESAYAR---------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPKICPPG 1218
+EVWHVRHG K R T FDP LT +GHVQA AG +L+ LPFNR QQ+ PG FD+VYTSPL RAVQTAVC+S++LG+LPL+VVPGLCSCTAAL + G + S EA LMTD DI EAFPG+ V R +E R+ G ++ YELHDLL +TG SL G S+YAR D E G + EALAAR+ AL+ + + K+ G
Sbjct: 154 SEVWHVRHG---------------KPGRKTLE-IFDPALTGEGHVQASAAGLYLSTLPFNRGGRRRRRQPQQQLPGEGFDVVYTSPLARAVQTAVCLSRALGDLPLEVVPGLCSCTAALVRRGGFPSVEAELMTDGDIAEAFPGVAV---------------------------------------------RHNQREGERR----------------GGRGAWAYELHDLLASTGKSLGPRGGEPSSYARPLGTVAATPEDGENGSWNGDDGPAAEALAARVMALTVHTERSKLGAKG 375
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A6H5JYI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI4_9PHAE) HSP 1 Score: 117 bits (294), Expect = 3.960e-28 Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 1
Query: 436 GEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTS 612
GEEQQAWE+SPRC A GWFDPFLTRDGH+Q CRAGEHL GLPFNRQQKQPGSFDIV S
Sbjct: 17 GEEQQAWERSPRCKASGWFDPFLTRDGHLQVCRAGEHLKGLPFNRQQKQPGSFDIVRPS 75
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI) HSP 1 Score: 112 bits (281), Expect = 5.390e-22 Identity = 98/254 (38.58%), Postives = 114/254 (44.88%), Query Frame = 2
Query: 1226 YKMPLSEKHARLQIRKWNLEVRVDTDTMLNKKVARARCFPWACQQGEDENIAPEVQRAATPTAIAQGAAGVASTRISWKVGSFGGRFGQGRLPPRSKKGYTPNQEAARPS------------P*AIPTPATTNLPKMSVHRQRMAGRWRRRR*RXXXXXXXXXXXXVASTNSGRNKRGRASACD--------ANEG--------------------------KIGSSDPDVIGGGQARTDPLVLPTQQMLAKLD 1849
YKM L EKHARLQIRKWNLE R+DTDTMLNKK AR R F WACQQ EDE+I+PE Q+ AT A A A VASTR + + G G+G+ PP SK+G ++ + S A TN XXXXX +G N R R S+ N G G SDP GGG+A TDPLVLPTQQ+ LD
Sbjct: 788 YKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCEDEHISPEAQKEATQKANALSAVRVASTRSPGRSVTSGD-IGRGKSPPWSKRGSAESRGSNTLSMSNTNAGDSNGHKAAENESTATNNGXXXXXXXXXXXXXXXXXXXXXXXXQPEEHAAEGDATAGDNSRSRPSSATWRIFRGSKGNGGDKSTRXXXXXXXXXXXXXXXXXXILPSEGGSDPGANGGGEAMTDPLVLPTQQLSTHLD 1040
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A7S2GED0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GED0_9EUKA) HSP 1 Score: 90.1 bits (222), Expect = 3.170e-15 Identity = 79/216 (36.57%), Postives = 101/216 (46.76%), Query Frame = 1
Query: 391 EVWHVRHGERCDEVRGEEQQAWEKS-PRCTAGG-WFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIGYSSAEA--TLMTDKDIIEAFPGIT-VVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVP---------TPYCCIGIF 996
EV+ VRHGER DEV GEE++ W S +C G FDP LT G QA A L L QP FD+V+ SPL+R VQTA + + G +P+ +VPGL C AAL S+ L + + P + VP P FE C AGS G RVL + HRE + +A++ TPY CIG+F
Sbjct: 282 EVYIVRHGERVDEVDGEERRRWITSLEQCADGNDGFDPPLTIHGVAQAADAARSLRAL-----LPQPKPFDVVFCSPLVRCVQTAEHFAYTFG-IPITLVPGLGECCAALHHRSRSAKRRWPLLQPLEQLRVLCPRASFTVPDIASLPERFEDGP-----LTC----AGSLAQGRR--RVLLISHRESIRSLAKRQQSKDRKSDDRNTPYACIGLF 480
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A0G4GIZ6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GIZ6_9ALVE) HSP 1 Score: 77.8 bits (190), Expect = 7.260e-12 Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 346 DQTDGVGSVQS--KRTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALS 717
++ VG + S K +W VRH ER DE R ++AW+ C WFDP LT GH A E L + Q +FD VYTSP++R++QTA +++ LG + +QVV GL +CTAALS
Sbjct: 13 EEASAVGELLSTVKSPVRLWIVRHAERMDEAR---EEAWKWREVC-GERWFDPPLTDKGHEMARNCAEVLKEIA----TAQGVTFDAVYTSPMMRSLQTADPLARVLG-VDVQVVSGLAACTAALS 129
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: F2UER2_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UER2_SALR5) HSP 1 Score: 68.9 bits (167), Expect = 1.680e-8 Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query: 394 VWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAAL 714
V+ +RH ER + + EE + W KS R +DP +T G QA A HL R +QP F +Y+SPL+R +QTAV ++ LG +P+++V GL +CT AL
Sbjct: 127 VYLLRHAERAENM--EEHETWLKSGRV-----YDPPITERGRQQALTASAHLQ----QRHAEQP--FACIYSSPLMRCMQTAVIVADHLG-IPIRIVQGLAACTRAL 219 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1365.2708.1 >prot_E-fasciculatus_F_contig1365.2708.1 ID=prot_E-fasciculatus_F_contig1365.2708.1|Name=mRNA_E-fasciculatus_F_contig1365.2708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp MPLSEKHARLQIRKWNLEVRVDTDTMLNKKVARARCFPWACQQGEDENIAback to top mRNA from alignment at E-fasciculatus_F_contig1365:4793..8970- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1365.2708.1 ID=mRNA_E-fasciculatus_F_contig1365.2708.1|Name=mRNA_E-fasciculatus_F_contig1365.2708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4178bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:4793..8970- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1365:4793..8970- >mRNA_E-fasciculatus_F_contig1365.2708.1 ID=mRNA_E-fasciculatus_F_contig1365.2708.1|Name=mRNA_E-fasciculatus_F_contig1365.2708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:4793..8970- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |