mRNA_E-fasciculatus_F_contig1365.2708.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1365.2708.1
Unique NamemRNA_E-fasciculatus_F_contig1365.2708.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D8LKB9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB9_ECTSI)

HSP 1 Score: 617 bits (1591), Expect = 2.420e-216
Identity = 320/368 (86.96%), Postives = 330/368 (89.67%), Query Frame = 1
Query:  301 MSSEATVAAAAAA-KPDQTDGVGSVQSKRTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIGYSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVEAGEENSYPYELHDLLENTGTSLKSSGESAYAR-------------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPKICPPGTGVQDAALGETREATDSEVEPGSQGGHGHDAQQEGGQGEVLPLGVSAG 1362
            MSSEATVAAAAAA KPD+   VGSVQSKRTNEVWHVRHGERCDEV GEEQQAWE+SPRC  GGWFDPFLTRDGHVQACRAGEHL GLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALS+IGYSSAEATLMTDKDIIEAFPG+T+VPTDPLAPTSFEGAAEW+AAKACEKKGAGSDGDGE FSRVLAVGHREGTKEMARKNVPTPYCCIGIFKV+A EEN YPYELHDLL NTG SLKSSGESAYAR             +D+E+GDGEVE      ALAARIAALSDNMKGPKICPPGTGVQDAALGETREA  SE EPG QG HGHDAQQEGGQGE LPLGVSAG
Sbjct:    1 MSSEATVAAAAAAAKPDRRVRVGSVQSKRTNEVWHVRHGERCDEVWGEEQQAWERSPRCNEGGWFDPFLTRDGHVQACRAGEHLKGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSEIGYSSAEATLMTDKDIIEAFPGVTIVPTDPLAPTSFEGAAEWLAAKACEKKGAGSDGDGECFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVKAEEENWYPYELHDLLINTGESLKSSGESAYARPKVATSEEENRPRNDDEDGDGEVE------ALAARIAALSDNMKGPKICPPGTGVQDAALGETREAPGSEGEPGGQGRHGHDAQQEGGQGEELPLGVSAG 362          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D8LKB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKB5_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 5.630e-138
Identity = 219/287 (76.31%), Postives = 242/287 (84.32%), Query Frame = 1
Query:  382 RTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIGYSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVEAGEENSYPYELHDLLENTGTSLKSSGESAYAR-------------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPK 1203
            RTNEVWHVRHGERCDEVRGEE++AWEKSPRC AGGWFDPFLT  GHVQACRAG+HL GLPFNRQQKQPGSFD+V+TSPL+RAVQTAVCISQSLGNLPLQVVPGLCSCTAAL  IGYSSAEATL+TD+DIIEAFPG+T+VP DPLAPTSF GAA W+AAKACEK+GAGSDGDGE FSRVLAVGHREGT+ MA + VPTP+CCIGIFKV A E+    YE+HDLL NTG SLK  GES YAR             +++E+G GEVE      ALAAR+AAL+ NMKGPK
Sbjct:    2 RTNEVWHVRHGERCDEVRGEERRAWEKSPRCKAGGWFDPFLTSYGHVQACRAGQHLKGLPFNRQQKQPGSFDVVFTSPLVRAVQTAVCISQSLGNLPLQVVPGLCSCTAALRHIGYSSAEATLLTDEDIIEAFPGVTIVPRDPLAPTSFGGAASWLAAKACEKQGAGSDGDGECFSRVLAVGHREGTRAMAGRKVPTPHCCIGIFKVNAPEKKLCTYEIHDLLSNTGKSLKPKGESPYARPTSTMMEEESRPRNEHEDGGGEVE------ALAARVAALTVNMKGPK 282          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A6H5KYV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYV6_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 5.930e-61
Identity = 162/343 (47.23%), Postives = 197/343 (57.43%), Query Frame = 1
Query:  256 EIYAHSQKEIYGSKTMSSEATVAAAAAAKPDQT--DGVGSVQSKRTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNR--------QQKQPGS-FDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIG-YSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKV-EAGEEN---SYPYELHDLLENTGTSLKSSG--ESAYAR---------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPK 1203
            E  A  Q+ +       + A  A AAA +  +T  D  G V     NEVWHVRHG               K  R T    FDP LT +GHVQA  AG +L+ LPFNR        QQ+QPG  FD+VYTSPL RAVQTAVC+S +LG LPL+VVPGLCS TAAL + G + S EA LMTD DI EAFPG+ V P DPLAPT+F+GA  W+AAKACE   A             +VG  EG +E+    VPTP+CCIG+F+V EAGE     ++ YELHDLL +TG SL   G   S+YAR          D + G    +  A  EALAAR+ AL+ + +G K
Sbjct:  109 EASAGKQETVAAPHADGAPAAAATAAAEEGTETARDAAGVV-----NEVWHVRHG---------------KPGRKTLE-IFDPALTGEGHVQASAAGLYLSTLPFNRGGRRRRQPQQQQPGEGFDVVYTSPLARAVQTAVCLSWALGGLPLEVVPGLCSSTAALVRRGGFPSVEAELMTDGDIAEAFPGVVVRPRDPLAPTTFDGALAWLAAKACEGTTA--------MVANSSVG--EGKEEV----VPTPHCCIGVFRVAEAGEGGGGGTWAYELHDLLASTGESLGPWGGEPSSYARPLRTAAATPEDGKNGSRSGDDGAAAEALAARVMALTVHTEGSK 416          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D8LIR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR2_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 3.700e-33
Identity = 116/299 (38.80%), Postives = 142/299 (47.49%), Query Frame = 1
Query:  388 NEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNR---------QQKQPGS-FDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIG-YSSAEATLMTDKDIIEAFPGITVVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVPTPYCCIGIFKVEAGEENSYPYELHDLLENTGTSLKSSG--ESAYAR---------SDNEEGDGEVEALAEVEALAARIAALSDNMKGPKICPPG 1218
            +EVWHVRHG               K  R T    FDP LT +GHVQA  AG +L+ LPFNR         QQ+ PG  FD+VYTSPL RAVQTAVC+S++LG+LPL+VVPGLCSCTAAL + G + S EA LMTD DI EAFPG+ V                                             R   +E  R+                G   ++ YELHDLL +TG SL   G   S+YAR          D E G    +     EALAAR+ AL+ + +  K+   G
Sbjct:  154 SEVWHVRHG---------------KPGRKTLE-IFDPALTGEGHVQASAAGLYLSTLPFNRGGRRRRRQPQQQLPGEGFDVVYTSPLARAVQTAVCLSRALGDLPLEVVPGLCSCTAALVRRGGFPSVEAELMTDGDIAEAFPGVAV---------------------------------------------RHNQREGERR----------------GGRGAWAYELHDLLASTGKSLGPRGGEPSSYARPLGTVAATPEDGENGSWNGDDGPAAEALAARVMALTVHTERSKLGAKG 375          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A6H5JYI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI4_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 3.960e-28
Identity = 51/59 (86.44%), Postives = 53/59 (89.83%), Query Frame = 1
Query:  436 GEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTS 612
            GEEQQAWE+SPRC A GWFDPFLTRDGH+Q CRAGEHL GLPFNRQQKQPGSFDIV  S
Sbjct:   17 GEEQQAWERSPRCKASGWFDPFLTRDGHLQVCRAGEHLKGLPFNRQQKQPGSFDIVRPS 75          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.390e-22
Identity = 98/254 (38.58%), Postives = 114/254 (44.88%), Query Frame = 2
Query: 1226 YKMPLSEKHARLQIRKWNLEVRVDTDTMLNKKVARARCFPWACQQGEDENIAPEVQRAATPTAIAQGAAGVASTRISWKVGSFGGRFGQGRLPPRSKKGYTPNQEAARPS------------P*AIPTPATTNLPKMSVHRQRMAGRWRRRR*RXXXXXXXXXXXXVASTNSGRNKRGRASACD--------ANEG--------------------------KIGSSDPDVIGGGQARTDPLVLPTQQMLAKLD 1849
            YKM L EKHARLQIRKWNLE R+DTDTMLNKK AR R F WACQQ EDE+I+PE Q+ AT  A A  A  VASTR   +  + G   G+G+ PP SK+G   ++ +   S              A      TN                     XXXXX            +G N R R S+           N G                            G SDP   GGG+A TDPLVLPTQQ+   LD
Sbjct:  788 YKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCEDEHISPEAQKEATQKANALSAVRVASTRSPGRSVTSGD-IGRGKSPPWSKRGSAESRGSNTLSMSNTNAGDSNGHKAAENESTATNNGXXXXXXXXXXXXXXXXXXXXXXXXQPEEHAAEGDATAGDNSRSRPSSATWRIFRGSKGNGGDKSTRXXXXXXXXXXXXXXXXXXILPSEGGSDPGANGGGEAMTDPLVLPTQQLSTHLD 1040          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A7S2GED0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GED0_9EUKA)

HSP 1 Score: 90.1 bits (222), Expect = 3.170e-15
Identity = 79/216 (36.57%), Postives = 101/216 (46.76%), Query Frame = 1
Query:  391 EVWHVRHGERCDEVRGEEQQAWEKS-PRCTAGG-WFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALSQIGYSSAEA--TLMTDKDIIEAFPGIT-VVPTDPLAPTSFEGAAEWVAAKACEKKGAGSDGDGEYFSRVLAVGHREGTKEMARKNVP---------TPYCCIGIF 996
            EV+ VRHGER DEV GEE++ W  S  +C  G   FDP LT  G  QA  A   L  L       QP  FD+V+ SPL+R VQTA   + + G +P+ +VPGL  C AAL     S+      L   + +    P  +  VP     P  FE          C    AGS   G    RVL + HRE  + +A++            TPY CIG+F
Sbjct:  282 EVYIVRHGERVDEVDGEERRRWITSLEQCADGNDGFDPPLTIHGVAQAADAARSLRAL-----LPQPKPFDVVFCSPLVRCVQTAEHFAYTFG-IPITLVPGLGECCAALHHRSRSAKRRWPLLQPLEQLRVLCPRASFTVPDIASLPERFEDGP-----LTC----AGSLAQGRR--RVLLISHRESIRSLAKRQQSKDRKSDDRNTPYACIGLF 480          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: A0A0G4GIZ6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GIZ6_9ALVE)

HSP 1 Score: 77.8 bits (190), Expect = 7.260e-12
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 1
Query:  346 DQTDGVGSVQS--KRTNEVWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAALS 717
            ++   VG + S  K    +W VRH ER DE R   ++AW+    C    WFDP LT  GH  A    E L  +       Q  +FD VYTSP++R++QTA  +++ LG + +QVV GL +CTAALS
Sbjct:   13 EEASAVGELLSTVKSPVRLWIVRHAERMDEAR---EEAWKWREVC-GERWFDPPLTDKGHEMARNCAEVLKEIA----TAQGVTFDAVYTSPMMRSLQTADPLARVLG-VDVQVVSGLAACTAALS 129          
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Match: F2UER2_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UER2_SALR5)

HSP 1 Score: 68.9 bits (167), Expect = 1.680e-8
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query:  394 VWHVRHGERCDEVRGEEQQAWEKSPRCTAGGWFDPFLTRDGHVQACRAGEHLNGLPFNRQQKQPGSFDIVYTSPLLRAVQTAVCISQSLGNLPLQVVPGLCSCTAAL 714
            V+ +RH ER + +  EE + W KS R      +DP +T  G  QA  A  HL      R  +QP  F  +Y+SPL+R +QTAV ++  LG +P+++V GL +CT AL
Sbjct:  127 VYLLRHAERAENM--EEHETWLKSGRV-----YDPPITERGRQQALTASAHLQ----QRHAEQP--FACIYSSPLMRCMQTAVIVADHLG-IPIRIVQGLAACTRAL 219          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1365.2708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LKB9_ECTSI2.420e-21686.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKB5_ECTSI5.630e-13876.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KYV6_9PHAE5.930e-6147.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIR2_ECTSI3.700e-3338.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYI4_9PHAE3.960e-2886.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVL6_ECTSI5.390e-2238.58Hypothetical leucine rich repeat and GCG domain-co... [more]
A0A7S2GED0_9EUKA3.170e-1536.57Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0G4GIZ6_9ALVE7.260e-1241.27Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
F2UER2_SALR51.680e-840.19Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1365contigE-fasciculatus_F_contig1365:4793..8970 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score108.6
Seed ortholog evalue1.9e-21
Seed eggNOG ortholog2880.D7FVL6
KEGG koko:K17307
EggNOG free text desc.calcium ion binding
EggNOG OGsKOG1217@1,KOG1217@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size2029
Cds size330
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1365.2708.1prot_E-fasciculatus_F_contig1365.2708.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1365 5261..6262 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927861.347187-UTR-E-fasciculatus_F_contig1365:4792..52601622927861.347187-UTR-E-fasciculatus_F_contig1365:4792..5260Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 4793..5260 -
1695995727.5959287-UTR-E-fasciculatus_F_contig1365:4792..52601695995727.5959287-UTR-E-fasciculatus_F_contig1365:4792..5260Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 4793..5260 -
1622927861.3911233-UTR-E-fasciculatus_F_contig1365:6262..62711622927861.3911233-UTR-E-fasciculatus_F_contig1365:6262..6271Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 6263..6271 -
1695995727.6402135-UTR-E-fasciculatus_F_contig1365:6262..62711695995727.6402135-UTR-E-fasciculatus_F_contig1365:6262..6271Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 6263..6271 -
1622927861.4039006-UTR-E-fasciculatus_F_contig1365:7249..75461622927861.4039006-UTR-E-fasciculatus_F_contig1365:7249..7546Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 7250..7546 -
1695995727.6511433-UTR-E-fasciculatus_F_contig1365:7249..75461695995727.6511433-UTR-E-fasciculatus_F_contig1365:7249..7546Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 7250..7546 -
1622927861.416053-UTR-E-fasciculatus_F_contig1365:8045..89701622927861.416053-UTR-E-fasciculatus_F_contig1365:8045..8970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 8046..8970 -
1695995727.661745-UTR-E-fasciculatus_F_contig1365:8045..89701695995727.661745-UTR-E-fasciculatus_F_contig1365:8045..8970Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig1365 8046..8970 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927861.3642254-CDS-E-fasciculatus_F_contig1365:5260..54551622927861.3642254-CDS-E-fasciculatus_F_contig1365:5260..5455Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 5261..5455 -
1695995727.617444-CDS-E-fasciculatus_F_contig1365:5260..54551695995727.617444-CDS-E-fasciculatus_F_contig1365:5260..5455Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 5261..5455 -
1622927861.377812-CDS-E-fasciculatus_F_contig1365:6127..62621622927861.377812-CDS-E-fasciculatus_F_contig1365:6127..6262Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 6128..6262 -
1695995727.627798-CDS-E-fasciculatus_F_contig1365:6127..62621695995727.627798-CDS-E-fasciculatus_F_contig1365:6127..6262Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1365 6128..6262 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1365.2708.1

>prot_E-fasciculatus_F_contig1365.2708.1 ID=prot_E-fasciculatus_F_contig1365.2708.1|Name=mRNA_E-fasciculatus_F_contig1365.2708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=110bp
MPLSEKHARLQIRKWNLEVRVDTDTMLNKKVARARCFPWACQQGEDENIA
PEVQRAATPTAIAQGAAGVASTRISWKVGSFGGRFGQGRLPPRSKKGYTP
NQEAARPSP*
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mRNA from alignment at E-fasciculatus_F_contig1365:4793..8970-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1365.2708.1 ID=mRNA_E-fasciculatus_F_contig1365.2708.1|Name=mRNA_E-fasciculatus_F_contig1365.2708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4178bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:4793..8970- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GCGTTCTTAGATTGTAGACAAATGAAAGGAGTATTTCCACGAAAGCCCAG AGGAGAGGACGCACGCACACGTGATGACAACTTCATTGTGTTAAGACTCG TCGTGCTAGTTGGGCCGCCCATGGAGGGAAGCTCTCTTCTACAAGTGACT GCAGTACGATAAAACATTCGTTTACGTGCAAGAAGACAGTTCTCGGTTCT CGGTGTTTGACGCCGCCGTAAAGCACCGGCAGCGGTTCACACGTGACTTT CTTTGGAAATATACGCACATTCACAAAAAGAAATCTACGGCAGCAAGACT ATGTCGTCCGAAGCCACCGTAGCGGCAGCAGCAGCCGCGAAACCGGACCA AACAGATGGAGTTGGAAGCGTACAAAGCAAGAGGACCAACGAGGTGTGGC ACGTCCGACACGGCGAACGATGTGACGAAGTACGGGGAGAGGAGCAGCAG GCCTGGGAAAAGTCACCCAGATGTACGGCAGGCGGGTGGTTTGATCCATT CCTCACCAGAGACGGCCATGTGCAGGCGTGCCGAGCTGGGGAGCATCTTA ATGGCCTGCCGTTCAACCGGCAGCAGAAGCAACCGGGAAGCTTCGACATT GTGTACACATCACCACTGCTCCGAGCTGTCCAAACAGCCGTCTGCATCTC GCAGAGTCTTGGGAACCTCCCGTTGCAGGTGGTGCCGGGTCTCTGCTCGT GTACCGCTGCGCTGTCGCAAATTGGCTACTCAAGCGCCGAGGCCACTCTT ATGACCGACAAAGACATCATCGAAGCTTTTCCGGGGATCACTGTCGTGCC GACGGATCCGCTTGCTCCCACTTCATTCGAAGGTGCTGCTGAGTGGGTAG CCGCCAAGGCCTGCGAGAAGAAAGGAGCAGGCAGCGATGGTGACGGTGAA TATTTCTCGCGCGTCTTGGCTGTGGGTGAGTGTACACCTATAGACCCCAA CTCCAACCCTAAACCACAAAGCACAACGTTGTTGTTGCTGCTGTTGTTGT TTGCATATTCTTAAACCGTTCCGGTCTCTGGTCAGTACATTCTTAGCGTC CTTACCAGACAAACGACCGGACGCCTACAAAAACGAATCAGTCTTGCTTC TACCTTCCCATCAATTCGTGCACCGTCGCTCCCAACTTCTAGCTACCCTT GTACGGCCTCGATTCTCTTGCTCAAGAGCACACACAGCACTGTTCTTCAG AACTGTACTTCTGGGCCAATCTTTAAGGCTAGAAGCGTCCAGTCGTCCTT TTTTCAGGAATAATCACAACGTAGCCATGTGGGCCCGCTGTGTCTACAGC GAAAAAATCAGCTTTGGCGTCACGAACACATTTCGGCCTTGCTCTACACA AAATGGCCCAATCGGTGGGTCGGCACTGTGGTACTCATCACACCTACCGT CTGTGTTGCGCGTGCCCTCGTCAGGGCACAGAGAGGGCACAAAGGAGATG GCAAGGAAGAACGTACCCACTCCATACTGCTGCATCGGCATATTCAAGGT TGAGGCAGGGGAGGAAAACTCGTACCCGTACGAGTTGCACGACTTGCTAG AGAACACAGGAACGTCGCTCAAATCCAGCGGGGAATCAGCTTACGCGAGG AGTGACAACGAGGAGGGTGATGGCGAGGTAGAAGCCTTGGCCGAGGTAGA AGCCCTGGCCGCAAGGATAGCTGCCCTGAGTGACAACATGAAGGGCCCGA AGATATGTCCACCAGGAACAGGTAGGCAGCCCACAGCAGGGAGTAGCACT GCACGCGGTCTGCAAGCAGGACGATGGGGCAAGGGTGTCGGTCGAAACCC GCAAGAAGAAAAACTACGGGCTCTAGCTCTCCCGTCGTAAATGCAACAAC GATGCGCAAAAAGACCCTGCAGTAATTCCTCCACCACAAATGTTACGTCT CTATGCAAGCATCATCGGCAACTTGCCTTACCACGTCCAGTCCCGGACTT TTCGACACGAAAGCCTCCATGTCGAAAACTAAGCAAGGCAACAGCTGTAG GTGTAGTGGGGCGGGGAAAATATGGTGGAGCAGCAAGTGGAGGCGAGAAA CGTCGAATGAAGCCAACACCGCGGCGAGCCCCTGACATTGACTCCCAGAA AGTCTCCTCTGCCGCGCAAAGAAGGGTGATGTTGTCACCGGCGGTCCTGC ATCTGCGGGTGGTGCTGGGAGAAAGTTGCGCCACCAGGAGATTCTCTTTG TTGTGTGTTTCGATTATTTCGGGAGGGCAGTGCTGGGGACACAAACGACG ACGGCCTTGTACGTTTATGACGGCCTGGGGCGAACAAAGTTGAAACCCGC TTGCGGGATGTTGTTTTCTTGGTGTCTTCAGGGGCAGGGGGTGGGGCAGC AGATGGAACGGGTCGGTAACGCTTCAAACGTTCTTGGGTTTGTGGAGCGA CCCTGAAGAGAGAATATCGACATCTGGGTTAGTGGTTACTCGCAAAATGA CGGCCATCTACTGCTCAAAAGTAAAACCATTCTCCCATGTCGTGCTTCAA CCCACCCTACGTGCTTGCTGGACCTTCAGATCCAAACGGATTATATTTGT AAATCTTCTTTTATCCGGCTTTGGCTACATAGTTCGACCGGCGATGGTTT CCACAGACGCATCCTGTGCGCGCGTACTCACCCACACCATCAACATTACT CTGCATCTACACCGCCTGATGAGCTTCGTGACCGTTGATCGTCGTCCAGG AGTACAAGATGCCGCTCTCGGAGAAACACGCGAGGCTACAGATTCGGAAG TGGAACCTGGAAGTCAGGGTGGACACGGACACGATGCTCAACAAGAAGGT GGCCAGGGCGAGGTGCTTCCCCTGGGCGTGTCAGCAGGGTGAGGTGAGGT ACATGAGTGTGATGGTGACGAGAGAGGTGTCCTGGTTGACCGAGCTGTTG GTCCAGGGCACTGCAGCACGGCCTGGACGACGTATTTCACATGTCACCGT CAAATGCTACCTAATTCAGCCGGTGCTCTAGATATCGTTGGTATTATGCC GATATTGTCGTTTAGATACAAACGACCAGATAAATTGAGGTCGATACAAC GTAAAACACGAACCACCAGACAAGCGTGCACCGCATAGTAGCGAAAATAC GTGATACTTCATCGCATCCCACTCTGGTTGGTGGATTGTGTGTGCCGCTG TGTTCGACGGGAAGTCCGTCTGTCTGCTTATCTACTTTCAGTGGTCCTCC AAGATCGGATTTTGACTCCCTCGAACATTAACATTTCACCCCATGTAAAC AGTGCGACCACTCTTGAAGCTATTTTCCAACAACACTGCTGGGCTCTCTT TGGTACATTCTCCTCCTTCCCTGACCGGCGTTCCACTCCACAAGGTTAAA GGATATACGGTCAGGTTATAACAAACGAACAAAAGTGTCGCTATAACCTT CCCCCCGTCGTCACATTCACTCCGACGGGCAGGATGAAACACCAAGTTAA TCCTTCCCACGCTCTGCTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCA TCTATTCTGTCCCAGGACGAAAACATAGCCCCGGAAGTCCAGAGAGCAGC GACGCCAACGGCTATTGCACAGGGTGCAGCCGGGGTGGCCAGCACCCGGA TCTCTTGGAAAGTCGGTAGCTTCGGGGGACGTTTTGGTCAGGGCAGGTTA CCGCCCAGGAGCAAGAAAGGCTACACGCCTAATCAAGAGGCAGCAAGACC CTCTCCATGAGCTATACCAACACCGGCGACAACAAACTTGCCGAAAATGA GCGTACACCGACAAAGAATGGCCGGACGGTGGCGGAGGCGGCGATAACGA AAACAACGAAAACAGCGCAAAGAGATGACGATGATGGTGGCCAGCACCAA CAGCGGAAGGAACAAGCGAGGACGCGCCAGTGCCTGTGATGCGAATGAGG GTAAGATCGGAAGTTCCGACCCCGATGTAATCGGAGGAGGACAGGCGAGG ACGGATCCCCTGGTGCTCCCTACACAGCAAATGTTGGCAAAATTGGACCG AGGATGACAGTTAGGGTCCCGCTGGTGGTGGAAACCCTGATGATGGGGAT GTTACACTCGTCTGCGTCGGCGGTCAGGGGCGTTTCGCGCCGCCGGAGGG AGCGAATGCCCATGTAGTGTCTGGTGGCGAAAACGTGCTGATTGGCAGCG TGATAAGTACAGCGCGATGAAATCGACC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1365:4793..8970-

>mRNA_E-fasciculatus_F_contig1365.2708.1 ID=mRNA_E-fasciculatus_F_contig1365.2708.1|Name=mRNA_E-fasciculatus_F_contig1365.2708.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=660bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1365:4793..8970- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGCCGCTCTCGGAGAAACACGCGAGGCTACAGATTCGGAAGTGGAACCT
GGAAGTCAGGGTGGACACGGACACGATGCTCAACAAGAAGGTGGCCAGGG
CGAGGTGCTTCCCCTGGGCGTGTCAGCAGGGTGAGATGCCGCTCTCGGAG
AAACACGCGAGGCTACAGATTCGGAAGTGGAACCTGGAAGTCAGGGTGGA
CACGGACACGATGCTCAACAAGAAGGTGGCCAGGGCGAGGTGCTTCCCCT
GGGCGTGTCAGCAGGGTGAGGACGAAAACATAGCCCCGGAAGTCCAGAGA
GCAGCGACGCCAACGGCTATTGCACAGGGTGCAGCCGGGGTGGCCAGCAC
CCGGATCTCTTGGAAAGTCGGTAGCTTCGGGGGACGTTTTGGTCAGGGCA
GGTTACCGCCCAGGAGCAAGAAAGGCTACACGCCTAATCAAGAGGCAGCA
AGACCCTCTCCATGAGACGAAAACATAGCCCCGGAAGTCCAGAGAGCAGC
GACGCCAACGGCTATTGCACAGGGTGCAGCCGGGGTGGCCAGCACCCGGA
TCTCTTGGAAAGTCGGTAGCTTCGGGGGACGTTTTGGTCAGGGCAGGTTA
CCGCCCAGGAGCAAGAAAGGCTACACGCCTAATCAAGAGGCAGCAAGACC
CTCTCCATGA
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